コード例 #1
0
def process_inputs(input_data):

    start = time.time()
    eval_examples = squad_utils.read_squad_examples(input_data,
                                                    is_training=False)
    eval_features = []

    eval_writer = squad_utils.FeatureWriter(filename=predict_file,
                                            is_training=False)

    def append_feature(feature):
        eval_features.append(feature)
        eval_writer.process_feature(feature)

    tokenizer = fine_tuning_utils.create_vocab(
        vocab_file=None,
        do_lower_case=True,
        spm_model_file='/Users/benediktgroever/albert/albert/30k-clean.model',
        hub_module=None)

    squad_utils.convert_examples_to_features(examples=eval_examples,
                                             tokenizer=tokenizer,
                                             max_seq_length=384,
                                             doc_stride=128,
                                             max_query_length=64,
                                             is_training=False,
                                             output_fn=append_feature,
                                             do_lower_case=True)

    eval_writer.close()

    return eval_examples, eval_features
コード例 #2
0
def main(_):
  tf.logging.set_verbosity(tf.logging.INFO)

  albert_config = modeling.AlbertConfig.from_json_file(FLAGS.albert_config_file)

  validate_flags_or_throw(albert_config)

  tf.gfile.MakeDirs(FLAGS.output_dir)

  tokenizer = fine_tuning_utils.create_vocab(
      vocab_file=FLAGS.vocab_file,
      do_lower_case=FLAGS.do_lower_case,
      spm_model_file=FLAGS.spm_model_file,
      hub_module=FLAGS.albert_hub_module_handle)

  tpu_cluster_resolver = None
  if FLAGS.use_tpu and FLAGS.tpu_name:
    tpu_cluster_resolver = contrib_cluster_resolver.TPUClusterResolver(
        FLAGS.tpu_name, zone=FLAGS.tpu_zone, project=FLAGS.gcp_project)

  is_per_host = contrib_tpu.InputPipelineConfig.PER_HOST_V2
  if FLAGS.do_train:
    iterations_per_loop = int(min(FLAGS.iterations_per_loop,
                                  FLAGS.save_checkpoints_steps))
  else:
    iterations_per_loop = FLAGS.iterations_per_loop
  run_config = contrib_tpu.RunConfig(
      cluster=tpu_cluster_resolver,
      master=FLAGS.master,
      model_dir=FLAGS.output_dir,
      keep_checkpoint_max=0,
      save_checkpoints_steps=FLAGS.save_checkpoints_steps,
      tpu_config=contrib_tpu.TPUConfig(
          iterations_per_loop=iterations_per_loop,
          num_shards=FLAGS.num_tpu_cores,
          per_host_input_for_training=is_per_host))

  train_examples = None
  num_train_steps = None
  num_warmup_steps = None
  train_examples = squad_utils.read_squad_examples(
      input_file=FLAGS.train_file, is_training=True)
  num_train_steps = int(
      len(train_examples) / FLAGS.train_batch_size * FLAGS.num_train_epochs)
  if FLAGS.do_train:
    num_warmup_steps = int(num_train_steps * FLAGS.warmup_proportion)

    # Pre-shuffle the input to avoid having to make a very large shuffle
    # buffer in in the `input_fn`.
    rng = random.Random(12345)
    rng.shuffle(train_examples)

  model_fn = squad_utils.v2_model_fn_builder(
      albert_config=albert_config,
      init_checkpoint=FLAGS.init_checkpoint,
      learning_rate=FLAGS.learning_rate,
      num_train_steps=num_train_steps,
      num_warmup_steps=num_warmup_steps,
      use_tpu=FLAGS.use_tpu,
      use_one_hot_embeddings=FLAGS.use_tpu,
      max_seq_length=FLAGS.max_seq_length,
      start_n_top=FLAGS.start_n_top,
      end_n_top=FLAGS.end_n_top,
      dropout_prob=FLAGS.dropout_prob,
      hub_module=FLAGS.albert_hub_module_handle)

  # If TPU is not available, this will fall back to normal Estimator on CPU
  # or GPU.
  estimator = contrib_tpu.TPUEstimator(
      use_tpu=FLAGS.use_tpu,
      model_fn=model_fn,
      config=run_config,
      train_batch_size=FLAGS.train_batch_size,
      predict_batch_size=FLAGS.predict_batch_size)

  if FLAGS.do_train:
    # We write to a temporary file to avoid storing very large constant tensors
    # in memory.

