from BMM.workspace import initialize_workspace, rkvs
initialize_workspace()
import json, time
DATA = os.path.join(os.getenv('HOME'), 'Data', 'bucket') + '/'
BMM_CONFIGURATION_LOCATION = '/home/xf06bm/git/BMM-beamline-configuration/'
nas_mount_point = '/mnt/nfs/nas1'
nas_path = os.path.join(nas_mount_point, 'xf06bm', 'experiments', 'XAS',
'snapshots')
from BMM.functions import now, colored, run_report, boxedtext, elapsed_time
from BMM.functions import error_msg, warning_msg, go_msg, url_msg, bold_msg, verbosebold_msg, list_msg, disconnected_msg, info_msg, whisper
run_report(__file__, text='functions and other basics')
run_report('\t' + 'logging')
from BMM.logging import report, BMM_log_info, BMM_msg_hook
from bluesky.preprocessors import finalize_wrapper
run_report('\t' + 'user')
from BMM.user import BMM_User
## old xafs_linxs sample holder
#run_report('\t'+'reference foils')
#from BMM.referencefoils import ReferenceFoils
#foils = ReferenceFoils()
run_report('\t' + 'detector ROIs')
from BMM.rois import ROI, XSROI
import time
from BMM.functions import run_report
run_report(__file__, text='instrument definitions')
TAB = '\t\t\t'
########################################################################
# Note: the use of SynAxis in this file is so that every motor-related #
# symbol gets set to `something' at startup. This allows bsui to #
# fully start and places the user at a fully-functional-for-BMM #
# command line. #
# #
# LOTS of things won't work correctly in this situation. For example, #
# if M2 is disconnected, then anything that wants to touch M2 will not #
# work, e.g. `%w m2' or any kind of coordinated or non-coordinated #
# motion. But this allows one to use and develop BMM's bsui profile #
# even with multiple motors disconnected. #
# #
# The most common causes of a disconnected motor are an IOC that is #
# not running or a controller that is powered down (or both). #
########################################################################
from ophyd.sim import SynAxis
def wait_for_connection(thing):
# give it a moment
count = 0
while thing.connected is False:
count += 1
time.sleep(0.5)
import os
from BMM.functions import run_report
from BMM.user_ns.bmm import BMMuser
run_report(__file__, text='dwelltime')
