def testBuildingTaxaBasedInteractionsSmall(): WebObj = getSupportingSmallWebObj() mca = MedeinaCumulativeApplication("dir") expected = { "acinonyx jubatus": { "panthera leo": [4] }, "panthera tigris": { "acinonyx jubatus": [3], "puma concolor": [2] }, "puma concolor": { "ursus arctos": [1] }, } assert mca.buildTaxaBasedInteractions(WebObj, "species") == expected
def testBuildingTaxaBasedInteractionsInvalid(): WebObj = getSupportingInvalidNamesWebObj() mca = MedeinaCumulativeApplication("dir") expected = {"panthera tigris": {"puma concolor": [2]}} assert mca.buildTaxaBasedInteractions(WebObj, "species") == expected assert IDTRACKER in WebObj.interactions
def testBuildingTaxaBasedInteractionsLarge(): WebObj = getSupportingLargeWebObj() mca = MedeinaCumulativeApplication("dir") expected = { "acinonyx jubatus": { "puma concolor": [20, 15], "vulpes vulpes": [33] }, "canis latrans": { "puma concolor": [12] }, "canis lupus": { "ursus maritimus": [10] }, "felis catus": { "vulpes vulpes": [25] }, "helarctos malayanus": { "lynx rufus": [7, 21], "panthera tigris": [18], "puma concolor": [19], }, "lynx rufus": { "felis catus": [13, 16], "panthera onca": [22], "vulpes zerda": [17], }, "panthera onca": { "panthera leo": [8, 9] }, "panthera tigris": { "panthera leo": [26, 31], "puma concolor": [4, 5, 6], "ursus americanus": [32], }, "puma concolor": { "ursus arctos": [1] }, "ursus americanus": { "lynx rufus": [39], "panthera onca": [40], "panthera tigris": [35, 36, 37], "ursus maritimus": [11], }, "ursus arctos": { "panthera tigris": [2, 3] }, "ursus maritimus": { "panthera tigris": [38], "ursus arctos": [34] }, "vulpes vulpes": { "canis latrans": [29], "panthera onca": [28], "puma concolor": [27], "ursus americanus": [30], "ursus arctos": [14], }, "vulpes zerda": { "vulpes vulpes": [23, 24] }, } assert mca.buildTaxaBasedInteractions(WebObj, "species") == expected expected = { "canidae": { "canidae": [29, 23, 24], "felidae": [12, 28, 27], "ursus": [10, 14, 30], }, "felidae": { "canidae": [33, 25, 17], "felidae": [4, 5, 6, 26, 31, 20, 15, 8, 9, 22, 13, 16], "ursus": [1, 32], }, "ursus": { "felidae": [2, 3, 38, 35, 36, 37, 40, 39, 7, 21, 19, 18], "ursus": [34, 11], }, } assert mca.buildTaxaBasedInteractions(WebObj, "family") == expected