コード例 #1
0
    def __init__(self, obj):
        self.obj = obj
        self.analysis_obj = CfdTools.getActiveAnalysis()
        self.physics_obj = CfdTools.getPhysicsModel(self.analysis_obj)

        ui_path = os.path.join(CfdTools.getModulePath(), 'Gui', "TaskPanelCfdReportingFunctions.ui")
        self.form = FreeCADGui.PySideUic.loadUi(ui_path)

        # Function Object types
        self.form.comboFunctionObjectType.addItems(CfdReportingFunction.OBJECT_NAMES)
        self.form.comboFunctionObjectType.currentIndexChanged.connect(self.comboFunctionObjectTypeChanged)

        self.form.inputReferencePressure.setToolTip("Reference pressure")
        self.form.inputWriteFields.setToolTip("Write output fields")
        self.form.inputCentreOfRotationx.setToolTip("Centre of rotation vector for moments")

        self.form.inputLiftDirectionx.setToolTip("Lift direction vector")
        self.form.inputDragDirectionx.setToolTip("Drag direction vector")
        self.form.inputMagnitudeUInf.setToolTip("Velocity magnitude reference")
        self.form.inputReferenceDensity.setToolTip("Density reference")
        self.form.inputLengthRef.setToolTip("Length reference")
        self.form.inputAreaRef.setToolTip("Area reference")

        self.form.inputNBins.setToolTip("Number of bins")
        self.form.inputDirectionx.setToolTip("Binning direction")
        self.form.inputCumulative.setToolTip("Cumulative")
        self.form.cb_patch_list.setToolTip("Patch (BC) group to monitor")

        self.list_of_bcs = [bc.Label for bc in CfdTools.getCfdBoundaryGroup(self.analysis_obj)]
        self.form.cb_patch_list.addItems(self.list_of_bcs)

        self.load()
        self.updateUI()
コード例 #2
0
ファイル: CfdCaseWriterFoam.py プロジェクト: jaheyns/CfdOF
    def __init__(self, analysis_obj):
        self.case_folder = None
        self.mesh_file_name = None
        self.template_path = None

        self.analysis_obj = analysis_obj
        self.solver_obj = CfdTools.getSolver(analysis_obj)
        self.physics_model = CfdTools.getPhysicsModel(analysis_obj)
        self.mesh_obj = CfdTools.getMesh(analysis_obj)
        self.material_objs = CfdTools.getMaterials(analysis_obj)
        self.bc_group = CfdTools.getCfdBoundaryGroup(analysis_obj)
        self.initial_conditions = CfdTools.getInitialConditions(analysis_obj)
        self.reporting_functions = CfdTools.getReportingFunctionsGroup(
            analysis_obj)
        self.scalar_transport_objs = CfdTools.getScalarTransportFunctionsGroup(
            analysis_obj)
        self.porous_zone_objs = CfdTools.getPorousZoneObjects(analysis_obj)
        self.initialisation_zone_objs = CfdTools.getInitialisationZoneObjects(
            analysis_obj)
        self.zone_objs = CfdTools.getZoneObjects(analysis_obj)
        self.dynamic_mesh_refinement_obj = CfdTools.getDynamicMeshAdaptation(
            analysis_obj)
        self.mesh_generated = False
        self.working_dir = CfdTools.getOutputPath(self.analysis_obj)
        self.progressCallback = None

        self.settings = None
コード例 #3
0
    def setEdit(self, vobj, mode):
        analysis_object = CfdTools.getParentAnalysisObject(self.Object)
        if analysis_object is None:
            CfdTools.cfdErrorBox("No parent analysis object found")
            return False
        physics_model = CfdTools.getPhysicsModel(analysis_object)
        if not physics_model:
            CfdTools.cfdErrorBox("Analysis object must have a physics object")
            return False
        boundaries = CfdTools.getCfdBoundaryGroup(analysis_object)
        material_objs = CfdTools.getMaterials(analysis_object)

        import importlib
        importlib.reload(TaskPanelCfdInitialiseInternalFlowField)
        self.taskd = TaskPanelCfdInitialiseInternalFlowField.TaskPanelCfdInitialiseInternalFlowField(
            self.Object, physics_model, boundaries, material_objs)
        self.taskd.obj = vobj.Object
        FreeCADGui.Control.showDialog(self.taskd)
        return True
コード例 #4
0
    def accept(self):
        FreeCADGui.Selection.removeObserver(self)

        doc = FreeCADGui.getDocument(self.obj.Document)
        doc.resetEdit()