    if not tf.gfile.Exists(FLAGS.train_feature_file):
      train_writer = squad_utils.FeatureWriter(
          filename=os.path.join(FLAGS.train_feature_file), is_training=True)
      squad_utils.convert_examples_to_features(
          examples=train_examples,
          tokenizer=tokenizer,
          max_seq_length=FLAGS.max_seq_length,
          doc_stride=FLAGS.doc_stride,
          max_query_length=FLAGS.max_query_length,
          is_training=True,
          output_fn=train_writer.process_feature,
          do_lower_case=FLAGS.do_lower_case)
      train_writer.close()

    tf.logging.info("***** Running training *****")
    tf.logging.info("  Num orig examples = %d", len(train_examples))
    # tf.logging.info("  Num split examples = %d", train_writer.num_features)
    tf.logging.info("  Batch size = %d", FLAGS.train_batch_size)
    tf.logging.info("  Num steps = %d", num_train_steps)
    del train_examples

    train_input_fn = squad_utils.input_fn_builder(
        input_file=FLAGS.train_feature_file,
        seq_length=FLAGS.max_seq_length,
        is_training=True,
        drop_remainder=True,
        use_tpu=FLAGS.use_tpu,
        bsz=FLAGS.train_batch_size,
        is_v2=True)
    estimator.train(input_fn=train_input_fn, max_steps=num_train_steps)

  if FLAGS.do_predict:
    with tf.gfile.Open(FLAGS.predict_file) as predict_file:
      prediction_json = json.load(predict_file)["data"]
    eval_examples = squad_utils.read_squad_examples(
        input_file=FLAGS.predict_file, is_training=False)

    if (tf.gfile.Exists(FLAGS.predict_feature_file) and tf.gfile.Exists(
        FLAGS.predict_feature_left_file)):
      tf.logging.info("Loading eval features from {}".format(
          FLAGS.predict_feature_left_file))
      with tf.gfile.Open(FLAGS.predict_feature_left_file, "rb") as fin:
        eval_features = pickle.load(fin)
    else:
      eval_writer = squad_utils.FeatureWriter(
          filename=FLAGS.predict_feature_file, is_training=False)
      eval_features = []

      def append_feature(feature):
        eval_features.append(feature)
        eval_writer.process_feature(feature)

      squad_utils.convert_examples_to_features(
          examples=eval_examples,
          tokenizer=tokenizer,
          max_seq_length=FLAGS.max_seq_length,
          doc_stride=FLAGS.doc_stride,
          max_query_length=FLAGS.max_query_length,
          is_training=False,
          output_fn=append_feature,
          do_lower_case=FLAGS.do_lower_case)
      eval_writer.close()

      with tf.gfile.Open(FLAGS.predict_feature_left_file, "wb") as fout:
        pickle.dump(eval_features, fout)

    tf.logging.info("***** Running predictions *****")
    tf.logging.info("  Num orig examples = %d", len(eval_examples))
    tf.logging.info("  Num split examples = %d", len(eval_features))
    tf.logging.info("  Batch size = %d", FLAGS.predict_batch_size)

    predict_input_fn = squad_utils.input_fn_builder(
        input_file=FLAGS.predict_feature_file,
        seq_length=FLAGS.max_seq_length,
        is_training=False,
        drop_remainder=False,
        use_tpu=FLAGS.use_tpu,
        bsz=FLAGS.predict_batch_size,
        is_v2=True)

    def get_result(checkpoint):
      """Evaluate the checkpoint on SQuAD v2.0."""
      # If running eval on the TPU, you will need to specify the number of
      # steps.
      reader = tf.train.NewCheckpointReader(checkpoint)
      global_step = reader.get_tensor(tf.GraphKeys.GLOBAL_STEP)
      all_results = []
      for result in estimator.predict(
          predict_input_fn, yield_single_examples=True,
          checkpoint_path=checkpoint):
        if len(all_results) % 1000 == 0:
          tf.logging.info("Processing example: %d" % (len(all_results)))
        unique_id = int(result["unique_ids"])
        start_top_log_probs = (
            [float(x) for x in result["start_top_log_probs"].flat])
        start_top_index = [int(x) for x in result["start_top_index"].flat]
        end_top_log_probs = (
            [float(x) for x in result["end_top_log_probs"].flat])
        end_top_index = [int(x) for x in result["end_top_index"].flat]

        cls_logits = float(result["cls_logits"].flat[0])
        all_results.append(
            squad_utils.RawResultV2(
                unique_id=unique_id,
                start_top_log_probs=start_top_log_probs,
                start_top_index=start_top_index,
                end_top_log_probs=end_top_log_probs,
                end_top_index=end_top_index,
                cls_logits=cls_logits))

      output_prediction_file = os.path.join(
          FLAGS.output_dir, "predictions.json")
      output_nbest_file = os.path.join(
          FLAGS.output_dir, "nbest_predictions.json")
      output_null_log_odds_file = os.path.join(
          FLAGS.output_dir, "null_odds.json")

      result_dict = {}
      cls_dict = {}
      squad_utils.accumulate_predictions_v2(
          result_dict, cls_dict, eval_examples, eval_features,
          all_results, FLAGS.n_best_size, FLAGS.max_answer_length,
          FLAGS.start_n_top, FLAGS.end_n_top)

      return squad_utils.evaluate_v2(
          result_dict, cls_dict, prediction_json, eval_examples,
          eval_features, all_results, FLAGS.n_best_size,
          FLAGS.max_answer_length, output_prediction_file, output_nbest_file,
          output_null_log_odds_file), int(global_step)

