コード例 #1
0
def quicksetup(
    ctx, non_interactive, profile, email, first_name, last_name, institution, db_engine, db_backend, db_host, db_port,
    db_name, db_username, db_password, su_db_name, su_db_username, su_db_password, repository
):
    """Setup a new profile in a fully automated fashion."""
    # pylint: disable=too-many-arguments,too-many-locals
    from aiida.manage.external.postgres import Postgres, manual_setup_instructions

    dbinfo_su = {
        'host': db_host,
        'port': db_port,
        'user': su_db_username,
        'password': su_db_password,
    }
    postgres = Postgres(interactive=not non_interactive, quiet=False, dbinfo=dbinfo_su)

    if not postgres.is_connected:
        echo.echo_critical('failed to determine the PostgreSQL setup')

    try:
        create = True
        if not postgres.dbuser_exists(db_username):
            postgres.create_dbuser(db_username, db_password)
        else:
            db_name, create = postgres.check_db_name(db_name)

        if create:
            postgres.create_db(db_username, db_name)
    except Exception as exception:
        echo.echo_error(
            '\n'.join([
                'Oops! quicksetup was unable to create the AiiDA database for you.',
                'For AiiDA to work, please either create the database yourself as follows:',
                manual_setup_instructions(dbuser=su_db_username, dbname=su_db_name), '',
                'Alternatively, give your (operating system) user permission to create postgresql databases' +
                'and run quicksetup again.', ''
            ])
        )
        raise exception

    # The contextual defaults or `verdi setup` are not being called when `invoking`, so we have to explicitly define
    # them here, even though the `verdi setup` command would populate those when called from the command line.
    setup_parameters = {
        'non_interactive': non_interactive,
        'profile': profile,
        'email': email,
        'first_name': first_name,
        'last_name': last_name,
        'institution': institution,
        'db_engine': db_engine,
        'db_backend': db_backend,
        'db_name': db_name,
        # from now on we connect as the AiiDA DB user, which may be forbidden when going via sockets
        'db_host': db_host or 'localhost',
        'db_port': db_port,
        'db_username': db_username,
        'db_password': db_password,
        'repository': repository,
    }
    ctx.invoke(setup, **setup_parameters)
コード例 #2
0
ファイル: cmd_setup.py プロジェクト: timostrunk/aiida-core
def quicksetup(
    ctx, non_interactive, profile, email, first_name, last_name, institution, db_engine, db_backend, db_host, db_port,
    db_name, db_username, db_password, su_db_name, su_db_username, su_db_password, broker_protocol, broker_username,
    broker_password, broker_host, broker_port, broker_virtual_host, repository
):
    """Setup a new profile in a fully automated fashion."""
    # pylint: disable=too-many-arguments,too-many-locals
    from aiida.manage.external.postgres import Postgres, manual_setup_instructions

    dbinfo_su = {
        'host': db_host,
        'port': db_port,
        'user': su_db_username,
        'password': su_db_password,
    }
    postgres = Postgres(interactive=not non_interactive, quiet=False, dbinfo=dbinfo_su)

    if not postgres.is_connected:
        echo.echo_critical('failed to determine the PostgreSQL setup')

    try:
        db_username, db_name = postgres.create_dbuser_db_safe(dbname=db_name, dbuser=db_username, dbpass=db_password)
    except Exception as exception:
        echo.echo_error(
            '\n'.join([
                'Oops! quicksetup was unable to create the AiiDA database for you.',
                'See `verdi quicksetup -h` for how to specify non-standard parameters for the postgresql connection.\n'
                'Alternatively, create the AiiDA database yourself: ',
                manual_setup_instructions(dbuser=su_db_username,
                                          dbname=su_db_name), '', 'and then use `verdi setup` instead', ''
            ])
        )
        raise exception

    # The contextual defaults or `verdi setup` are not being called when `invoking`, so we have to explicitly define
    # them here, even though the `verdi setup` command would populate those when called from the command line.
    setup_parameters = {
        'non_interactive': non_interactive,
        'profile': profile,
        'email': email,
        'first_name': first_name,
        'last_name': last_name,
        'institution': institution,
        'db_engine': db_engine,
        'db_backend': db_backend,
        'db_name': db_name,
        # from now on we connect as the AiiDA DB user, which may be forbidden when going via sockets
        'db_host': postgres.host_for_psycopg2,
        'db_port': postgres.port_for_psycopg2,
        'db_username': db_username,
        'db_password': db_password,
        'broker_protocol': broker_protocol,
        'broker_username': broker_username,
        'broker_password': broker_password,
        'broker_host': broker_host,
        'broker_port': broker_port,
        'broker_virtual_host': broker_virtual_host,
        'repository': repository,
    }
    ctx.invoke(setup, **setup_parameters)
コード例 #3
0
ファイル: test_postgres.py プロジェクト: CasperWA/aiida_core
    def test_determine_setup_fail(self):
        """Check that setup fails, if bad port is provided.