        # Type
        index = self.form.comboFunctionObjectType.currentIndex()
        storeIfChanged(self.obj, 'ReportingFunctionType', 
            CfdReportingFunction.OBJECT_NAMES[self.form.comboFunctionObjectType.currentIndex()])

        bcs = CfdTools.getCfdBoundaryGroup(self.analysis_obj)
        bc = bcs[self.form.cb_patch_list.currentIndex()]
        if (not self.obj.Patch and bc) or (bc and bc.Name != self.obj.Patch.Name):
            FreeCADGui.doCommand("FreeCAD.ActiveDocument.{}.Patch "
                                 "= FreeCAD.ActiveDocument.{}".format(self.obj.Name, bc.Name))

        # Force object
        storeIfChanged(self.obj, 'ReferenceDensity', getQuantity(self.form.inputReferenceDensity))
        storeIfChanged(self.obj, 'ReferencePressure', getQuantity(self.form.inputReferencePressure))
        storeIfChanged(self.obj, 'WriteFields', self.form.inputWriteFields.isChecked())
        centre_of_rotation = FreeCAD.Vector(
            self.form.inputCentreOfRotationx.property("quantity").Value,
            self.form.inputCentreOfRotationy.property("quantity").Value,
            self.form.inputCentreOfRotationz.property("quantity").Value)
        storeIfChanged(self.obj, 'CentreOfRotation', centre_of_rotation)

        # # Coefficient object
        lift_dir = FreeCAD.Vector(
            self.form.inputLiftDirectionx.property("quantity").Value,
            self.form.inputLiftDirectiony.property("quantity").Value,
            self.form.inputLiftDirectionz.property("quantity").Value)
        storeIfChanged(self.obj, 'Lift', lift_dir)
        drag_dir = FreeCAD.Vector(
            self.form.inputDragDirectionx.property("quantity").Value,
            self.form.inputDragDirectiony.property("quantity").Value,
            self.form.inputDragDirectionz.property("quantity").Value)
        storeIfChanged(self.obj, 'Drag', drag_dir)
        storeIfChanged(self.obj, 'MagnitudeUInf', getQuantity(self.form.inputMagnitudeUInf))
        storeIfChanged(self.obj, 'LengthRef', getQuantity(self.form.inputLengthRef))
        storeIfChanged(self.obj, 'AreaRef', getQuantity(self.form.inputAreaRef))

        # # Spatial binning
        storeIfChanged(self.obj, 'NBins', self.form.inputNBins.value())
        bins_direction = FreeCAD.Vector(
            self.form.inputDirectionx.property("quantity").Value,
            self.form.inputDirectiony.property("quantity").Value,
            self.form.inputDirectionz.property("quantity").Value)
        storeIfChanged(self.obj, 'Direction', bins_direction)
        storeIfChanged(self.obj, 'Cumulative', self.form.inputCumulative.isChecked())

        # Probe info
        storeIfChanged(self.obj, 'SampleFieldName', self.form.inputFieldName.text())
        probe_position = FreeCAD.Vector(
            self.form.inputProbeLocx.property("quantity").Value,
            self.form.inputProbeLocy.property("quantity").Value,
            self.form.inputProbeLocz.property("quantity").Value)
        storeIfChanged(self.obj, 'ProbePosition', probe_position)

        # Finalise
        FreeCADGui.doCommand("FreeCAD.ActiveDocument.recompute()")
コード例 #5
0
    def accept(self):
        self.analysis_obj.NeedsMeshRewrite = self.NeedsMeshRewriteOrig
        self.analysis_obj.NeedsCaseRewrite = self.NeedsCaseRewriteOrig

        if self.obj.Label.startswith("CfdFluidBoundary"):
            storeIfChanged(self.obj, 'Label', self.obj.BoundaryType)

        # Type
        if self.obj.BoundaryType != self.BoundaryTypeOrig:
            FreeCADGui.doCommand(
                "FreeCAD.ActiveDocument.{}.BoundaryType = '{}'".format(self.obj.Name, self.obj.BoundaryType))
        if self.obj.BoundarySubType != self.BoundarySubTypeOrig:
            FreeCADGui.doCommand(
                "FreeCAD.ActiveDocument.{}.BoundarySubType = '{}'".format(self.obj.Name, self.obj.BoundarySubType))
        storeIfChanged(self.obj, 'ThermalBoundaryType',
                       CfdFluidBoundary.THERMAL_BOUNDARY_TYPES[self.form.comboThermalBoundaryType.currentIndex()])