    def _find_valid_cands(curr_step):
      filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
      candidates = []
      for filename in filenames:
        if filename.endswith(".index"):
          ckpt_name = filename[:-6]
          idx = ckpt_name.split("-")[-1]
          if idx != "best" and int(idx) > curr_step:
            candidates.append(filename)
      return candidates

    output_eval_file = os.path.join(FLAGS.output_dir, "eval_results.txt")
    checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
    key_name = "f1"
    writer = tf.gfile.GFile(output_eval_file, "w")
    if tf.gfile.Exists(checkpoint_path + ".index"):
      result = get_result(checkpoint_path)
      best_perf = result[0][key_name]
      global_step = result[1]
    else:
      global_step = -1
      best_perf = -1
      checkpoint_path = None
    while global_step < num_train_steps:
      steps_and_files = {}
      filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
      for filename in filenames:
        if filename.endswith(".index"):
          ckpt_name = filename[:-6]
          cur_filename = os.path.join(FLAGS.output_dir, ckpt_name)
          if cur_filename.split("-")[-1] == "best":
            continue
          gstep = int(cur_filename.split("-")[-1])
          if gstep not in steps_and_files:
            tf.logging.info("Add {} to eval list.".format(cur_filename))
            steps_and_files[gstep] = cur_filename
      tf.logging.info("found {} files.".format(len(steps_and_files)))
      if not steps_and_files:
        tf.logging.info("found 0 file, global step: {}. Sleeping."
                        .format(global_step))
        time.sleep(60)
      else:
        for ele in sorted(steps_and_files.items()):
          step, checkpoint_path = ele
          if global_step >= step:
            if len(_find_valid_cands(step)) > 1:
              for ext in ["meta", "data-00000-of-00001", "index"]:
                src_ckpt = checkpoint_path + ".{}".format(ext)
                tf.logging.info("removing {}".format(src_ckpt))
                tf.gfile.Remove(src_ckpt)
            continue
          result, global_step = get_result(checkpoint_path)
          tf.logging.info("***** Eval results *****")
          for key in sorted(result.keys()):
            tf.logging.info("  %s = %s", key, str(result[key]))
            writer.write("%s = %s\n" % (key, str(result[key])))
          if result[key_name] > best_perf:
            best_perf = result[key_name]
            for ext in ["meta", "data-00000-of-00001", "index"]:
              src_ckpt = checkpoint_path + ".{}".format(ext)
              tgt_ckpt = checkpoint_path.rsplit(
                  "-", 1)[0] + "-best.{}".format(ext)
              tf.logging.info("saving {} to {}".format(src_ckpt, tgt_ckpt))
              tf.gfile.Copy(src_ckpt, tgt_ckpt, overwrite=True)
              writer.write("saved {} to {}\n".format(src_ckpt, tgt_ckpt))
          writer.write("best {} = {}\n".format(key_name, best_perf))
          tf.logging.info("  best {} = {}\n".format(key_name, best_perf))

          if len(_find_valid_cands(global_step)) > 2:
            for ext in ["meta", "data-00000-of-00001", "index"]:
              src_ckpt = checkpoint_path + ".{}".format(ext)
              tf.logging.info("removing {}".format(src_ckpt))
              tf.gfile.Remove(src_ckpt)
          writer.write("=" * 50 + "\n")

    checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
    result, global_step = get_result(checkpoint_path)
    tf.logging.info("***** Final Eval results *****")
    for key in sorted(result.keys()):
      tf.logging.info("  %s = %s", key, str(result[key]))
      writer.write("%s = %s\n" % (key, str(result[key])))
    writer.write("best perf happened at step: {}".format(global_step))
def main(_):
  tf.logging.set_verbosity(tf.logging.INFO)

  processors = {
      "cola": classifier_utils.ColaProcessor,
      "mnli": classifier_utils.MnliProcessor,
      "mismnli": classifier_utils.MisMnliProcessor,
      "mrpc": classifier_utils.MrpcProcessor,
      "rte": classifier_utils.RteProcessor,
      "sst-2": classifier_utils.Sst2Processor,
      "sts-b": classifier_utils.StsbProcessor,
      "qqp": classifier_utils.QqpProcessor,
      "qnli": classifier_utils.QnliProcessor,
      "wnli": classifier_utils.WnliProcessor,
  }

  if not (FLAGS.do_train or FLAGS.do_eval or FLAGS.do_predict or
          FLAGS.export_dir):
    raise ValueError(
        "At least one of `do_train`, `do_eval`, `do_predict' or `export_dir` "
        "must be True.")

  if not FLAGS.albert_config_file and not FLAGS.albert_hub_module_handle:
    raise ValueError("At least one of `--albert_config_file` and "
                     "`--albert_hub_module_handle` must be set")

  if FLAGS.albert_config_file:
    albert_config = modeling.AlbertConfig.from_json_file(
        FLAGS.albert_config_file)
    if FLAGS.max_seq_length > albert_config.max_position_embeddings:
      raise ValueError(
          "Cannot use sequence length %d because the ALBERT model "
          "was only trained up to sequence length %d" %
          (FLAGS.max_seq_length, albert_config.max_position_embeddings))
  else:
    albert_config = None  # Get the config from TF-Hub.

