コード例 #1
0
    def create_test_workflow(self, daxfile):
        # The replica catalog can be empty
        rcfile = StringIO("")

        # Just one transformation in the tc
        tcfile = StringIO("""
            tr ls {
              site local {
                pfn "/bin/ls"
                arch "x86_64"
                os "linux"
                type "INSTALLED"
              }
            }
        """)

        # Only the local site in the SC
        scfile = StringIO("""<?xml version="1.0" encoding="UTF-8"?>
            <sitecatalog xmlns="http://pegasus.isi.edu/schema/sitecatalog"
                         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
                         xsi:schemaLocation="http://pegasus.isi.edu/schema/sitecatalog http://pegasus.isi.edu/schema/sc-4.0.xsd"
                         version="4.0">
                <site  handle="local" arch="x86_64" os="LINUX">
                    <directory type="shared-scratch" path="%(tmpdir)s/scratch">
                        <file-server operation="all" url="file://%(tmpdir)s/scratch"/>
                    </directory>
                    <directory type="local-storage" path="%(tmpdir)s/storage">
                        <file-server operation="all" url="file://%(tmpdir)s/storage"/>
                    </directory>
                </site>
            </sitecatalog>
        """ % {"tmpdir": self.tmpdir})

        rc = catalogs.save_catalog("replica", self.username, "replica", "File",
                                   rcfile)
        sc = catalogs.save_catalog("site", self.username, "sites", "XML",
                                   scfile)
        tc = catalogs.save_catalog("transformation", self.username,
                                   "transformations", "text", tcfile)

        conf = StringIO("pegasus.register=false")

        e = ensembles.create_ensemble(self.username, "process", 1, 1)
        ew = ensembles.create_ensemble_workflow(
            e.id,
            "process",
            0,
            rc,
            tc,
            sc,
            daxfile,
            conf,
            sites=["local"],
            output_site="local",
            force=True,
            cleanup=False,
        )

        return e, ew
コード例 #2
0
ファイル: _test_views.py プロジェクト: pegasus-isi/pegasus
    def test_ensemble_db(self):
        self.assertEqual(len(ensembles.list_ensembles(self.username)), 0, "Should be no ensembles")
        e = ensembles.create_ensemble(self.username, "foo", 1, 1)
        self.assertEqual(len(ensembles.list_ensembles(self.username)), 1, "Should be 1 ensemble")


        self.assertEqual(len(ensembles.list_actionable_ensembles()), 0, "Should be 0 actionable ensembles")

        w = ensembles.EnsembleWorkflow(e.id, "bar")
        db.session.add(w)
        db.session.flush()

        self.assertEqual(len(ensembles.list_actionable_ensembles()), 1, "Should be 1 actionable ensembles")
コード例 #3
0
ファイル: _test_views.py プロジェクト: Freeguy1/pegasus-2
    def test_ensemble_db(self):
        self.assertEqual(len(ensembles.list_ensembles(self.username)), 0,
                         "Should be no ensembles")
        e = ensembles.create_ensemble(self.username, "foo", 1, 1)
        self.assertEqual(len(ensembles.list_ensembles(self.username)), 1,
                         "Should be 1 ensemble")

        self.assertEqual(len(ensembles.list_actionable_ensembles()), 0,
                         "Should be 0 actionable ensembles")

        w = ensembles.EnsembleWorkflow(e.id, "bar")
        db.session.add(w)
        db.session.flush()

        self.assertEqual(len(ensembles.list_actionable_ensembles()), 1,
                         "Should be 1 actionable ensembles")
コード例 #4
0
ファイル: _test_manager.py プロジェクト: pegasus-isi/pegasus
    def create_test_workflow(self, daxfile):
        # The replica catalog can be empty
        rcfile = StringIO("")

        # Just one transformation in the tc
        tcfile = StringIO("""
            tr ls {
              site local {
                pfn "/bin/ls"
                arch "x86_64"
                os "linux"
                type "INSTALLED"
              }
            }
        """)

        # Only the local site in the SC
        scfile = StringIO("""<?xml version="1.0" encoding="UTF-8"?>
            <sitecatalog xmlns="http://pegasus.isi.edu/schema/sitecatalog"
                         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
                         xsi:schemaLocation="http://pegasus.isi.edu/schema/sitecatalog http://pegasus.isi.edu/schema/sc-4.0.xsd"
                         version="4.0">
                <site  handle="local" arch="x86_64" os="LINUX">
                    <directory type="shared-scratch" path="%(tmpdir)s/scratch">
                        <file-server operation="all" url="file://%(tmpdir)s/scratch"/>
                    </directory>
                    <directory type="local-storage" path="%(tmpdir)s/storage">
                        <file-server operation="all" url="file://%(tmpdir)s/storage"/>
                    </directory>
                </site>
            </sitecatalog>
        """ % {"tmpdir": self.tmpdir})

        rc = catalogs.save_catalog("replica", self.username, "replica", "File", rcfile)
        sc = catalogs.save_catalog("site", self.username, "sites", "XML", scfile)
        tc = catalogs.save_catalog("transformation", self.username, "transformations", "text", tcfile)

        conf = StringIO("pegasus.register=false")

        e = ensembles.create_ensemble(self.username, "process", 1, 1)
        ew = ensembles.create_ensemble_workflow(e.id, "process", 0, rc, tc, sc, daxfile, conf,
                sites=["local"], output_site="local", force=True, cleanup=False)

        return e, ew