        # Velocity
        storeIfChanged(self.obj, 'VelocityIsCartesian', self.form.radioButtonCart.isChecked())
        storeIfChanged(self.obj, 'Ux', getQuantity(self.form.inputCartX))
        storeIfChanged(self.obj, 'Uy', getQuantity(self.form.inputCartY))
        storeIfChanged(self.obj, 'Uz', getQuantity(self.form.inputCartZ))
        storeIfChanged(self.obj, 'VelocityMag', getQuantity(self.form.inputVelocityMag))
        storeIfChanged(self.obj, 'DirectionFace', self.form.lineDirection.text())
        storeIfChanged(self.obj, 'ReverseNormal', self.form.checkReverse.isChecked())
        storeIfChanged(self.obj, 'MassFlowRate', getQuantity(self.form.inputMassFlowRate))
        storeIfChanged(self.obj, 'VolFlowRate', getQuantity(self.form.inputVolFlowRate))

        # Pressure
        storeIfChanged(self.obj, 'Pressure', getQuantity(self.form.inputPressure))

        # Wall
        storeIfChanged(self.obj, 'SlipRatio', getQuantity(self.form.inputSlipRatio))

        # Thermal
        storeIfChanged(self.obj, 'Temperature', getQuantity(self.form.inputTemperature))
        storeIfChanged(self.obj, 'HeatFlux', getQuantity(self.form.inputHeatFlux))
        storeIfChanged(self.obj, 'HeatTransferCoeff', getQuantity(self.form.inputHeatTransferCoeff))

        # Turbulence
        if self.turb_model in CfdFluidBoundary.TURBULENT_INLET_SPEC:
            turb_index = self.form.comboTurbulenceSpecification.currentIndex()
            storeIfChanged(self.obj, 'TurbulenceInletSpecification',
                           CfdFluidBoundary.TURBULENT_INLET_SPEC[self.turb_model][1][turb_index])
        else:
            storeIfChanged(self.obj, 'TurbulenceInletSpecification', self.obj.TurbulenceInletSpecification)
        storeIfChanged(self.obj, 'TurbulentKineticEnergy', getQuantity(self.form.inputKineticEnergy))
        storeIfChanged(self.obj, 'SpecificDissipationRate', getQuantity(self.form.inputSpecificDissipationRate))
        storeIfChanged(self.obj, 'DissipationRate', getQuantity(self.form.inputDissipationRate))
        storeIfChanged(self.obj, 'NuTilda', getQuantity(self.form.inputNuTilda))
        storeIfChanged(self.obj, 'Intermittency', getQuantity(self.form.inputGammaInt))
        storeIfChanged(self.obj, 'ReThetat', getQuantity(self.form.inputReThetat))
        storeIfChanged(self.obj, 'TurbulentViscosity', getQuantity(self.form.inputTurbulentViscosity))
        storeIfChanged(self.obj, 'kEqnTurbulentKineticEnergy', getQuantity(self.form.inputKineticEnergy))
        storeIfChanged(self.obj, 'kEqnTurbulentViscosity', getQuantity(self.form.inputTurbulentViscosity))
        storeIfChanged(self.obj, 'TurbulenceIntensityPercentage', getQuantity(self.form.inputIntensity))
        storeIfChanged(self.obj, 'TurbulenceLengthScale', getQuantity(self.form.inputLengthScale))

        # Multiphase
        storeIfChanged(self.obj, 'VolumeFractions', self.alphas)

        # Porous
        storeIfChanged(self.obj, 'PorousBaffleMethod',
                       CfdFluidBoundary.POROUS_METHODS[self.form.buttonGroupPorous.checkedId()])
        storeIfChanged(self.obj, 'PressureDropCoeff', getQuantity(self.form.inputPressureDropCoeff))
        storeIfChanged(self.obj, 'ScreenWireDiameter', getQuantity(self.form.inputWireDiameter))
        storeIfChanged(self.obj, 'ScreenSpacing', getQuantity(self.form.inputSpacing))