  tf.gfile.MakeDirs(FLAGS.output_dir)

  task_name = FLAGS.task_name.lower()

  if task_name not in processors:
    raise ValueError("Task not found: %s" % (task_name))

  processor = processors[task_name](
      use_spm=True if FLAGS.spm_model_file else False,
      do_lower_case=FLAGS.do_lower_case)

  label_list = processor.get_labels()

  tokenizer = fine_tuning_utils.create_vocab(
      vocab_file=FLAGS.vocab_file,
      do_lower_case=FLAGS.do_lower_case,
      spm_model_file=FLAGS.spm_model_file,
      hub_module=FLAGS.albert_hub_module_handle)

  tpu_cluster_resolver = None
  if FLAGS.use_tpu and FLAGS.tpu_name:
    tpu_cluster_resolver = contrib_cluster_resolver.TPUClusterResolver(
        FLAGS.tpu_name, zone=FLAGS.tpu_zone, project=FLAGS.gcp_project)

  is_per_host = contrib_tpu.InputPipelineConfig.PER_HOST_V2
  if FLAGS.do_train:
    iterations_per_loop = int(min(FLAGS.iterations_per_loop,
                                  FLAGS.save_checkpoints_steps))
  else:
    iterations_per_loop = FLAGS.iterations_per_loop
  run_config = contrib_tpu.RunConfig(
      cluster=tpu_cluster_resolver,
      master=FLAGS.master,
      model_dir=FLAGS.output_dir,
      save_checkpoints_steps=int(FLAGS.save_checkpoints_steps),
      keep_checkpoint_max=0,
      tpu_config=contrib_tpu.TPUConfig(
          iterations_per_loop=iterations_per_loop,
          num_shards=FLAGS.num_tpu_cores,
          per_host_input_for_training=is_per_host))

  train_examples = None
  if FLAGS.do_train:
    train_examples = processor.get_train_examples(FLAGS.data_dir)
  model_fn = classifier_utils.model_fn_builder(
      albert_config=albert_config,
      num_labels=len(label_list),
      init_checkpoint=FLAGS.init_checkpoint,
      learning_rate=FLAGS.learning_rate,
      num_train_steps=FLAGS.train_step,
      num_warmup_steps=FLAGS.warmup_step,
      use_tpu=FLAGS.use_tpu,
      use_one_hot_embeddings=FLAGS.use_tpu,
      task_name=task_name,
      hub_module=FLAGS.albert_hub_module_handle,
      optimizer=FLAGS.optimizer)

  if not math.isnan(FLAGS.threshold_to_export):
    model_fn = _add_threshold_to_model_fn(model_fn, FLAGS.threshold_to_export)

  # If TPU is not available, this will fall back to normal Estimator on CPU
  # or GPU.
  estimator = contrib_tpu.TPUEstimator(
      use_tpu=FLAGS.use_tpu,
      model_fn=model_fn,
      config=run_config,
      train_batch_size=FLAGS.train_batch_size,
      eval_batch_size=FLAGS.eval_batch_size,
      predict_batch_size=FLAGS.predict_batch_size,
      export_to_tpu=False)  # http://yaqs/4707241341091840

  if FLAGS.do_train:
    cached_dir = FLAGS.cached_dir
    if not cached_dir:
      cached_dir = FLAGS.output_dir
    train_file = os.path.join(cached_dir, task_name + "_train.tf_record")
    if not tf.gfile.Exists(train_file):
      classifier_utils.file_based_convert_examples_to_features(
          train_examples, label_list, FLAGS.max_seq_length, tokenizer,
          train_file, task_name)
    tf.logging.info("***** Running training *****")
    tf.logging.info("  Num examples = %d", len(train_examples))
    tf.logging.info("  Batch size = %d", FLAGS.train_batch_size)
    tf.logging.info("  Num steps = %d", FLAGS.train_step)
    train_input_fn = classifier_utils.file_based_input_fn_builder(
        input_file=train_file,
        seq_length=FLAGS.max_seq_length,
        is_training=True,
        drop_remainder=True,
        task_name=task_name,
        use_tpu=FLAGS.use_tpu,
        bsz=FLAGS.train_batch_size)
    estimator.train(input_fn=train_input_fn, max_steps=FLAGS.train_step)

  if FLAGS.do_eval:
    eval_examples = processor.get_dev_examples(FLAGS.data_dir)
    num_actual_eval_examples = len(eval_examples)
    if FLAGS.use_tpu:
      # TPU requires a fixed batch size for all batches, therefore the number
      # of examples must be a multiple of the batch size, or else examples
      # will get dropped. So we pad with fake examples which are ignored
      # later on. These do NOT count towards the metric (all tf.metrics
      # support a per-instance weight, and these get a weight of 0.0).
      while len(eval_examples) % FLAGS.eval_batch_size != 0:
        eval_examples.append(classifier_utils.PaddingInputExample())

