コード例 #1
0
    def test_6(self):
        """
        This test checks that nodes belonging to user A (which is not the
        default user) can be correctly exported, imported, enriched with nodes
        from the default user, re-exported & re-imported and that in the end
        all the nodes that have been finally imported belonging to the right
        users.
        """
        import os
        import shutil
        import tempfile

        from aiida.orm import load_node
        from aiida.orm.calculation.job import JobCalculation
        from aiida.orm.data.structure import StructureData
        from aiida.orm.importexport import export
        from aiida.common.datastructures import calc_states
        from aiida.common.links import LinkType
        from aiida.common.utils import get_configured_user_email
        from aiida.orm.user import User

        # Creating a folder for the import/export files
        temp_folder = tempfile.mkdtemp()
        try:
            # Create another user
            new_email = "[email protected]"
            user = User(email=new_email)
            user.force_save()

            # Create a structure data node that has a calculation as output
            sd1 = StructureData()
            sd1.dbnode.user = user._dbuser
            sd1.label = 'sd1'
            sd1.store()

            jc1 = JobCalculation()
            jc1.set_computer(self.computer)
            jc1.set_resources({"num_machines": 1, "num_mpiprocs_per_machine": 1})
            jc1.dbnode.user = user._dbuser
            jc1.label = 'jc1'
            jc1.store()
            jc1.add_link_from(sd1)
            jc1._set_state(calc_states.PARSING)

            # Create some nodes from a different user
            sd2 = StructureData()
            sd2.dbnode.user = user._dbuser
            sd2.label = 'sd2'
            sd2.store()
            sd2.add_link_from(jc1, label='l1', link_type=LinkType.RETURN)

            # Set the jc1 to FINISHED
            jc1._set_state(calc_states.FINISHED)

            # At this point we export the generated data
            filename1 = os.path.join(temp_folder, "export1.tar.gz")
            export([sd2.dbnode], outfile=filename1, silent=True)
            uuids1 = [sd1.uuid, jc1.uuid, sd2.uuid]
            self.clean_db()
            self.insert_data()
            import_data(filename1, silent=True)

            # Check that the imported nodes are correctly imported and that
            # the user assigned to the nodes is the right one
            for uuid in uuids1:
                self.assertEquals(load_node(uuid).get_user().email, new_email)

            # Now we continue to generate more data based on the imported
            # data
            sd2_imp = load_node(sd2.uuid)

            jc2 = JobCalculation()
            jc2.set_computer(self.computer)
            jc2.set_resources({"num_machines": 1, "num_mpiprocs_per_machine": 1})
            jc2.label = 'jc2'
            jc2.store()
            jc2.add_link_from(sd2_imp, label='l2')
            jc2._set_state(calc_states.PARSING)

            sd3 = StructureData()
            sd3.label = 'sd3'
            sd3.store()
            sd3.add_link_from(jc2, label='l3', link_type=LinkType.RETURN)

            # Set the jc2 to FINISHED
            jc2._set_state(calc_states.FINISHED)

            # Store the UUIDs of the nodes that should be checked
            # if they can be imported correctly.
            uuids2 = [jc2.uuid, sd3.uuid]

            filename2 = os.path.join(temp_folder, "export2.tar.gz")
            export([sd3.dbnode], outfile=filename2, silent=True)
            self.clean_db()
            self.insert_data()
            import_data(filename2, silent=True)

            # Check that the imported nodes are correctly imported and that
            # the user assigned to the nodes is the right one
            for uuid in uuids1:
                self.assertEquals(load_node(uuid).get_user().email, new_email)
            for uuid in uuids2:
                self.assertEquals(load_node(uuid).get_user().email,
                                  get_configured_user_email())

        finally:
            # Deleting the created temporary folder
            shutil.rmtree(temp_folder, ignore_errors=True)
コード例 #2
0
    def test_5(self):
        """
        This test checks that nodes belonging to different users are correctly
        exported & imported.
        """
        import os
        import shutil
        import tempfile

        from aiida.orm import load_node
        from aiida.orm.calculation.job import JobCalculation
        from aiida.orm.data.structure import StructureData
        from aiida.orm.importexport import export
        from aiida.common.datastructures import calc_states
        from aiida.common.links import LinkType
        from aiida.orm.user import User
        from aiida.common.utils import get_configured_user_email

        # Creating a folder for the import/export files
        temp_folder = tempfile.mkdtemp()
        try:
            # Create another user
            new_email = "[email protected]"
            user = User(email=new_email)
            user.force_save()

            # Create a structure data node that has a calculation as output
            sd1 = StructureData()
            sd1.dbnode.user = user._dbuser
            sd1.label = 'sd1'
            sd1.store()

            jc1 = JobCalculation()
            jc1.set_computer(self.computer)
            jc1.set_resources({"num_machines": 1, "num_mpiprocs_per_machine": 1})
            jc1.dbnode.user = user._dbuser
            jc1.label = 'jc1'
            jc1.store()
            jc1.add_link_from(sd1)
            jc1._set_state(calc_states.PARSING)

            # Create some nodes from a different user
            sd2 = StructureData()
            sd2.dbnode.user = user._dbuser
            sd2.label = 'sd2'
            sd2.store()
            sd2.add_link_from(jc1, label='l1', link_type=LinkType.RETURN)

            jc2 = JobCalculation()
            jc2.set_computer(self.computer)
            jc2.set_resources({"num_machines": 1, "num_mpiprocs_per_machine": 1})
            jc2.label = 'jc2'
            jc2.store()
            jc2.add_link_from(sd2, label='l2')
            jc2._set_state(calc_states.PARSING)

            sd3 = StructureData()
            sd3.label = 'sd3'
            sd3.store()
            sd3.add_link_from(jc2, label='l3', link_type=LinkType.RETURN)

            uuids_u1 = [sd1.uuid, jc1.uuid, sd2.uuid]
            uuids_u2 = [jc2.uuid, sd3.uuid]

            filename = os.path.join(temp_folder, "export.tar.gz")

            export([sd3.dbnode], outfile=filename, silent=True)
            self.clean_db()
            import_data(filename, silent=True)

            # Check that the imported nodes are correctly imported and that
            # the user assigned to the nodes is the right one
            for uuid in uuids_u1:
                self.assertEquals(load_node(uuid).get_user().email, new_email)
            for uuid in uuids_u2:
                self.assertEquals(load_node(uuid).get_user().email,
                                  get_configured_user_email())
        finally:
            # Deleting the created temporary folder
            shutil.rmtree(temp_folder, ignore_errors=True)