        # Only update references if changed
        if self.obj.ShapeRefs != self.ShapeRefsOrig:
            refstr = "FreeCAD.ActiveDocument.{}.ShapeRefs = [\n".format(self.obj.Name)
            refstr += ',\n'.join(
                "(FreeCAD.ActiveDocument.getObject('{}'), {})".format(ref[0].Name, ref[1]) for ref in self.obj.ShapeRefs)
            refstr += "]"
            FreeCADGui.doCommand(refstr)

        # Default boundary
        defaultBoundary = self.form.checkBoxDefaultBoundary.isChecked()
        storeIfChanged(self.obj, 'DefaultBoundary', defaultBoundary)
        if defaultBoundary:
            # Deactivate previous default boundary, if any
            boundaries = CfdTools.getCfdBoundaryGroup(CfdTools.getParentAnalysisObject(self.obj))
            for b in boundaries:
                if b.Name != self.obj.Name and b.DefaultBoundary:
                    FreeCADGui.doCommand("FreeCAD.ActiveDocument.{}.DefaultBoundary = False".format(b.Name))

        FreeCADGui.doCommand("FreeCAD.ActiveDocument.recompute()")

        doc = FreeCADGui.getDocument(self.obj.Document)
        doc.resetEdit()
コード例 #6
0
    def processRefinements(self):
        """ Process mesh refinements """
        mr_objs = CfdTools.getMeshRefinementObjs(self.mesh_obj)

        cf_settings = self.cf_settings
        cf_settings['MeshRegions'] = {}
        cf_settings['BoundaryLayers'] = {}
        cf_settings['InternalRegions'] = {}
        snappy_settings = self.snappy_settings
        snappy_settings['MeshRegions'] = {}
        snappy_settings['BoundaryLayers'] = {}
        snappy_settings['InternalRegions'] = {}

        # Make list of all faces in meshed shape with original index
        mesh_face_list = list(
            zip(self.mesh_obj.Part.Shape.Faces,
                range(len(self.mesh_obj.Part.Shape.Faces))))

        # Make list of all boundary references
        CfdTools.cfdMessage("Matching boundary patches\n")
        boundary_face_list = []
        bc_group = None
        analysis_obj = CfdTools.getParentAnalysisObject(self.mesh_obj)
        if not analysis_obj:
            analysis_obj = CfdTools.getActiveAnalysis()
        if analysis_obj:
            bc_group = CfdTools.getCfdBoundaryGroup(analysis_obj)
        for bc_id, bc_obj in enumerate(bc_group):
            for ri, ref in enumerate(bc_obj.ShapeRefs):
                try:
                    bf = CfdTools.resolveReference(ref)
                except RuntimeError as re:
                    raise RuntimeError(
                        "Error processing boundary condition {}: {}".format(
                            bc_obj.Label, str(re)))
                for si, s in enumerate(bf):
                    boundary_face_list += [(sf, (bc_id, ri, si))
                                           for sf in s[0].Faces]

        # Match them up to faces in the main geometry
        bc_matched_faces = CfdTools.matchFaces(boundary_face_list,
                                               mesh_face_list)

        # Check for and filter duplicates
        bc_match_per_shape_face = [-1] * len(mesh_face_list)
        for k in range(len(bc_matched_faces)):
            match = bc_matched_faces[k][1]
            prev_k = bc_match_per_shape_face[match]
            if prev_k >= 0:
                nb, ri, si = bc_matched_faces[k][0]
                nb2, ri2, si2 = bc_matched_faces[prev_k][0]
                bc = bc_group[nb]
                bc2 = bc_group[nb2]
                CfdTools.cfdWarning(
                    "Boundary '{}' reference {}:{} also assigned as "
                    "boundary '{}' reference {}:{} - ignoring duplicate\n".
                    format(bc.Label, bc.ShapeRefs[ri][0].Name,
                           bc.ShapeRefs[ri][1][si], bc2.Label,
                           bc.ShapeRefs[ri][0].Name, bc.ShapeRefs[ri][1][si]))
            else:
                bc_match_per_shape_face[match] = k