    cached_dir = FLAGS.cached_dir
    if not cached_dir:
      cached_dir = FLAGS.output_dir
    eval_file = os.path.join(cached_dir, task_name + "_eval.tf_record")
    if not tf.gfile.Exists(eval_file):
      classifier_utils.file_based_convert_examples_to_features(
          eval_examples, label_list, FLAGS.max_seq_length, tokenizer,
          eval_file, task_name)

    tf.logging.info("***** Running evaluation *****")
    tf.logging.info("  Num examples = %d (%d actual, %d padding)",
                    len(eval_examples), num_actual_eval_examples,
                    len(eval_examples) - num_actual_eval_examples)
    tf.logging.info("  Batch size = %d", FLAGS.eval_batch_size)

    # This tells the estimator to run through the entire set.
    eval_steps = None
    # However, if running eval on the TPU, you will need to specify the
    # number of steps.
    if FLAGS.use_tpu:
      assert len(eval_examples) % FLAGS.eval_batch_size == 0
      eval_steps = int(len(eval_examples) // FLAGS.eval_batch_size)

    eval_drop_remainder = True if FLAGS.use_tpu else False
    eval_input_fn = classifier_utils.file_based_input_fn_builder(
        input_file=eval_file,
        seq_length=FLAGS.max_seq_length,
        is_training=False,
        drop_remainder=eval_drop_remainder,
        task_name=task_name,
        use_tpu=FLAGS.use_tpu,
        bsz=FLAGS.eval_batch_size)

    best_trial_info_file = os.path.join(FLAGS.output_dir, "best_trial.txt")

    def _best_trial_info():
      """Returns information about which checkpoints have been evaled so far."""
      if tf.gfile.Exists(best_trial_info_file):
        with tf.gfile.GFile(best_trial_info_file, "r") as best_info:
          global_step, best_metric_global_step, metric_value = (
              best_info.read().split(":"))
          global_step = int(global_step)
          best_metric_global_step = int(best_metric_global_step)
          metric_value = float(metric_value)
      else:
        metric_value = -1
        best_metric_global_step = -1
        global_step = -1
      tf.logging.info(
          "Best trial info: Step: %s, Best Value Step: %s, "
          "Best Value: %s", global_step, best_metric_global_step, metric_value)
      return global_step, best_metric_global_step, metric_value

    def _remove_checkpoint(checkpoint_path):
      for ext in ["meta", "data-00000-of-00001", "index"]:
        src_ckpt = checkpoint_path + ".{}".format(ext)
        tf.logging.info("removing {}".format(src_ckpt))
        tf.gfile.Remove(src_ckpt)

    def _find_valid_cands(curr_step):
      filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
      candidates = []
      for filename in filenames:
        if filename.endswith(".index"):
          ckpt_name = filename[:-6]
          idx = ckpt_name.split("-")[-1]
          if int(idx) > curr_step:
            candidates.append(filename)
      return candidates

    output_eval_file = os.path.join(FLAGS.output_dir, "eval_results.txt")

    if task_name == "sts-b":
      key_name = "pearson"
    elif task_name == "cola":
      key_name = "matthew_corr"
    else:
      key_name = "eval_accuracy"

    global_step, best_perf_global_step, best_perf = _best_trial_info()
    writer = tf.gfile.GFile(output_eval_file, "w")
    while global_step < FLAGS.train_step:
      steps_and_files = {}
      filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
      for filename in filenames:
        if filename.endswith(".index"):
          ckpt_name = filename[:-6]
          cur_filename = os.path.join(FLAGS.output_dir, ckpt_name)
          if cur_filename.split("-")[-1] == "best":
            continue
          gstep = int(cur_filename.split("-")[-1])
          if gstep not in steps_and_files:
            tf.logging.info("Add {} to eval list.".format(cur_filename))
            steps_and_files[gstep] = cur_filename
      tf.logging.info("found {} files.".format(len(steps_and_files)))
      if not steps_and_files:
        tf.logging.info("found 0 file, global step: {}. Sleeping."
                        .format(global_step))
        time.sleep(60)
      else:
        for checkpoint in sorted(steps_and_files.items()):
          step, checkpoint_path = checkpoint
          if global_step >= step:
            if (best_perf_global_step != step and
                len(_find_valid_cands(step)) > 1):
              _remove_checkpoint(checkpoint_path)
            continue
          result = estimator.evaluate(
              input_fn=eval_input_fn,
              steps=eval_steps,
              checkpoint_path=checkpoint_path)
          global_step = result["global_step"]
          tf.logging.info("***** Eval results *****")
          for key in sorted(result.keys()):
            tf.logging.info("  %s = %s", key, str(result[key]))
            writer.write("%s = %s\n" % (key, str(result[key])))
          writer.write("best = {}\n".format(best_perf))
          if result[key_name] > best_perf:
            best_perf = result[key_name]
            best_perf_global_step = global_step
          elif len(_find_valid_cands(global_step)) > 1:
            _remove_checkpoint(checkpoint_path)
          writer.write("=" * 50 + "\n")
          writer.flush()
          with tf.gfile.GFile(best_trial_info_file, "w") as best_info:
            best_info.write("{}:{}:{}".format(
                global_step, best_perf_global_step, best_perf))
    writer.close()

