def mergefolds(config_path):
# 03a
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
merge_folds(conf, nfolds=conf.num_folds)
def evaltest(config_path, fold):
# 02
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
eval_test(conf, fold, nfolds=1)
def ensemble_th06(config_path):
# 03a
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
conf.modelname = conf.modelname + '_th06'
conf.skeleton_thresh = 0.6
run_skeletonize(conf)
cleaning_graph(conf)
infer_speed(conf)
make_sub(conf)
make_sub_debug(conf)
def makegraph(config_path):
# 04, 05, 06, 07: skelton, simplify, infer_speed, sub
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
# Output: ske, sknw_gpickle, wkt
# Required time with single process: 30min -> (multiproc: 5min)
run_skeletonize(conf)
# Output: graphs
# Required time with single process: 7min -> (multiproc: 2min)
cleaning_graph(conf)
# Output: graphs_speed
# Required time with single process: 2min
infer_speed(conf)
# Output: solution
# Required time with single process: 0min
make_sub(conf)
make_sub_debug(conf)
def ensemble(config_path):
# 03a
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
ensemble_merge_folds(conf)
# Output: ske, sknw_gpickle, wkt
# Required time with single process: 30min -> (multiproc: 5min)
run_skeletonize(conf)
# Output: graphs
# Required time with single process: 7min -> (multiproc: 2min)
cleaning_graph(conf)
# Output: graphs_speed
# Required time with single process: 2min
infer_speed(conf)
# Output: solution
# Required time with single process: 0min
make_sub(conf)
make_sub_debug(conf)
def main(config_path, fold):
conf = u.load_config(config_path)
u.set_filehandler(conf)
logger.info('ARGV: {}'.format(str(sys.argv)))
train(conf, fold)