        # Match relevant mesh regions to the shape being meshed: boundary layer mesh regions for cfMesh,
        # all surface mesh refinements for snappyHexMesh, and extrusion patches for all meshers.
        # For cfMesh, surface mesh refinements are written as separate surfaces so need not be matched
        CfdTools.cfdMessage("Matching mesh refinement regions\n")
        mr_face_list = []
        for mr_id, mr_obj in enumerate(mr_objs):
            if mr_obj.Extrusion or (
                    self.mesh_obj.MeshUtility == 'cfMesh'
                    and not mr_obj.Internal and mr_obj.NumberLayers > 0) or (
                        self.mesh_obj.MeshUtility == 'snappyHexMesh'
                        and not mr_obj.Internal):
                for ri, r in enumerate(mr_obj.ShapeRefs):
                    try:
                        bf = CfdTools.resolveReference(r)
                    except RuntimeError as re:
                        raise RuntimeError(
                            "Error processing mesh refinement {}: {}".format(
                                mr_obj.Label, str(re)))
                    for si, s in enumerate(bf):
                        mr_face_list += [(f, (mr_id, ri, si))
                                         for f in s[0].Faces]

        # Match them up to the primary geometry
        mr_matched_faces = CfdTools.matchFaces(mr_face_list, mesh_face_list)

        # Check for and filter duplicates
        mr_match_per_shape_face = [-1] * len(mesh_face_list)
        for k in range(len(mr_matched_faces)):
            match = mr_matched_faces[k][1]
            prev_k = mr_match_per_shape_face[match]
            if prev_k >= 0:
                nr, ri, si = mr_matched_faces[k][0]
                nr2, ri2, si2 = mr_matched_faces[prev_k][0]
                CfdTools.cfdWarning(
                    "Mesh refinement '{}' reference {}:{} also assigned as "
                    "mesh refinement '{}' reference {}:{} - ignoring duplicate\n"
                    .format(mr_objs[nr].Label,
                            mr_objs[nr].ShapeRefs[ri][0].Name,
                            mr_objs[nr].ShapeRefs[ri][1][si],
                            mr_objs[nr2].Label,
                            mr_objs[nr2].ShapeRefs[ri2][0].Name,
                            mr_objs[nr2].ShapeRefs[ri2][1][si2]))
            else:
                mr_match_per_shape_face[match] = k

        self.patch_faces = []
        self.patch_names = []
        for k in range(len(bc_group) + 1):
            self.patch_faces.append([])
            self.patch_names.append([])
            for l in range(len(mr_objs) + 1):
                self.patch_faces[k].append([])
                self.patch_names[k].append("patch_" + str(k) + "_" + str(l))
        for i in range(len(mesh_face_list)):
            k = bc_match_per_shape_face[i]
            l = mr_match_per_shape_face[i]
            nb = -1
            nr = -1
            if k >= 0:
                nb, bri, bsi = bc_matched_faces[k][0]
            if l >= 0:
                nr, rri, ssi = mr_matched_faces[l][0]
            self.patch_faces[nb + 1][nr + 1].append(i)

        # For gmsh, match mesh refinement with vertices in original mesh
        mr_matched_vertices = []
        if self.mesh_obj.MeshUtility == 'gmsh':
            # Make list of all vertices in meshed shape with original index
            mesh_vertices_list = list(
                zip(self.mesh_obj.Part.Shape.Vertexes,
                    range(len(self.mesh_obj.Part.Shape.Vertexes))))

            CfdTools.cfdMessage("Matching mesh refinements\n")
            mr_vertices_list = []
            for mr_id, mr_obj in enumerate(mr_objs):
                if not mr_obj.Internal:
                    for ri, r in enumerate(mr_obj.ShapeRefs):
                        try:
                            bf = CfdTools.resolveReference(r)
                        except RuntimeError as re:
                            raise RuntimeError(
                                "Error processing mesh refinement {}: {}".
                                format(mr_obj.Label, str(re)))
                        for si, s in enumerate(bf):
                            mr_vertices_list += [(v, (mr_id, ri, si))
                                                 for v in s[0].Vertexes]

            mr_matched_vertices = CfdTools.matchFaces(mr_vertices_list,
                                                      mesh_vertices_list)
            self.ele_length_map = {}
            self.ele_node_map = {}

        # For snappyHexMesh, also match surface mesh refinements to the boundary conditions, to identify boundary
        # conditions on supplementary geometry defined by the surface mesh refinements
        # Also matches baffles to surface mesh refinements
        bc_mr_matched_faces = []
        if self.mesh_obj.MeshUtility == 'snappyHexMesh':
            bc_mr_matched_faces = CfdTools.matchFaces(boundary_face_list,
                                                      mr_face_list)