    for ext in ["meta", "data-00000-of-00001", "index"]:
      src_ckpt = "model.ckpt-{}.{}".format(best_perf_global_step, ext)
      tgt_ckpt = "model.ckpt-best.{}".format(ext)
      tf.logging.info("saving {} to {}".format(src_ckpt, tgt_ckpt))
      tf.io.gfile.rename(
          os.path.join(FLAGS.output_dir, src_ckpt),
          os.path.join(FLAGS.output_dir, tgt_ckpt),
          overwrite=True)

  if FLAGS.do_predict:
    predict_examples = processor.get_test_examples(FLAGS.data_dir)
    num_actual_predict_examples = len(predict_examples)
    if FLAGS.use_tpu:
      # TPU requires a fixed batch size for all batches, therefore the number
      # of examples must be a multiple of the batch size, or else examples
      # will get dropped. So we pad with fake examples which are ignored
      # later on.
      while len(predict_examples) % FLAGS.predict_batch_size != 0:
        predict_examples.append(classifier_utils.PaddingInputExample())

    predict_file = os.path.join(FLAGS.output_dir, "predict.tf_record")
    classifier_utils.file_based_convert_examples_to_features(
        predict_examples, label_list,
        FLAGS.max_seq_length, tokenizer,
        predict_file, task_name)

    tf.logging.info("***** Running prediction*****")
    tf.logging.info("  Num examples = %d (%d actual, %d padding)",
                    len(predict_examples), num_actual_predict_examples,
                    len(predict_examples) - num_actual_predict_examples)
    tf.logging.info("  Batch size = %d", FLAGS.predict_batch_size)

    predict_drop_remainder = True if FLAGS.use_tpu else False
    predict_input_fn = classifier_utils.file_based_input_fn_builder(
        input_file=predict_file,
        seq_length=FLAGS.max_seq_length,
        is_training=False,
        drop_remainder=predict_drop_remainder,
        task_name=task_name,
        use_tpu=FLAGS.use_tpu,
        bsz=FLAGS.predict_batch_size)

    checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
    result = estimator.predict(
        input_fn=predict_input_fn,
        checkpoint_path=checkpoint_path)

    output_predict_file = os.path.join(FLAGS.output_dir, "test_results.tsv")
    output_submit_file = os.path.join(FLAGS.output_dir, "submit_results.tsv")
    with tf.gfile.GFile(output_predict_file, "w") as pred_writer,\
        tf.gfile.GFile(output_submit_file, "w") as sub_writer:
      sub_writer.write("index" + "\t" + "prediction\n")
      num_written_lines = 0
      tf.logging.info("***** Predict results *****")
      for (i, (example, prediction)) in\
          enumerate(zip(predict_examples, result)):
        probabilities = prediction["probabilities"]
        if i >= num_actual_predict_examples:
          break
        output_line = "\t".join(
            str(class_probability)
            for class_probability in probabilities) + "\n"
        pred_writer.write(output_line)

        if task_name != "sts-b":
          actual_label = label_list[int(prediction["predictions"])]
        else:
          actual_label = str(prediction["predictions"])
        sub_writer.write(example.guid + "\t" + actual_label + "\n")
        num_written_lines += 1
    assert num_written_lines == num_actual_predict_examples

  if FLAGS.export_dir:
    tf.gfile.MakeDirs(FLAGS.export_dir)
    checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
    tf.logging.info("Starting to export model.")
    subfolder = estimator.export_saved_model(
        export_dir_base=FLAGS.export_dir,
        serving_input_receiver_fn=_serving_input_receiver_fn,
        checkpoint_path=checkpoint_path)
    tf.logging.info("Model exported to %s.", subfolder)
コード例 #4
0
ファイル: run_race.py プロジェクト: Siddhan31/Bioalbert
def main(_):
    tf.logging.set_verbosity(tf.logging.INFO)

    processors = {"race": race_utils.RaceProcessor}

    if not FLAGS.do_train and not FLAGS.do_eval and not FLAGS.do_predict:
        raise ValueError(
            "At least one of `do_train`, `do_eval` or `do_predict' must be True."
        )

    albert_config = modeling.AlbertConfig.from_json_file(
        FLAGS.albert_config_file)

    if FLAGS.max_seq_length > albert_config.max_position_embeddings:
        raise ValueError(
            "Cannot use sequence length %d because the ALBERT model "
            "was only trained up to sequence length %d" %
            (FLAGS.max_seq_length, albert_config.max_position_embeddings))

    tf.gfile.MakeDirs(FLAGS.output_dir)

