def setUp(self):
self.mols = Read('Data/stringSel.pdb')
new_mols = Read("Data/1crn.pdb")
self.mols +=new_mols
self.atoms = self.mols.chains.residues.atoms
self.stringSel = AtomSetSelector()
def __init__(self,
master,
check=0,
molSet=MoleculeSet([]),
userPref='cS',
vf=None,
all=1,
crColor=(0., 1., 0),
clearButton=True,
showButton=True,
sets=None,
**kw):
if not kw.get('packCfg'):
self.packCfg = {'side': 'top', 'anchor': 'w', 'fill': 'x'}
self.sets = sets
#all is a shortcut to use all of default values
if 'all' in kw.keys():
all = 1
elif __debug__:
if check:
apply(checkKeywords, ('stringSelector', self.entryKeywords),
kw)
Tkinter.Frame.__init__(self, master)
##????
Tkinter.Pack.config(self, side='left', anchor='w')
#to make a stringSelector need vf, moleculeSet, selString
self.master = master
self.molSet = molSet
self.residueSelector = ResidueSetSelector()
self.atomSelector = AtomSetSelector()
self.userPref = userPref
self.vf = vf
if not self.vf is None:
self.addGeom(crColor)
else:
self.showCross = None
self.molCts = {}
self.chainCts = {}
# optsDict includes defaults for all possible widgets
# in practice
# user can specify which widgets to put into gui
d = self.optsDict = {}
#first check for menubuttons:
llists = [self.entryKeywords, self.menuKeywords, self.buttonKeywords]
if all:
if not clearButton:
self.buttonKeywords.remove("clearBut")
if not showButton:
self.buttonKeywords.remove("showBut")
for l in llists:
for key in l:
d[key] = 1
else:
for l in llists:
for key in l:
d[key] = kw.get(key)
self.flexChildren = {
'mol': ['molLabel', 'molEntry'],
'chain': ['chainLabel', 'chainEntry'],
'res': ['resLabel', 'resEntry'],
'atom': ['atomLabel', 'atomEntry'],
}
for w in ['molWids', 'chainWids', 'resWids', 'atomWids']:
if kw.get(w):
lab = w[:-4]
s = lab + 'Label'
d[s] = 1
s1 = lab + 'Entry'
d[s1] = 1
# instantiate all Tkinter variables (?)
#DON"T HAVE ANY???
self.buildTkVars()
# only build requested widgets(?)
self.buildifdDict()
# build commandDictionary
self.buildCmdDict()
self.buildGUI()
def test_constructor(self):
"""
instantiate an AtomSetSelector
"""
stringSel = AtomSetSelector()
self.assertEquals(stringSel.__class__, AtomSetSelector)