        # Handle baffles
        for bc_id, bc_obj in enumerate(bc_group):
            if bc_obj.BoundaryType == 'baffle':
                baffle_matches = [
                    m for m in bc_mr_matched_faces if m[0][0] == bc_id
                ]
                mr_match_per_baffle_ref = []
                for r in bc_obj.ShapeRefs:
                    mr_match_per_baffle_ref += [[-1] * len(r[1])]
                for m in baffle_matches:
                    mr_match_per_baffle_ref[m[0][1]][m[0][2]] = m[1][0]
                # For each mesh region, the refs that are part of this baffle
                baffle_patch_refs = [[] for ri in range(len(mr_objs) + 1)]
                for ri, mr in enumerate(mr_match_per_baffle_ref):
                    for si, mri in enumerate(mr_match_per_baffle_ref[ri]):
                        baffle_patch_refs[mri + 1].append(
                            (bc_obj.ShapeRefs[ri][0],
                             (bc_obj.ShapeRefs[ri][1][si], )))

                # Write these geometries
                for ri, refs in enumerate(baffle_patch_refs):
                    try:
                        shape = CfdTools.makeShapeFromReferences(refs)
                    except RuntimeError as re:
                        raise RuntimeError(
                            "Error processing baffle {}: {}".format(
                                bc_obj.Label, str(re)))
                    solid_name = bc_obj.Name + "_" + str(ri)
                    if shape:
                        CfdTools.cfdMessage(
                            "Triangulating baffle {}, section {}\n".format(
                                bc_obj.Label, ri))
                        writeSurfaceMeshFromShape(shape, self.triSurfaceDir,
                                                  solid_name, self.mesh_obj)

                        if ri > 0:  # The parts of the baffle corresponding to a surface mesh region obj
                            mr_obj = mr_objs[ri - 1]
                            refinement_level = CfdTools.relLenToRefinementLevel(
                                mr_obj.RelativeLength)
                            edge_level = CfdTools.relLenToRefinementLevel(
                                mr_obj.RegionEdgeRefinement)
                        else:  # The parts of the baffle with no refinement obj
                            refinement_level = 0
                            edge_level = 0
                        snappy_settings['MeshRegions'][solid_name] = {
                            'RefinementLevel': refinement_level,
                            'EdgeRefinementLevel': edge_level,
                            'MaxRefinementLevel': max(refinement_level,
                                                      edge_level),
                            'Baffle': True
                        }

        for mr_id, mr_obj in enumerate(mr_objs):
            Internal = mr_obj.Internal
            mr_rellen = mr_obj.RelativeLength
            if mr_rellen > 1.0:
                mr_rellen = 1.0
                FreeCAD.Console.PrintError(
                    "The mesh refinement region '{}' should not use a relative length greater "
                    "than unity.\n".format(mr_obj.Name))
            elif mr_rellen < 0.001:
                mr_rellen = 0.001  # Relative length should not be less than 0.1% of base length
                FreeCAD.Console.PrintError(
                    "The mesh refinement region '{}' should not use a relative length smaller "
                    "than 0.001.\n".format(mr_obj.Name))

            if self.mesh_obj.MeshUtility == 'gmsh':
                # Generate element maps for gmsh
                if not Internal:
                    mesh_vertex_idx = [
                        mf[1] for mf in mr_matched_vertices
                        if mf[0][0] == mr_id
                    ]
                    self.ele_length_map[mr_obj.Name] = mr_rellen * self.clmax
                    self.ele_node_map[mr_obj.Name] = mesh_vertex_idx
            else:
                # Find any matches with boundary conditions; mark those matching baffles for removal
                bc_matches = [
                    m for m in bc_mr_matched_faces if m[1][0] == mr_id
                ]
                bc_match_per_mr_ref = []
                for ri, r in enumerate(mr_obj.ShapeRefs):
                    bc_match_per_mr_ref.append([-1] * len(r[1]))
                for m in bc_matches:
                    bc_match_per_mr_ref[m[1][1]][m[1][2]] = -2 if bc_group[
                        m[0][0]].BoundaryType == 'baffle' else m[0][0]

                # Unmatch those in primary geometry
                main_geom_matches = [
                    m for m in mr_matched_faces if m[0][0] == mr_id
                ]
                for m in main_geom_matches:
                    bc_match_per_mr_ref[m[0][1]][m[0][2]] = -1