    task_name = FLAGS.task_name.lower()

    if task_name not in processors:
        raise ValueError("Task not found: %s" % (task_name))

    processor = processors[task_name](
        use_spm=True if FLAGS.spm_model_file else False,
        do_lower_case=FLAGS.do_lower_case,
        high_only=FLAGS.high_only,
        middle_only=FLAGS.middle_only)

    label_list = processor.get_labels()

    tokenizer = fine_tuning_utils.create_vocab(
        vocab_file=FLAGS.vocab_file,
        do_lower_case=FLAGS.do_lower_case,
        spm_model_file=FLAGS.spm_model_file,
        hub_module=FLAGS.albert_hub_module_handle)

    tpu_cluster_resolver = None
    if FLAGS.use_tpu and FLAGS.tpu_name:
        tpu_cluster_resolver = contrib_cluster_resolver.TPUClusterResolver(
            FLAGS.tpu_name, zone=FLAGS.tpu_zone, project=FLAGS.gcp_project)

    is_per_host = contrib_tpu.InputPipelineConfig.PER_HOST_V2
    if FLAGS.do_train:
        iterations_per_loop = int(
            min(FLAGS.iterations_per_loop, FLAGS.save_checkpoints_steps))
    else:
        iterations_per_loop = FLAGS.iterations_per_loop
    run_config = contrib_tpu.RunConfig(
        cluster=tpu_cluster_resolver,
        master=FLAGS.master,
        model_dir=FLAGS.output_dir,
        save_checkpoints_steps=int(FLAGS.save_checkpoints_steps),
        keep_checkpoint_max=0,
        tpu_config=contrib_tpu.TPUConfig(
            iterations_per_loop=iterations_per_loop,
            num_shards=FLAGS.num_tpu_cores,
            per_host_input_for_training=is_per_host))

    train_examples = None
    if FLAGS.do_train:
        train_examples = processor.get_train_examples(FLAGS.data_dir)

    model_fn = race_utils.model_fn_builder(
        albert_config=albert_config,
        num_labels=len(label_list),
        init_checkpoint=FLAGS.init_checkpoint,
        learning_rate=FLAGS.learning_rate,
        num_train_steps=FLAGS.train_step,
        num_warmup_steps=FLAGS.warmup_step,
        use_tpu=FLAGS.use_tpu,
        use_one_hot_embeddings=FLAGS.use_tpu,
        max_seq_length=FLAGS.max_seq_length,
        dropout_prob=FLAGS.dropout_prob,
        hub_module=FLAGS.albert_hub_module_handle)

    # If TPU is not available, this will fall back to normal Estimator on CPU
    # or GPU.
    estimator = contrib_tpu.TPUEstimator(
        use_tpu=FLAGS.use_tpu,
        model_fn=model_fn,
        config=run_config,
        train_batch_size=FLAGS.train_batch_size,
        eval_batch_size=FLAGS.eval_batch_size,
        predict_batch_size=FLAGS.predict_batch_size)

    if FLAGS.do_train:
        if not tf.gfile.Exists(FLAGS.train_file):
            race_utils.file_based_convert_examples_to_features(
                train_examples, label_list, FLAGS.max_seq_length, tokenizer,
                FLAGS.train_file, FLAGS.max_qa_length)
        tf.logging.info("***** Running training *****")
        tf.logging.info("  Num examples = %d", len(train_examples))
        tf.logging.info("  Batch size = %d", FLAGS.train_batch_size)
        tf.logging.info("  Num steps = %d", FLAGS.train_step)
        train_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=FLAGS.train_file,
            seq_length=FLAGS.max_seq_length,
            is_training=True,
            drop_remainder=True,
            task_name=task_name,
            use_tpu=FLAGS.use_tpu,
            bsz=FLAGS.train_batch_size,
            multiple=len(label_list))
        estimator.train(input_fn=train_input_fn, max_steps=FLAGS.train_step)

    if FLAGS.do_eval:
        eval_examples = processor.get_dev_examples(FLAGS.data_dir)
        num_actual_eval_examples = len(eval_examples)
        if FLAGS.use_tpu:
            # TPU requires a fixed batch size for all batches, therefore the number
            # of examples must be a multiple of the batch size, or else examples
            # will get dropped. So we pad with fake examples which are ignored
            # later on. These do NOT count towards the metric (all tf.metrics
            # support a per-instance weight, and these get a weight of 0.0).
            while len(eval_examples) % FLAGS.eval_batch_size != 0:
                eval_examples.append(classifier_utils.PaddingInputExample())

        if not tf.gfile.Exists(FLAGS.eval_file):
            race_utils.file_based_convert_examples_to_features(
                eval_examples, label_list, FLAGS.max_seq_length, tokenizer,
                FLAGS.eval_file, FLAGS.max_qa_length)

        tf.logging.info("***** Running evaluation *****")
        tf.logging.info("  Num examples = %d (%d actual, %d padding)",
                        len(eval_examples), num_actual_eval_examples,
                        len(eval_examples) - num_actual_eval_examples)
        tf.logging.info("  Batch size = %d", FLAGS.eval_batch_size)

