def submit_batch_for_peds_scan(self):
self.exportLocalPars()
if not self.job_can_be_submitted(self.job_id_scan_str,
self.time_scan_job_submitted, 'scan'):
return
self.time_scan_job_submitted = gu.get_time_sec()
cfg.make_psana_cfg_file_for_peds_scan()
command = 'psana -c ' + fnm.path_peds_scan_psana_cfg(
) + ' ' + fnm.path_to_xtc_files_for_run() # fnm.path_dark_xtc_cond()
queue = self.queue.value()
bat_log_file = fnm.path_peds_scan_batch_log()
#print 'command :', command
#print 'queue :', queue
#print 'bat_log_file:', bat_log_file
self.job_id_scan_str, out, err = gu.batch_job_submit(
command, queue, bat_log_file)
self.procDarkStatus ^= 1 # set bit to 1
if err != '':
self.stop_auto_processing(is_stop_on_button_click=False)
logger.warning(
'Autoprocessing for run %s is stopped due to batch submission error!!!'
% self.str_run_number, __name__)
def command_for_peds_scan(self) :
cfg.make_psana_cfg_file_for_peds_scan()
#command = 'env'
command = 'psana -c ' + fnm.path_peds_scan_psana_cfg() + self.opt
command_seq = command.split()
msg = 'Scan xtc file(s) using command:\n%s' % command \
+ '\nand save results in the log-file: %s' % fnm.path_peds_scan_batch_log()
logger.info(msg, __name__)
err = gu.subproc_in_log(command_seq, fnm.path_peds_scan_batch_log()) # , shell=True)
if err != '' :
logger.error('\nerr: %s' % (err), __name__)
self.stop_auto_processing(is_stop_on_button_click=False)
logger.warning('Autoprocessing for run %s is stopped due to error at execution of the scan command' % self.str_run_number, __name__)
else :
logger.info('Scan for run %s is completed' % self.str_run_number, __name__)
def command_for_peds_scan(self) :
cfg.make_psana_cfg_file_for_peds_scan()
#command = 'env'
command = 'psana -c ' + fnm.path_peds_scan_psana_cfg() + self.opt
command_seq = command.split()
msg = 'Scan xtc file(s) using command:\n%s' % command \
+ '\nand save results in the log-file: %s' % fnm.path_peds_scan_batch_log()
logger.info(msg, __name__)
err = gu.subproc_in_log(command_seq, fnm.path_peds_scan_batch_log()) # , shell=True)
if err != '' :
logger.error('\nerr: %s' % (err), __name__)
self.stop_auto_processing(is_stop_on_button_click=False)
logger.warning('Autoprocessing for run %s is stopped due to error at execution of the scan command' % self.str_run_number, __name__)
else :
logger.info('Scan for run %s is completed' % self.str_run_number, __name__)
def submit_batch_for_peds_scan(self) :
self.exportLocalPars()
if not self.job_can_be_submitted(self.job_id_scan_str, self.time_scan_job_submitted, 'scan') : return
self.time_scan_job_submitted = gu.get_time_sec()
cfg.make_psana_cfg_file_for_peds_scan()
command = 'psana -c ' + fnm.path_peds_scan_psana_cfg() + ' ' + fnm.path_to_xtc_files_for_run() # fnm.path_dark_xtc_cond()
queue = self.queue.value()
bat_log_file = fnm.path_peds_scan_batch_log()
#print 'command :', command
#print 'queue :', queue
#print 'bat_log_file:', bat_log_file
self.job_id_scan_str, out, err = gu.batch_job_submit(command, queue, bat_log_file)
self.procDarkStatus ^= 1 # set bit to 1
if err != '' :
self.stop_auto_processing(is_stop_on_button_click=False)
logger.warning('Autoprocessing for run %s is stopped due to batch submission error!!!' % self.str_run_number, __name__)
def make_psana_cfg_file_for_peds_scan(self) :
cfg.make_psana_cfg_file_for_peds_scan()
def make_psana_cfg_file_for_peds_scan(self):
cfg.make_psana_cfg_file_for_peds_scan()
