コード例 #1
0
    def getXSDataResultStrategy(self, _xsDataResultBest, _xsDataExperimentalCondition, _xsDataSample):
        xsDataResultStrategy = XSDataResultStrategy()


        #xsDataCollectionRunsBest = _xsDataResultBest.getCollectionRun()
        xsDataCollectionPlansBest = _xsDataResultBest.getCollectionPlan()

        for xsDataCollectionPlanBest in xsDataCollectionPlansBest:

            xsDataCollectionPlan = XSDataCollectionPlan()
            xsDataCollectionStrategy = XSDataCollection()

            xsDataDoubleTransmission = xsDataCollectionPlanBest.getStrategySummary().getAttenuation()

            for xsDataCollectionRunBest in xsDataCollectionPlanBest.getCollectionRun():
                xsDataSubWedge = XSDataSubWedge()
                strXmlStringDataExperimentalCondition = _xsDataExperimentalCondition.marshal()
                xsDataExperimentalCondition = XSDataExperimentalCondition.parseString(strXmlStringDataExperimentalCondition)
                xsDataExperimentalCondition.getBeam().setExposureTime(xsDataCollectionRunBest.getExposureTime())
                xsDataExperimentalCondition.getBeam().setTransmission(xsDataDoubleTransmission)
                xsDataExperimentalCondition.getDetector().setDistance(xsDataCollectionRunBest.getDistance())
                xsDataExperimentalCondition.getGoniostat().setRotationAxisStart(xsDataCollectionRunBest.getPhiStart())
                xsDataExperimentalCondition.getGoniostat().setOscillationWidth(xsDataCollectionRunBest.getPhiWidth())
                fRotationAxisEnd = xsDataCollectionRunBest.getPhiStart().getValue() + xsDataCollectionRunBest.getNumberOfImages().getValue() * xsDataCollectionRunBest.getPhiWidth().getValue()
                xsDataExperimentalCondition.getGoniostat().setRotationAxisEnd(XSDataAngle(fRotationAxisEnd))
                xsDataSubWedge.setExperimentalCondition(xsDataExperimentalCondition)
                xsDataSubWedge.setSubWedgeNumber(xsDataCollectionRunBest.getCollectionRunNumber())
                xsDataCollectionStrategy.addSubWedge(xsDataSubWedge)

            xsDataCollectionStrategy.setSample(_xsDataSample)

            xsDataCollectionPlan.setCollectionStrategy(xsDataCollectionStrategy)
            xsDataStrategySummary = xsDataCollectionPlanBest.getStrategySummary()
            xsDataCollectionPlan.setStrategySummary(xsDataStrategySummary)

            xsDataStatistics = xsDataCollectionPlanBest.getStatisticalPrediction()
            xsDataCollectionPlan.setStatistics(xsDataStatistics)

            xsDataCollectionPlan.setCollectionPlanNumber(xsDataCollectionPlanBest.getCollectionPlanNumber())

            xsDataResultStrategy.addCollectionPlan(xsDataCollectionPlan)

        return xsDataResultStrategy
コード例 #2
0
    def getXSDataStrategyResult(self, _xsDataBestOutput, _xsDataExperimentalCondition, _xsDataSample):
        xsDataStrategyResult = XSDataStrategyResult()


        #xsDataCollectionRunsBest = _xsDataBestOutput.getCollectionRun()
        xsDataCollectionPlansBest = _xsDataBestOutput.getCollectionPlan()

        for xsDataCollectionPlanBest in xsDataCollectionPlansBest:

            xsDataCollectionPlan = XSDataCollectionPlan()
            xsDataCollectionStrategy = XSDataCollection()

            for xsDataCollectionRunBest in xsDataCollectionPlanBest.getCollectionRun():
                xsDataSubWedge = XSDataSubWedge()
                strXmlStringDataExperimentalCondition = _xsDataExperimentalCondition.marshal()
                xsDataExperimentalCondition = XSDataExperimentalCondition.parseString(strXmlStringDataExperimentalCondition)
                xsDataExperimentalCondition.getBeam().setExposureTime(xsDataCollectionRunBest.getExposureTime())
                xsDataExperimentalCondition.getDetector().setDistance(xsDataCollectionRunBest.getDistance())
                xsDataExperimentalCondition.getGoniostat().setRotationAxisStart(xsDataCollectionRunBest.getPhiStart())
                xsDataExperimentalCondition.getGoniostat().setOscillationWidth(xsDataCollectionRunBest.getPhiWidth())
                fRotationAxisEnd = xsDataCollectionRunBest.getPhiStart().getValue() + xsDataCollectionRunBest.getNumberOfImages().getValue() * xsDataCollectionRunBest.getPhiWidth().getValue()
                xsDataExperimentalCondition.getGoniostat().setRotationAxisEnd(XSDataAngle(fRotationAxisEnd))
                xsDataSubWedge.setExperimentalCondition(xsDataExperimentalCondition)
                xsDataCollectionStrategy.addSubWedge(xsDataSubWedge)

            xsDataCollectionStrategy.setSample(_xsDataSample)

