class EmbeddedVelocityInletEmulationTest(UnitTest.TestCase):
def testEmbeddedVelocityInletEmulationSymbolic2D(self):
self.print_output = False
self.check_tolerance = 1.0e-10
self.print_reference_values = False
self.work_folder = "EmbeddedVelocityInletEmulationTest"
self.reference_file = "reference_embedded_symbolic_navier_stokes"
self.settings = "EmbeddedVelocityInletEmulationTest.json"
self.formulation_settings = KratosMultiphysics.Parameters(r'''{
"element_type" : "embedded_symbolic_navier_stokes",
"is_slip" : false,
"slip_length" : 1.0e8,
"penalty_coefficient" : 10.0,
"dynamic_tau" : 1.0
}''')
self.ExecuteTest()
def testEmbeddedVelocityInletEmulationEmbedded2D(self):
self.print_output = False
self.check_tolerance = 1.0e-10
self.print_reference_values = False
self.work_folder = "EmbeddedVelocityInletEmulationTest"
self.reference_file = "reference_embedded_navier_stokes"
self.settings = "EmbeddedVelocityInletEmulationTest.json"
self.formulation_settings = KratosMultiphysics.Parameters(r'''{
"element_type": "embedded_navier_stokes",
"is_slip": false,
"slip_length": 1.0e8,
"penalty_coefficient": 10.0,
"dynamic_tau": 1.0
}''')
self.ExecuteTest()
def ExecuteTest(self):
self.buildSimulation()
self.runTest()
self.tearDown()
self.checkResults()
def buildSimulation(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
with open(self.settings, 'r') as parameter_file:
self.ProjectParameters = KratosMultiphysics.Parameters(
parameter_file.read())
self.ProjectParameters["solver_settings"][
"formulation"] = self.formulation_settings
if self.print_output:
self.ProjectParameters[
"output_processes"] = self._get_output_process_settings(
)
self.model = KratosMultiphysics.Model()
self.simulation = FluidDynamicsAnalysis(self.model,
self.ProjectParameters)
def runTest(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
self.simulation.Initialize()
self._set_inlet_emulation_simulation()
self.simulation.RunSolutionLoop()
self.simulation.Finalize()
def checkResults(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
## 2D results check
main_model_part = self.simulation._GetSolver().main_model_part
if (main_model_part.ProcessInfo[KratosMultiphysics.DOMAIN_SIZE] ==
2):
if self.print_reference_values:
with open(self.reference_file + '.csv', 'w') as ref_file:
ref_file.write(
"#ID, VELOCITY_X, VELOCITY_Y, PRESSURE\n")
for node in main_model_part.Nodes:
vel = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY, 0)
pres = node.GetSolutionStepValue(
KratosMultiphysics.PRESSURE, 0)
ref_file.write("{0}, {1}, {2}, {3}\n".format(
node.Id, vel[0], vel[1], pres))
else:
with open(self.reference_file + '.csv',
'r') as reference_file:
reference_file.readline() # skip header
line = reference_file.readline()
for node in main_model_part.Nodes:
values = [
float(i) for i in line.rstrip('\n ').split(',')
]
reference_vel_x = values[1]
reference_vel_y = values[2]
reference_pres = values[3]
velocity = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY)
pressure = node.GetSolutionStepValue(
KratosMultiphysics.PRESSURE)
self.assertAlmostEqual(reference_vel_x,
velocity[0],
delta=self.check_tolerance)
self.assertAlmostEqual(reference_vel_y,
velocity[1],
delta=self.check_tolerance)
self.assertAlmostEqual(reference_pres,
pressure,
delta=self.check_tolerance)
line = reference_file.readline()
if line != '': # If we did not reach the end of the reference file
self.fail(
"The number of nodes in the mdpa is smaller than the number of nodes in the output file"
)
def tearDown(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
KratosUtilities.DeleteFileIfExisting(
self.ProjectParameters["solver_settings"]
["model_import_settings"]["input_filename"].GetString() +
'.time')
def _set_inlet_emulation_simulation(self):
main_model_part = self.simulation._GetSolver().main_model_part
# Set distance field
x_level_set = 2.5
for node in main_model_part.Nodes:
node.SetSolutionStepValue(KratosMultiphysics.DISTANCE,
node.X - x_level_set)
# Set embedded velocity in cut elements and deactivate negative distance elements
embedded_velocity = KratosMultiphysics.Vector(3)
embedded_velocity[0] = 1.0
embedded_velocity[1] = 0.0
embedded_velocity[2] = 0.0
deactivate_negative_elems = True
for elem in main_model_part.Elements:
n_pos = 0
n_neg = 0
for node in elem.GetNodes():
if node.GetSolutionStepValue(
KratosMultiphysics.DISTANCE) < 0.0:
n_neg += 1
else:
n_pos += 1
if (n_neg != 0 and n_pos != 0):
for node in elem.GetNodes():
node.SetValue(KratosMultiphysics.EMBEDDED_VELOCITY,
embedded_velocity)
elif (n_neg == len(elem.GetNodes()) and deactivate_negative_elems):
