def __init__(self, ssh=None, address=None, username=None, password=None, name='RaccoonSshClient_server',
debug=False, usesyshostkeys=True, autoaddmissingkeys=True, pkey=None, autoconnect=True):
## , # XXX
## files=None, path = None, targetname = 'tmpfile', compression='gz'):
# files, path, targetname and compression shuold be
# moved to the respective functions upload() and download()
DebugObj.__init__(self, debug)
if ssh:
self.dprint("parent SSH connection provided: [%s]" % ssh)
self.ssh = ssh
else:
self.dprint("open new SSH connection...")
self.ssh = RaccoonSshClient(address, username, password, name, debug,
usesyshostkeys, autoaddmissingkeys, pkey, autoconnect)
self.dprint("SSH connection open [%s]" % self.ssh)
self._ready = False
self._counter = 0.
self._total = 0.
self._STOP = False
self._running = False
self.pending = None
self._status = { 'completed' : False, 'error': None }
self.test()
def __init__(self, server, name="noname", _format="pdbqt", info=None, debug=False):
DebugObj.__init__(self, debug)
self.dprint("init class")
self.server = server
self.items = {}
# NOTE this variable is set automatically
# by self.upload() and self._readIndex()
self.path = None
self.options = {"split": 1000} # create sub-directories each N ligs
self.ready = False
self.info = {
"name": name,
"count": 0,
"date": None,
"format": _format,
"index_file": None,
"comments": "",
"properties": {},
"type": None,
}
self.filters = {}
if info:
self.info = info
# restore the library obj from an index file
if self.info["index_file"]:
self._readIndex()
def __init__(self, server, name = 'noname', _format = 'pdbqt', info = None, debug=False):
DebugObj.__init__(self, debug)
self.dprint("init class")
self.server = server
self.items = {}
# NOTE this variable is set automatically
# by self.upload() and self._readIndex()
self.path = None
self.options = { 'split' : 1000, # create sub-directories each N ligs
}
self.ready = False
self.info = { 'name' : name,
'count' : 0,
'date' : None,
'format' : _format,
'index_file': None,
'comments': "",
'properties' : {},
'type' : None,
}
self.filters = {}
if info:
self.info = info
# restore the library obj from an index file
if self.info['index_file']:
self._readIndex()
def __init__(self, ssh=None, address=None, username=None, password=None, name='RaccoonSshClient_server',
debug=False, usesyshostkeys=True, autoaddmissingkeys=True, pkey=None, autoconnect=True):
## , # XXX
## files=None, path = None, targetname = 'tmpfile', compression='gz'):
# files, path, targetname and compression shuold be
# moved to the respective functions upload() and download()
DebugObj.__init__(self, debug)
if ssh:
self.dprint("parent SSH connection provided: [%s]" % ssh)
self.ssh = ssh
else:
self.dprint("open new SSH connection...")
self.ssh = RaccoonSshClient(address, username, password, name, debug,
usesyshostkeys, autoaddmissingkeys, pkey, autoconnect)
self.dprint("SSH connection open [%s]" % self.ssh)
self._ready = False
self._counter = 0.
self._total = 0.
self._STOP = False
self._running = False
self.pending = None
self._status = { 'completed' : False, 'error': None }
self.test()
def __init__(self, address=None, username=None, password=None, name='RaccoonSshClient_server',
debug=False, usesyshostkeys=True, autoaddmissingkeys=True,
pkey=None, autoconnect=False):
DebugObj.__init__(self, debug)
self.autoaddmissingkeys = autoaddmissingkeys
self.usesyshostkeys = usesyshostkeys
self.address = address
self.username = username
self.password = password
self.name = name
self.pkey = pkey
self.connection = None
self.connectiontime = None
if autoconnect:
self.openconnection()
def __init__(self, address=None, username=None, password=None, name='RaccoonSshClient_server',
debug=False, usesyshostkeys=True, autoaddmissingkeys=True,
pkey=None, autoconnect=False):
DebugObj.__init__(self, debug)
self.autoaddmissingkeys = autoaddmissingkeys
self.usesyshostkeys = usesyshostkeys
self.address = address
self.username = username
self.password = password
self.name = name
self.pkey = pkey
self.connection = None
self.connectiontime = None
if autoconnect:
self.openconnection()