##############################################################
# ______ _ _ _____ _ _ _____ ________ ___ _____ #
# | _ \ | | | ___| | | | |_ _|_ _| \/ || ___| #
# | | | | | | | |__ | | | | | | | | | . . || |__ #
# | | | | |/\| | __|| | | | | | | | | |\/| || __| #
# | |/ /\ /\ / |___| |____| |____| | _| |_| | | || |___ #
# |___/ \/ \/\____/\_____/\_____/\_/ \___/\_| |_/\____/ #
##############################################################
with_quadem, with_struck, with_dualem, with_xspress3 = True, False, False, True
# An error gets triggered during Azure CI testing that does not get triggered when
# running under IPython. This disables the Xspress3 during testing.
# This is a crude stopgap.
# See https://dev.azure.com/nsls2/profile_collections/_build/results?buildId=2609&view=results
if os.environ.get('AZURE_TESTING'):
with_xspress3 = False
if with_xspress3 is True:
BMMuser.readout_mode = 'xspress3'
from BMM.dwelltime import LockedDwellTimes
from IPython.core.magic import register_line_magic #, register_cell_magic, register_line_cell_magic)
from BMM.functions import run_report
from BMM.user_ns.bmm import BMMuser
run_report(__file__, text='ipython magics for BMM ... general help: %h')
from BMM.prompt import BMM_help, BMM_keys
@register_line_magic
def h(line):
'''BMM help text'''
BMM_help()
return None
@register_line_magic
def k(line):
'''help on ipython keyboard shortcuts'''
BMM_keys()
return None
from BMM.user_ns.utilities import su, show_vacuum, sw
@register_line_magic
def ut(line):
'''show BMM utilities status'''
su()
return None
from BMM.functions import run_report
run_report(__file__, text='Monochromator definitions')
from BMM.user_ns.instruments import wait_for_connection
from BMM.motors import FMBOEpicsMotor, VacuumEpicsMotor, XAFSEpicsMotor, DeadbandEpicsMotor
from BMM.user_ns.motors import mcs8_motors
# see comment at top of BMM/user_ns/instruments.py
from ophyd.sim import SynAxis
TAB = '\t\t\t'
dcm = False
from BMM.dcm import DCM
#from BMM.user_ns.motors import dcm_x
dcm = DCM('XF:06BMA-OP{Mono:DCM1-Ax:', name='dcm', crystal='111')
wait_for_connection(dcm)
print(f'{TAB}FMBO motor group: dcm')
if dcm.connected is True:
if hasattr(dcm.bragg,
'tolerance'): # relevant to Jamie's DeadbandEpicsMotor
dcm.bragg.tolerance.put(0.0001)
dcm_bragg = XAFSEpicsMotor('XF:06BMA-OP{Mono:DCM1-Ax:Bragg}Mtr',
name='dcm_bragg')
dcm_pitch = VacuumEpicsMotor('XF:06BMA-OP{Mono:DCM1-Ax:P2}Mtr',
name='dcm_pitch')
dcm_roll = VacuumEpicsMotor('XF:06BMA-OP{Mono:DCM1-Ax:R2}Mtr',
name='dcm_roll')
from ophyd import EpicsSignalRO
from BMM.functions import run_report, boxedtext
from BMM.functions import error_msg, warning_msg, go_msg, url_msg, bold_msg, verbosebold_msg, list_msg, disconnected_msg, info_msg, whisper
from BMM.utilities import Vacuum, TCG, FEVac, GateValve, Thermocouple, OneWireTC, BMM_DIWater
run_report(__file__, text='monitor utilities')
#############################
# beamline enabled/disabled #
#############################
try:
bl_enabled = EpicsSignalRO('SR:C06-EPS{PLC:1}Sts:BM_BE_Enbl-Sts',
name='enabled')
except:
bl_enabled = 0
#####################
# state of shutters #
#####################
from BMM.user_ns.instruments import shb, bmps, idps
def ocd(text, signal):
'''Indicated open/close/disconnected state with suitable text coloring.
'''
outtext = text
try:
if signal.connected is False:
from BMM.functions import run_report
run_report('\t'+'bsui prompt')
from BMM.prompt import BMMPrompt, BMM_help, BMM_keys
ip = get_ipython()
ip.prompts = BMMPrompt(ip)
# TODO: delete this when 'bluesky_queueserver' is distributed as part of collection environment
def is_re_worker_active():
return False
import os, textwrap
from BMM.functions import run_report, disconnected_msg, error_msg, whisper, boxedtext