elem.Set(KratosMultiphysics.ACTIVE, False)
def _get_output_process_settings(self):
return KratosMultiphysics.Parameters(r'''{
"gid_output" : [{
"python_module" : "gid_output_process",
"kratos_module" : "KratosMultiphysics",
"process_name" : "GiDOutputProcess",
"help" : "This process writes postprocessing files for GiD",
"Parameters" : {
"model_part_name" : "FluidModelPart.fluid_computational_model_part",
"output_name" : "embedded_velocity_inlet_emulation_test",
"postprocess_parameters" : {
"result_file_configuration" : {
"gidpost_flags" : {
"GiDPostMode" : "GiD_PostBinary",
"WriteDeformedMeshFlag" : "WriteDeformed",
"WriteConditionsFlag" : "WriteConditions",
"MultiFileFlag" : "SingleFile"
},
"file_label" : "time",
"output_control_type" : "step",
"output_frequency" : 1.0,
"body_output" : true,
"node_output" : false,
"skin_output" : false,
"plane_output" : [],
"nodal_results" : ["VELOCITY","PRESSURE","DISTANCE"],
"gauss_point_results" : []
},
"point_data_configuration" : []
}
}
}]
}''')
class EmbeddedReservoirDiscontinuousTest(UnitTest.TestCase):
def testEmbeddedReservoirDiscontinuous3D(self):
self.distance = 0.99
self.slip_level_set = True
self.work_folder = "EmbeddedReservoirDiscontinuousTest"
self.reference_file = "reference_embedded_reservoir_discontinuous_3D"
self.settings = "EmbeddedReservoirDiscontinuous3DTestParameters.json"
self.ExecuteEmbeddedReservoirTest()
def ExecuteEmbeddedReservoirTest(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
self.setUp()
self.setUpProblem()
self.runTest()
self.tearDown()
self.checkResults()
def setUp(self):
self.check_tolerance = 1.0e-8
self.print_output = False
self.print_reference_values = False
def tearDown(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
KratosUtilities.DeleteFileIfExisting(
self.ProjectParameters["solver_settings"]
["model_import_settings"]["input_filename"].GetString() +
'.time')
def setUpProblem(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
with open(self.settings, 'r') as parameter_file:
self.ProjectParameters = KratosMultiphysics.Parameters(
parameter_file.read())
self.Model = KratosMultiphysics.Model()
self.simulation = FluidDynamicsAnalysis(self.Model,
self.ProjectParameters)
def setUpDistanceField(self):
# Get the model part containing the domain
fluid_model_part = self.simulation._GetSolver().main_model_part
# Set continuous distance field
for node in fluid_model_part.Nodes:
d = self.distance - node.Z
node.SetSolutionStepValue(KratosMultiphysics.DISTANCE, d)
# Set discontinuous distance field
for element in fluid_model_part.Elements:
i_node = 0
elem_dist = KratosMultiphysics.Vector(4)
for node in element.GetNodes():
elem_dist[i_node] = node.GetSolutionStepValue(
KratosMultiphysics.DISTANCE)
i_node += 1
element.SetValue(KratosMultiphysics.ELEMENTAL_DISTANCES, elem_dist)
def setUpInitialCondition(self):
# Set exact initial solution
v_zero = KratosMultiphysics.Vector(3, 0.0)
for node in self.simulation._GetSolver().main_model_part.Nodes:
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY, 0, v_zero)
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY, 1, v_zero)
node.SetSolutionStepValue(KratosMultiphysics.VELOCITY, 2, v_zero)
if node.GetSolutionStepValue(KratosMultiphysics.DISTANCE) < 0.0:
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 0,
1.0e+06)
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 1,
1.0e+06)
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 2,
1.0e+06)
else:
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 0, 0.0)
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 1, 0.0)
node.SetSolutionStepValue(KratosMultiphysics.PRESSURE, 2, 0.0)
def runTest(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
# Set up the test
self.simulation.Initialize()
self.setUpDistanceField()
self.setUpInitialCondition()
# Run the test
self.simulation.RunSolutionLoop()
# Finalize the test
self.simulation.Finalize()
def checkResults(self):
with UnitTest.WorkFolderScope(self.work_folder, __file__):
fluid_model_part = self.simulation._GetSolver().main_model_part
if self.print_reference_values:
with open(self.reference_file + '.csv', 'w') as ref_file:
ref_file.write(
"#ID, PRESSURE, VELOCITY_X, VELOCITY_Y, VELOCITY_Z\n")
for node in fluid_model_part.Nodes:
pres = node.GetSolutionStepValue(
KratosMultiphysics.PRESSURE)
v_x = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_X)
v_y = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_Y)
v_z = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_Z)
ref_file.write("{0}, {1}, {2}, {3}, {4}\n".format(
node.Id, pres, v_x, v_y, v_z))
else:
