def complete_initialization(app): app.beamline = hwr.getHardwareObject(cmdline_options.beamline_setup) app.session = app.beamline.getObjectByRole("session") app.collect = app.beamline.getObjectByRole("collect") Utils.enable_snapshots(app.collect) app.diffractometer = app.beamline.getObjectByRole("diffractometer") if getattr(app.diffractometer, 'centring_motors_list', None) is None: # centring_motors_list is the list of roles corresponding to diffractometer motors app.diffractometer.centring_motors_list = app.diffractometer.getPositions().keys() app.db_connection = app.beamline.getObjectByRole("lims_client") app.empty_queue = pickle.dumps(hwr.getHardwareObject(cmdline_options.queue_model)) app.sample_changer = app.beamline.getObjectByRole("sample_changer") app.rest_lims = app.beamline.getObjectByRole("lims_rest_client") app.queue = qutils.new_queue() try: SampleCentring.init_signals() SampleChanger.init_signals() Beamline.init_signals() except Exception: sys.excepthook(*sys.exc_info())
def complete_initialization(app): app.beamline = hwr.getHardwareObject(cmdline_options.beamline_setup) app.session = app.beamline.getObjectByRole("session") app.collect = app.beamline.getObjectByRole("collect") Utils.enable_snapshots(app.collect) app.diffractometer = app.beamline.getObjectByRole("diffractometer") if getattr(app.diffractometer, 'centring_motors_list', None) is None: # centring_motors_list is the list of roles corresponding to diffractometer motors app.diffractometer.centring_motors_list = app.diffractometer.getPositions( ).keys() app.db_connection = app.beamline.getObjectByRole("lims_client") app.empty_queue = pickle.dumps( hwr.getHardwareObject(cmdline_options.queue_model)) app.sample_changer = app.beamline.getObjectByRole("sample_changer") app.rest_lims = app.beamline.getObjectByRole("lims_rest_client") app.queue = qutils.new_queue() try: SampleCentring.init_signals() SampleChanger.init_signals() Beamline.init_signals() except Exception: sys.excepthook(*sys.exc_info())
def complete_initialization(app): app.beamline = get_hardware_object(hwr, cmdline_options.beamline_setup) app.xml_rpc_server = get_hardware_object(hwr, 'xml-rpc-server') app.actions = hwr.getHardwareObject(cmdline_options.beamline_actions) app.plotting = hwr.getHardwareObject(cmdline_options.plotting) app.session = get_hardware_object(app.beamline, "session") app.collect = get_hardware_object(app.beamline, "collect") app.workflow = get_hardware_object(app.beamline, "workflow") app.shapes = get_hardware_object(app.beamline, "shape_history") app.diffractometer = get_hardware_object(app.beamline, "diffractometer") app.db_connection = get_hardware_object(app.beamline, "lims_client") app.sample_changer = get_hardware_object(app.beamline, "sample_changer") app.sc_maintenance = get_hardware_object(app.beamline, "sample_changer_maintenance") app.rest_lims = get_hardware_object(app.beamline, "lims_rest_client") Utils.enable_snapshots(app.collect) init_app_state(app) init_sample_video(app) try: SampleCentring.init_signals() SampleChanger.init_signals() Beamline.init_signals() Diffractometer.init_signals() except Exception: sys.excepthook(*sys.exc_info()) INIT_EVENT.set()
def complete_initialization(app): app.beamline = hwr.getHardwareObject(cmdline_options.beamline_setup) app.xml_rpc_server = hwr.getHardwareObject('xml-rpc-server') app.session = app.beamline.getObjectByRole("session") app.collect = app.beamline.getObjectByRole("collect") app.workflow = app.beamline.getObjectByRole("workflow") app.shapes = app.beamline.getObjectByRole("shape_history") Utils.enable_snapshots(app.collect) app.diffractometer = app.beamline.getObjectByRole("diffractometer") if getattr(app.diffractometer, 'centring_motors_list', None) is None: # centring_motors_list is the list of roles corresponding to diffractometer motors app.diffractometer.centring_motors_list = app.diffractometer.getPositions().keys() app.db_connection = app.beamline.getObjectByRole("lims_client") app.empty_queue = pickle.dumps(hwr.getHardwareObject(cmdline_options.queue_model)) app.sample_changer = app.beamline.getObjectByRole("sample_changer") app.sc_maintenance = app.beamline.getObjectByRole("sample_changer_maintenance") app.rest_lims = app.beamline.getObjectByRole("lims_rest_client") app.queue = qutils.new_queue() app.actions = hwr.getHardwareObject(cmdline_options.beamline_actions) app.plotting = hwr.getHardwareObject(cmdline_options.plotting) # SampleID of currently mounted sample app.CURRENTLY_MOUNTED_SAMPLE = None app.SAMPLE_TO_BE_MOUNTED = '' app.AUTO_MOUNT_SAMPLE = False app.AUTO_ADD_DIFFPLAN = False app.CENTRING_METHOD = CENTRING_METHOD.LOOP app.NUM_SNAPSHOTS = app.collect.getProperty('num_snapshots', 4) app.NODE_ID_TO_LIMS_ID = {} app.INITIAL_FILE_LIST = [] app.SC_CONTENTS = {"FROM_CODE": {}, "FROM_LOCATION": {}} app.SAMPLE_LIST = {"sampleList": {}, 'sampleOrder': []} app.TEMP_DISABLED = [] # set up streaming from mxcube3.video import streaming try: streaming.init(app.diffractometer.camera, cmdline_options.video_device) except RuntimeError as ex: logging.getLogger('HWR').info(str(ex)) app.VIDEO_DEVICE = None else: app.VIDEO_DEVICE = cmdline_options.video_device try: SampleCentring.init_signals() SampleChanger.init_signals() Beamline.init_signals() Diffractometer.init_signals() except Exception: sys.excepthook(*sys.exc_info()) logging.getLogger("HWR").info("MXCuBE 3 initialized, it took %.1f seconds" % (time.time() - t0))
def complete_initialization(app): app.beamline = hwr.getHardwareObject(cmdline_options.beamline_setup) app.session = app.beamline.getObjectByRole("session") app.collect = app.beamline.getObjectByRole("collect") app.diffractometer = app.beamline.getObjectByRole("diffractometer") app.db_connection = app.beamline.getObjectByRole("lims_client") app.empty_queue = jsonpickle.encode(hwr.getHardwareObject(cmdline_options.queue_model)) app.sample_changer = app.beamline.getObjectByRole("sample_changer") try: routes.SampleCentring.init_signals() except Exception: sys.excepthook(*sys.exc_info())
def init_app_state(app): from queue_entry import CENTRING_METHOD # SampleID of currently mounted sample app.CURRENTLY_MOUNTED_SAMPLE = None app.SAMPLE_TO_BE_MOUNTED = '' app.CENTRING_METHOD = CENTRING_METHOD.LOOP app.NODE_ID_TO_LIMS_ID = {} app.INITIAL_FILE_LIST = [] app.SC_CONTENTS = {"FROM_CODE": {}, "FROM_LOCATION": {}} app.SAMPLE_LIST = {"sampleList": {}, 'sampleOrder': []} app.TEMP_DISABLED = [] app.USERS = {} qutils.init_queue_settings() app.ALLOW_REMOTE = cmdline_options.allow_remote app.TIMEOUT_GIVES_CONTROL = cmdline_options.ra_timeout app.empty_queue = pickle.dumps( hwr.getHardwareObject(cmdline_options.queue_model)) app.queue = qutils.new_queue()