from BMM.workspace import rkvs
from BMM import user_ns as user_ns_module
user_ns = vars(user_ns_module)
from BMM.user_ns.bmm import BMM_CONFIGURATION_LOCATION, BMMuser, rois
from BMM.user_ns.motors import mcs8_motors
run_report(__file__, text='import the rest of the things')
run_report('\t' + 'resting state')
from BMM.resting_state import resting_state, resting_state_plan, end_of_macro
run_report('\t' + 'motor status reporting')
from BMM.motor_status import motor_metadata, motor_status, ms, motor_sidebar, xrd_motors, xrdm
run_report('\t' + 'derived plot')
from BMM.derivedplot import close_all_plots, close_last_plot, interpret_click
run_report('\t' + 'suspenders')
from BMM.suspenders import BMM_suspenders, BMM_clear_to_start, BMM_clear_suspenders
run_report('\t' + 'linescan, rocking curve, slit_height, pluck')
from BMM.linescans import linescan, pluck, rocking_curve, slit_height, ls2dat, find_slot, rectangle_scan
from BMM.functions import run_report
from BMM.metadata import TC, Ring
from BMM import user_ns as user_ns_module
user_ns = vars(user_ns_module)
run_report(__file__, text='miscellaneous metadata and the baseline')
first_crystal = TC('XF:06BMA-OP{Mono:DCM-Crys:1}', name='first_crystal')
compton_shield = TC('XF:06BMA-OP{Mono:DCM-Crys:1-Ax:R}', name='compton_shield')
ring = Ring('SR', name='ring')
from BMM.user_ns.dcm import *
from BMM.user_ns.motors import *
from BMM.user_ns.instruments import * #xafs_wheel, xafs_ref, slits2, slits3, m2, m3, xafs_table, m2_bender
user_ns['sd'].baseline = (
xafs_linx,
xafs_liny,
xafs_pitch,
xafs_wheel,
xafs_ref,
xafs_det, #xafs_roll, xafs_linxs, xafs_roth, xafs_rots,
dm3_bct,
dm3_foils,
dm2_fs,
dcm_x,
dcm_pitch,
dcm_roll,
slits3.top,
import os, json
from BMM.functions import run_report
from BMM.user_ns.bmm import BMMuser
from ophyd import EpicsSignal
run_report(__file__, text='detectors and cameras')
with_pilatus = False
##########################################
# _____ ___________ _ _ _____ _ __ #
# / ___|_ _| ___ \ | | / __ \| | / / #
# \ `--. | | | |_/ / | | | / \/| |/ / #
# `--. \ | | | /| | | | | | \ #
# /\__/ / | | | |\ \| |_| | \__/\| |\ \ #
# \____/ \_/ \_| \_|\___/ \____/\_| \_/ #
##########################################
run_report('\t'+'Struck')
from BMM.struck import BMMVortex, GonioStruck, icrs, ocrs
vor = BMMVortex('XF:06BM-ES:1{Sclr:1}', name='vor')
icrs['XF:06BM-ES:1{Sclr:1}.S3'] = vor.channels.chan7
icrs['XF:06BM-ES:1{Sclr:1}.S4'] = vor.channels.chan8
icrs['XF:06BM-ES:1{Sclr:1}.S5'] = vor.channels.chan9
icrs['XF:06BM-ES:1{Sclr:1}.S6'] = vor.channels.chan10
from ophyd.sim import SynAxis
from ophyd import EpicsMotor, EpicsSignalRO
from BMM.functions import run_report, error_msg, warning_msg, bold_msg
import time
run_report(__file__, text='individual motor definitions')
from BMM.motors import FMBOEpicsMotor, XAFSEpicsMotor, VacuumEpicsMotor, EndStationEpicsMotor
TAB = '\t\t\t'
mcs8_motors = list()
## front end slits
print(f'{TAB}Front end slit motor group')
fe_slits_horizontal1 = EpicsMotor('FE:C06B-OP{Slt:1-Ax:Hrz}Mtr',
name='fe_slits_horizontal1')
fe_slits_incline1 = EpicsMotor('FE:C06B-OP{Slt:1-Ax:Inc}Mtr',
name='fe_slits_incline1')
fe_slits_o = EpicsMotor('FE:C06B-OP{Slt:1-Ax:O}Mtr', name='fe_slits_o')
fe_slits_t = EpicsMotor('FE:C06B-OP{Slt:1-Ax:T}Mtr', name='fe_slits_t')
fe_slits_horizontal2 = EpicsMotor('FE:C06B-OP{Slt:2-Ax:Hrz}Mtr',
name='fe_slits_horizontal2')
fe_slits_incline2 = EpicsMotor('FE:C06B-OP{Slt:2-Ax:Inc}Mtr',
name='fe_slits_incline2')
fe_slits_i = EpicsMotor('FE:C06B-OP{Slt:2-Ax:I}Mtr', name='fe_slits_i')
fe_slits_b = EpicsMotor('FE:C06B-OP{Slt:2-Ax:B}Mtr', name='fe_slits_b')
fe_slits_hsize = EpicsSignalRO('FE:C06B-OP{Slt:12-Ax:X}size',
name='fe_slits_hsize')
fe_slits_vsize = EpicsSignalRO('FE:C06B-OP{Slt:12-Ax:Y}size',
name='fe_slits_vsize')