                # For each boundary, the refs that are part of this mesh region
                mr_patch_refs = [[] for ri in range(len(bc_group) + 1)]
                for ri, m in enumerate(bc_match_per_mr_ref):
                    for si, bci in enumerate(m):
                        if bci > -2:
                            mr_patch_refs[bci + 1].append(
                                (mr_obj.ShapeRefs[ri][0],
                                 (mr_obj.ShapeRefs[ri][1][si], )))

                # Loop over and write the sub-sections of this mesh object
                for bi in range(len(mr_patch_refs)):
                    if len(mr_patch_refs[bi]) and not mr_obj.Extrusion:
                        if bi == 0:
                            mr_patch_name = mr_obj.Name
                        else:
                            mr_patch_name = self.patch_names[bi][mr_id + 1]

                        CfdTools.cfdMessage(
                            "Triangulating mesh refinement region {}, section {}\n"
                            .format(mr_obj.Label, bi))

                        try:
                            shape = CfdTools.makeShapeFromReferences(
                                mr_patch_refs[bi])
                        except RuntimeError as re:
                            raise RuntimeError(
                                "Error processing mesh refinement region {}: {}"
                                .format(mr_obj.Label, str(re)))
                        if shape:
                            writeSurfaceMeshFromShape(shape,
                                                      self.triSurfaceDir,
                                                      mr_patch_name,
                                                      self.mesh_obj)

                        refinement_level = CfdTools.relLenToRefinementLevel(
                            mr_obj.RelativeLength)
                        if self.mesh_obj.MeshUtility == 'cfMesh':
                            if not Internal:
                                cf_settings['MeshRegions'][mr_patch_name] = {
                                    'RefinementLevel':
                                    refinement_level,
                                    'RefinementThickness':
                                    self.scale * Units.Quantity(
                                        mr_obj.RefinementThickness).Value,
                                }
                            else:
                                cf_settings['InternalRegions'][mr_obj.Name] = {
                                    'RefinementLevel':
                                    refinement_level,
                                    'RelativeLength':
                                    mr_rellen * self.clmax * self.scale
                                }

                        elif self.mesh_obj.MeshUtility == 'snappyHexMesh':
                            if not Internal:
                                edge_level = CfdTools.relLenToRefinementLevel(
                                    mr_obj.RegionEdgeRefinement)
                                snappy_settings['MeshRegions'][
                                    mr_patch_name] = {
                                        'RefinementLevel':
                                        refinement_level,
                                        'EdgeRefinementLevel':
                                        edge_level,
                                        'MaxRefinementLevel':
                                        max(refinement_level, edge_level),
                                        'Baffle':
                                        False
                                    }
                            else:
                                snappy_settings['InternalRegions'][
                                    mr_patch_name] = {
                                        'RefinementLevel': refinement_level
                                    }

            # In addition, for cfMesh and SnappyHesMesh, record matched boundary layer patches

            if (self.mesh_obj.MeshUtility == 'cfMesh' or self.mesh_obj.MeshUtility == 'snappyHexMesh') \
                    and mr_obj.NumberLayers > 0 and not Internal and not mr_obj.Extrusion:

                for k in range(len(self.patch_faces)):
                    if len(self.patch_faces[k][mr_id + 1]):
                        # Limit expansion ratio to greater than 1.0 and less than 1.2
                        expratio = mr_obj.ExpansionRatio
                        expratio = min(1.2, max(1.0, expratio))

                        if self.mesh_obj.MeshUtility == 'cfMesh':
                            cf_settings['BoundaryLayers'][self.patch_names[k][mr_id + 1]] = \
                            {
                                'NumberLayers': mr_obj.NumberLayers,
                                'ExpansionRatio': expratio,
                                'FirstLayerHeight': self.scale * Units.Quantity(mr_obj.FirstLayerHeight).Value
                            }
                        elif self.mesh_obj.MeshUtility == 'snappyHexMesh':
                            snappy_settings['BoundaryLayers'][self.patch_names[k][mr_id + 1]] = \
                            {
                                'NumberLayers': mr_obj.NumberLayers,
                                'ExpansionRatio': expratio,
                                # 'FinalLayerHeight': self.scale * Units.Quantity(mr_obj.FinalLayerHeight).Value
                            }