        Note: In interactive mode, this would prompt for the connection details.
        """
        postgres = Postgres(interactive=False, quiet=True, dbinfo={'port': '11111'})
        self.assertFalse(postgres.is_connected)
コード例 #4
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    def test_setup_fail_callback(self):
        """Make sure `determine_setup` works despite wrong initial values in case of correct callback"""

        def correct_setup(interactive, dbinfo):  # pylint: disable=unused-argument
            return self.pg_test.dsn

        postgres = Postgres(interactive=False, quiet=True, dbinfo={'port': '11111'}, determine_setup=False)
        postgres.set_setup_fail_callback(correct_setup)
        setup_success = postgres.determine_setup()
        self.assertTrue(setup_success)
コード例 #5
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 def create_aiida_db(self):
     """
     Create the necessary database on the temporary postgres instance.
     """
     if configuration.PROFILE is not None:
         raise TestManagerError('AiiDA dbenv can not be loaded while creating a tests db environment')
     if self.pg_cluster is None:
         self.create_db_cluster()
     self.postgres = Postgres(interactive=False, quiet=True, dbinfo=self.dbinfo)
     # note: not using postgres.create_dbuser_db_safe here since we don't want prompts
     self.postgres.create_dbuser(self.profile_info['database_username'], self.profile_info['database_password'])
     self.postgres.create_db(self.profile_info['database_username'], self.profile_info['database_name'])
     self.dbinfo = self.postgres.dbinfo
     self.profile_info['database_hostname'] = self.postgres.host_for_psycopg2
     self.profile_info['database_port'] = self.postgres.port_for_psycopg2
     self._has_test_db = True
コード例 #6
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ファイル: test_setup.py プロジェクト: sponce24/aiida-core
    def test_setup(self):
        """Test `verdi setup`."""
        postgres = Postgres(interactive=False,
                            quiet=True,
                            dbinfo=self.pg_test.dsn)
        postgres.determine_setup()
        db_name = 'aiida_test_setup'
        db_user = '******'
        db_pass = '******'
        postgres.create_dbuser(db_user, db_pass)
        postgres.create_db(db_user, db_name)
        configuration.reset_profile()

        profile_name = 'testing'
        user_email = '*****@*****.**'
        user_first_name = 'John'
        user_last_name = 'Smith'
        user_institution = 'ECMA'

        # Keep the `--profile` option last as a regression test for #2897 and #2907. Some of the other options have
        # defaults, callbacks and or contextual defaults that might depend on it, but should not fail if they are parsed
        # before the profile option is parsed.
        options = [
            '--non-interactive', '--email', user_email, '--first-name',
            user_first_name, '--last-name', user_last_name, '--institution',
            user_institution, '--db-name', db_name, '--db-username', db_user,
            '--db-password', db_pass, '--db-port', self.pg_test.dsn['port'],
            '--db-backend', self.backend, '--profile', profile_name
        ]

        result = self.cli_runner.invoke(cmd_setup.setup, options)
        self.assertClickResultNoException(result)
        self.assertClickSuccess(result)

        config = configuration.get_config()
        self.assertIn(profile_name, config.profile_names)

        profile = config.get_profile(profile_name)
        profile.default_user = user_email

        # Verify that the backend type of the created profile matches that of the profile for the current test session
        self.assertEqual(self.backend, profile.database_backend)

        user = orm.User.objects.get(email=user_email)
        self.assertEqual(user.first_name, user_first_name)
        self.assertEqual(user.last_name, user_last_name)
        self.assertEqual(user.institution, user_institution)
コード例 #7
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def create_db(profile):
    """Create PostgreSQL database, if missing."""
    dbinfo_su = {
        'host': profile.database_hostname,
        'port': profile.database_port,
        'user': os.getenv("AIIDADB_SUPER_USER"),
        'password': os.getenv("AIIDADB_SUPER_PASS"),
        'database': 'template1',
    }
    postgres = Postgres(interactive=False, quiet=False,
                        dbinfo=dbinfo_su)  #, determine_setup=False)

    if not postgres.is_connected:
        raise ConnectionError("Unable to connect as super user")

    try:
        if not postgres.dbuser_exists(dbuser=profile.database_username):
            postgres.create_dbuser(dbuser=profile.database_username,
                                   dbpass=profile.database_password)

        if not postgres.db_exists(dbname=profile.database_name):
            postgres.create_db(profile.database_username,
                               profile.database_name)

            # Fill DB with vanilla content
            load_profile(profile.name)
            backend = get_manager()._load_backend(schema_check=False)  # pylint: disable=protected-access

            try:
                backend.migrate()
            except Exception as exception:  # pylint: disable=broad-except
                print(
                    'database migration failed, probably because connection details are incorrect:\n{}'
                    .format(exception))

            # Create the user if it does not yet exist
            created, user = orm.User.objects.get_or_create(
                email=profile.default_user,
                first_name='AiiDA',
                last_name='EXPLORER',
                institution='WEBSERVICE')
            if created:
                user.store()
            profile.default_user = user.email

    except:
        print(traceback.format_exc())
コード例 #8
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    def create_aiida_db(self, pgtest=None):
        """
        Create the necessary database on the temporary postgres instance.

        By utilizing pgtest it is possible to forward initialization arguments to PGTest().

        :param pgtest: a dictionary containing input to PGTest()
        """
        if configuration.PROFILE is not None:
            raise TestManagerError(
                'AiiDA dbenv can not be loaded while creating a tests db environment'
            )
        if self.pg_cluster is None:
            self.create_db_cluster(pgtest)
        self.postgres = Postgres(interactive=False,
                                 quiet=True,
                                 dbinfo=self.dbinfo)
        self.dbinfo = self.postgres.dbinfo.copy()
        self.postgres.create_dbuser(self.profile_info['database_username'],
                                    self.profile_info['database_password'])
        self.postgres.create_db(self.profile_info['database_username'],
                                self.profile_info['database_name'])
        self._has_test_db = True
コード例 #9
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ファイル: test_postgres.py プロジェクト: CasperWA/aiida_core
 def _setup_postgres(self):
     return Postgres(interactive=False, quiet=True, dbinfo=self.pg_test.dsn)
コード例 #10
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 def test_determine_setup_fail(self):
     postgres = Postgres(interactive=False, quiet=True, dbinfo={'port': '11111'})
     self.assertFalse(postgres.is_connected)