with open(self.reference_file + '.csv', 'r') as reference_file:
reference_file.readline() # skip header
line = reference_file.readline()
for node in fluid_model_part.Nodes:
values = [
float(i) for i in line.rstrip('\n ').split(',')
]
reference_pres = values[1]
reference_v_x = values[2]
reference_v_y = values[3]
reference_v_z = values[4]
pres = node.GetSolutionStepValue(
KratosMultiphysics.PRESSURE)
v_x = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_X)
v_y = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_Y)
v_z = node.GetSolutionStepValue(
KratosMultiphysics.VELOCITY_Z)
self.assertAlmostEqual(reference_v_x,
v_x,
delta=self.check_tolerance)
self.assertAlmostEqual(reference_v_y,
v_y,
delta=self.check_tolerance)
self.assertAlmostEqual(reference_v_z,
v_z,
delta=self.check_tolerance)
self.assertAlmostEqual(reference_pres,
pres,
delta=self.check_tolerance)
line = reference_file.readline()
if line != '': # If we did not reach the end of the reference file
self.fail(
"The number of nodes in the mdpa is smaller than the number of nodes in the output file"
)
class TestSerializer(KratosUnittest.TestCase):
def _prepare_test(self):
# Define a model and load the parameters
self.pre_serialized_model = KratosMultiphysics.Model()
with open(
GetFilePath(
"auxiliar_files_for_python_unittest/parameters_files/test_serializer.json"
), 'r') as parameter_file:
parameters = KratosMultiphysics.Parameters(parameter_file.read())
file_name = parameters["solver_settings"]["model_import_settings"][
"input_filename"].GetString()
parameters["solver_settings"]["model_import_settings"][
"input_filename"].SetString(GetFilePath(file_name))
# First the model is initialized
self.pre_serialized_simulation = FluidDynamicsAnalysis(
self.pre_serialized_model, parameters)
self.pre_serialized_simulation.Initialize()
# Before serializing the model, main model part is set to RESTARTED
self.main_model_part_name = parameters["solver_settings"][
"model_part_name"].GetString()
self.pre_serialized_model.GetModelPart(
self.main_model_part_name).ProcessInfo.SetValue(
KratosMultiphysics.IS_RESTARTED, True)
serialized_model = KratosMultiphysics.StreamSerializer()
serialized_model.Save("ModelSerialization", self.pre_serialized_model)
with open(
GetFilePath(
"auxiliar_files_for_python_unittest/parameters_files/test_serializer.json"
), 'r') as parameter_file:
self.project_parameters = KratosMultiphysics.Parameters(
parameter_file.read())
# Parameters are read again and input type set to use_input_model_part since the serialized model already has the mdpa loaded
self.project_parameters["solver_settings"]["model_import_settings"][
"input_type"].SetString("use_input_model_part")
# Deserialize and store the new model
self.current_model = KratosMultiphysics.Model()
serialized_model.Load("ModelSerialization", self.current_model)
def _check_results(self):
pre_serialized_model_part = self.pre_serialized_model.GetModelPart(
self.main_model_part_name)
pre_serialized_pressure_results = [
node.GetSolutionStepValue(KratosMultiphysics.PRESSURE)
for node in pre_serialized_model_part.Nodes
]
pre_serialized_velocity_results = [
node.GetSolutionStepValue(KratosMultiphysics.VELOCITY)
for node in pre_serialized_model_part.Nodes
]
serialized_model_part = self.current_model.GetModelPart(
self.main_model_part_name)
serialized_pressure_results = [
node.GetSolutionStepValue(KratosMultiphysics.PRESSURE)
for node in serialized_model_part.Nodes
]
serialized_velocity_results = [
node.GetSolutionStepValue(KratosMultiphysics.VELOCITY)
for node in serialized_model_part.Nodes
]
# Comparing results before and after serializing
for pre_serialized_result, serialized_result in zip(
pre_serialized_pressure_results, serialized_pressure_results):
self.assertAlmostEqual(pre_serialized_result, serialized_result)
for pre_serialized_result, serialized_result in zip(
pre_serialized_velocity_results, serialized_velocity_results):
for value_pre_seralized, value_serialized in zip(
pre_serialized_result, serialized_result):
self.assertAlmostEqual(value_pre_seralized, value_serialized)
@KratosUnittest.skipUnless(dependencies_are_available,
"FluidDynamicsApplication is not available")
def test_serializer_fluid_analysis(self):
self._prepare_test()
# Solving simulation before serializing to later check the results
self.pre_serialized_simulation.RunSolutionLoop()
self.pre_serialized_simulation.Finalize()
# Solving simulation after serializing
self.serialized_simulation = FluidDynamicsAnalysis(
self.current_model, self.project_parameters)
self.serialized_simulation.Run()
self._check_results()