            xsDataCollectionPlan.setCollectionStrategy(xsDataCollectionStrategy)
            xsDataStrategySummary = xsDataCollectionPlanBest.getStrategySummary()
            xsDataCollectionPlan.setStrategySummary(xsDataStrategySummary)

            xsDataStatistics = xsDataCollectionPlanBest.getStatisticalPrediction()
            xsDataCollectionPlan.setStatistics(xsDataStatistics)

            xsDataStrategyResult.addCollectionPlan(xsDataCollectionPlan)

        return xsDataStrategyResult
コード例 #3
0
    def getXSDataResultStrategy(self, _xsDataResultBest,
                                _xsDataExperimentalCondition, _xsDataSample):
        xsDataResultStrategy = XSDataResultStrategy()

        listXSDataBestCollectionPlan = _xsDataResultBest.getCollectionPlan()

        for xsDataBestCollectionPlan in listXSDataBestCollectionPlan:

            xsDataCollectionPlan = XSDataCollectionPlan()
            xsDataCollectionStrategy = XSDataCollection()

            xsDataBestStrategySummary = xsDataBestCollectionPlan.getStrategySummary(
            )

            xsDataDoubleTransmission = xsDataBestStrategySummary.getTransmission(
            )

            for xsDataBestCollectionRun in xsDataBestCollectionPlan.getCollectionRun(
            ):
                xsDataSubWedge = XSDataSubWedge()
                strXmlStringDataExperimentalCondition = _xsDataExperimentalCondition.marshal(
                )
                xsDataExperimentalCondition = XSDataExperimentalCondition.parseString(
                    strXmlStringDataExperimentalCondition)
                xsDataExperimentalCondition.getBeam().setExposureTime(
                    xsDataBestCollectionRun.getExposureTime())
                if (xsDataBestCollectionRun.getTransmission() is None):
                    xsDataExperimentalCondition.getBeam().setTransmission(
                        xsDataDoubleTransmission)
                else:
                    xsDataExperimentalCondition.getBeam().setTransmission(
                        xsDataBestCollectionRun.getTransmission())
                xsDataExperimentalCondition.getDetector().setDistance(
                    xsDataBestStrategySummary.getDistance())
                xsDataExperimentalCondition.getGoniostat(
                ).setRotationAxisStart(xsDataBestCollectionRun.getPhiStart())
                xsDataExperimentalCondition.getGoniostat().setOscillationWidth(
                    xsDataBestCollectionRun.getPhiWidth())
                fRotationAxisEnd = xsDataBestCollectionRun.getPhiStart(
                ).getValue(
                ) + xsDataBestCollectionRun.getNumberOfImages().getValue(
                ) * xsDataBestCollectionRun.getPhiWidth().getValue()
                xsDataExperimentalCondition.getGoniostat().setRotationAxisEnd(
                    XSDataAngle(fRotationAxisEnd))
                xsDataSubWedge.setExperimentalCondition(
                    xsDataExperimentalCondition)
                xsDataSubWedge.setSubWedgeNumber(
                    xsDataBestCollectionRun.getCollectionRunNumber())
                if xsDataBestCollectionRun.getCrystalPosition():
                    xsDataSubWedge.setAction(
                        XSDataString("Crystal position: %d" %
                                     xsDataBestCollectionRun.
                                     getCrystalPosition().getValue()))
                else:
                    xsDataSubWedge.setAction(
                        xsDataBestCollectionRun.getAction())
                xsDataCollectionStrategy.addSubWedge(xsDataSubWedge)

            xsDataCollectionStrategy.setSample(_xsDataSample)

            xsDataCollectionPlan.setCollectionStrategy(
                xsDataCollectionStrategy)

            xsDataStrategySummary = XSDataStrategySummary()
            xsDataStrategySummary.setCompleteness(
                xsDataBestStrategySummary.getCompleteness())
            xsDataStrategySummary.setISigma(
                xsDataBestStrategySummary.getISigma())
            xsDataStrategySummary.setRankingResolution(
                xsDataBestStrategySummary.getRankingResolution())
            xsDataStrategySummary.setRedundancy(
                xsDataBestStrategySummary.getRedundancy())
            xsDataStrategySummary.setResolution(
                xsDataBestStrategySummary.getResolution())
            xsDataStrategySummary.setResolutionReasoning(
                xsDataBestStrategySummary.getResolutionReasoning())
            xsDataStrategySummary.setTotalDataCollectionTime(
                xsDataBestStrategySummary.getTotalDataCollectionTime())
            xsDataStrategySummary.setTotalExposureTime(
                xsDataBestStrategySummary.getTotalExposureTime())
            xsDataCollectionPlan.setStrategySummary(xsDataStrategySummary)

            if xsDataBestCollectionPlan.getStatisticalPrediction() is not None:
                xsDataStatisticsStrategy = XSDataStatisticsStrategy.parseString(
                    xsDataBestCollectionPlan.getStatisticalPrediction(
                    ).marshal())
                xsDataCollectionPlan.setStatistics(xsDataStatisticsStrategy)

