def _getMolecules(self):
"""
:return dict: key is species name, value is species object
"""
molecules = []
for reaction in self.reactions:
molecules.extend(
MoleculeStoichiometry.getMolecules(reaction.reactants))
molecules.extend(
MoleculeStoichiometry.getMolecules(reaction.products))
return util.uniqueify(molecules)
def testGetMolecules(self):
if IGNORE_TEST:
return
names = ["a", "b", "c"]
full_names = list(names)
full_names.extend(names)
m_ss = [MoleculeStoichiometry(Molecule(n), NUM1) for n in full_names]
molecules = MoleculeStoichiometry.getMolecules(m_ss)
self.assertEqual(len(molecules), len(names))