            xsDataCollectionPlan.setCollectionPlanNumber(
                xsDataBestCollectionPlan.getCollectionPlanNumber())

            xsDataResultStrategy.addCollectionPlan(xsDataCollectionPlan)

        if _xsDataResultBest.getPathToLogFile() != None:
            xsDataResultStrategy.setBestLogFile(
                _xsDataResultBest.getPathToLogFile())

        return xsDataResultStrategy
コード例 #4
0
    def getXSDataResultStrategy(self, _xsDataResultBest, _xsDataExperimentalCondition, _xsDataSample):
        xsDataResultStrategy = XSDataResultStrategy()

        listXSDataBestCollectionPlan = _xsDataResultBest.getCollectionPlan()

        for xsDataBestCollectionPlan in listXSDataBestCollectionPlan:

            xsDataCollectionPlan = XSDataCollectionPlan()
            xsDataCollectionStrategy = XSDataCollection()

            xsDataBestStrategySummary = xsDataBestCollectionPlan.getStrategySummary()

            xsDataDoubleTransmission = xsDataBestStrategySummary.getTransmission()

            for xsDataBestCollectionRun in xsDataBestCollectionPlan.getCollectionRun():
                xsDataSubWedge = XSDataSubWedge()
                strXmlStringDataExperimentalCondition = _xsDataExperimentalCondition.marshal()
                xsDataExperimentalCondition = XSDataExperimentalCondition.parseString(
                    strXmlStringDataExperimentalCondition
                )
                xsDataExperimentalCondition.getBeam().setExposureTime(xsDataBestCollectionRun.getExposureTime())
                if xsDataBestCollectionRun.getTransmission() is None:
                    xsDataExperimentalCondition.getBeam().setTransmission(xsDataDoubleTransmission)
                else:
                    xsDataExperimentalCondition.getBeam().setTransmission(xsDataBestCollectionRun.getTransmission())
                xsDataExperimentalCondition.getDetector().setDistance(xsDataBestStrategySummary.getDistance())
                xsDataExperimentalCondition.getGoniostat().setRotationAxisStart(xsDataBestCollectionRun.getPhiStart())
                xsDataExperimentalCondition.getGoniostat().setOscillationWidth(xsDataBestCollectionRun.getPhiWidth())
                fRotationAxisEnd = (
                    xsDataBestCollectionRun.getPhiStart().getValue()
                    + xsDataBestCollectionRun.getNumberOfImages().getValue()
                    * xsDataBestCollectionRun.getPhiWidth().getValue()
                )
                xsDataExperimentalCondition.getGoniostat().setRotationAxisEnd(XSDataAngle(fRotationAxisEnd))
                xsDataSubWedge.setExperimentalCondition(xsDataExperimentalCondition)
                xsDataSubWedge.setSubWedgeNumber(xsDataBestCollectionRun.getCollectionRunNumber())
                if xsDataBestCollectionRun.getCrystalPosition():
                    xsDataSubWedge.setAction(
                        XSDataString("Crystal position: %d" % xsDataBestCollectionRun.getCrystalPosition().getValue())
                    )
                else:
                    xsDataSubWedge.setAction(xsDataBestCollectionRun.getAction())
                xsDataCollectionStrategy.addSubWedge(xsDataSubWedge)

            xsDataCollectionStrategy.setSample(_xsDataSample)

            xsDataCollectionPlan.setCollectionStrategy(xsDataCollectionStrategy)

            xsDataStrategySummary = XSDataStrategySummary()
            xsDataStrategySummary.setCompleteness(xsDataBestStrategySummary.getCompleteness())
            xsDataStrategySummary.setISigma(xsDataBestStrategySummary.getISigma())
            xsDataStrategySummary.setRankingResolution(xsDataBestStrategySummary.getRankingResolution())
            xsDataStrategySummary.setRedundancy(xsDataBestStrategySummary.getRedundancy())
            xsDataStrategySummary.setResolution(xsDataBestStrategySummary.getResolution())
            xsDataStrategySummary.setResolutionReasoning(xsDataBestStrategySummary.getResolutionReasoning())
            xsDataStrategySummary.setTotalDataCollectionTime(xsDataBestStrategySummary.getTotalDataCollectionTime())
            xsDataStrategySummary.setTotalExposureTime(xsDataBestStrategySummary.getTotalExposureTime())
            xsDataCollectionPlan.setStrategySummary(xsDataStrategySummary)

            if xsDataBestCollectionPlan.getStatisticalPrediction() is not None:
                xsDataStatisticsStrategy = XSDataStatisticsStrategy.parseString(
                    xsDataBestCollectionPlan.getStatisticalPrediction().marshal()
                )
                xsDataCollectionPlan.setStatistics(xsDataStatisticsStrategy)

            xsDataCollectionPlan.setCollectionPlanNumber(xsDataBestCollectionPlan.getCollectionPlanNumber())

            xsDataResultStrategy.addCollectionPlan(xsDataCollectionPlan)

        if _xsDataResultBest.getPathToLogFile() != None:
            xsDataResultStrategy.setBestLogFile(_xsDataResultBest.getPathToLogFile())

        return xsDataResultStrategy