        # This tells the estimator to run through the entire set.
        eval_steps = None
        # However, if running eval on the TPU, you will need to specify the
        # number of steps.
        if FLAGS.use_tpu:
            assert len(eval_examples) % FLAGS.eval_batch_size == 0
            eval_steps = int(len(eval_examples) // FLAGS.eval_batch_size)

        eval_drop_remainder = True if FLAGS.use_tpu else False
        eval_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=FLAGS.eval_file,
            seq_length=FLAGS.max_seq_length,
            is_training=False,
            drop_remainder=eval_drop_remainder,
            task_name=task_name,
            use_tpu=FLAGS.use_tpu,
            bsz=FLAGS.eval_batch_size,
            multiple=len(label_list))

        def _find_valid_cands(curr_step):
            filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
            candidates = []
            for filename in filenames:
                if filename.endswith(".index"):
                    ckpt_name = filename[:-6]
                    idx = ckpt_name.split("-")[-1]
                    if idx != "best" and int(idx) > curr_step:
                        candidates.append(filename)
            return candidates

        output_eval_file = os.path.join(FLAGS.output_dir, "eval_results.txt")
        checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
        key_name = "eval_accuracy"
        if tf.gfile.Exists(checkpoint_path + ".index"):
            result = estimator.evaluate(input_fn=eval_input_fn,
                                        steps=eval_steps,
                                        checkpoint_path=checkpoint_path)
            best_perf = result[key_name]
            global_step = result["global_step"]
        else:
            global_step = -1
            best_perf = -1
            checkpoint_path = None
        writer = tf.gfile.GFile(output_eval_file, "w")
        while global_step < FLAGS.train_step:
            steps_and_files = {}
            filenames = tf.gfile.ListDirectory(FLAGS.output_dir)
            for filename in filenames:
                if filename.endswith(".index"):
                    ckpt_name = filename[:-6]
                    cur_filename = os.path.join(FLAGS.output_dir, ckpt_name)
                    if cur_filename.split("-")[-1] == "best":
                        continue
                    gstep = int(cur_filename.split("-")[-1])
                    if gstep not in steps_and_files:
                        tf.logging.info(
                            "Add {} to eval list.".format(cur_filename))
                        steps_and_files[gstep] = cur_filename
            tf.logging.info("found {} files.".format(len(steps_and_files)))
            # steps_and_files = sorted(steps_and_files, key=lambda x: x[0])
            if not steps_and_files:
                tf.logging.info(
                    "found 0 file, global step: {}. Sleeping.".format(
                        global_step))
                time.sleep(1)
            else:
                for ele in sorted(steps_and_files.items()):
                    step, checkpoint_path = ele
                    if global_step >= step:
                        if len(_find_valid_cands(step)) > 1:
                            for ext in [
                                    "meta", "data-00000-of-00001", "index"
                            ]:
                                src_ckpt = checkpoint_path + ".{}".format(ext)
                                tf.logging.info("removing {}".format(src_ckpt))
                                tf.gfile.Remove(src_ckpt)
                        continue
                    result = estimator.evaluate(
                        input_fn=eval_input_fn,
                        steps=eval_steps,
                        checkpoint_path=checkpoint_path)
                    global_step = result["global_step"]
                    tf.logging.info("***** Eval results *****")
                    for key in sorted(result.keys()):
                        tf.logging.info("  %s = %s", key, str(result[key]))
                        writer.write("%s = %s\n" % (key, str(result[key])))
                    writer.write("best = {}\n".format(best_perf))
                    if result[key_name] > best_perf:
                        best_perf = result[key_name]
                        for ext in ["meta", "data-00000-of-00001", "index"]:
                            src_ckpt = checkpoint_path + ".{}".format(ext)
                            tgt_ckpt = checkpoint_path.rsplit(
                                "-", 1)[0] + "-best.{}".format(ext)
                            tf.logging.info("saving {} to {}".format(
                                src_ckpt, tgt_ckpt))
                            tf.gfile.Copy(src_ckpt, tgt_ckpt, overwrite=True)
                            writer.write("saved {} to {}\n".format(
                                src_ckpt, tgt_ckpt))

                    if len(_find_valid_cands(global_step)) > 1:
                        for ext in ["meta", "data-00000-of-00001", "index"]:
                            src_ckpt = checkpoint_path + ".{}".format(ext)
                            tf.logging.info("removing {}".format(src_ckpt))
                            tf.gfile.Remove(src_ckpt)
                    writer.write("=" * 50 + "\n")
        writer.close()
    if FLAGS.do_predict:
        predict_examples = processor.get_test_examples(FLAGS.data_dir)
        num_actual_predict_examples = len(predict_examples)
        if FLAGS.use_tpu:
            # TPU requires a fixed batch size for all batches, therefore the number
            # of examples must be a multiple of the batch size, or else examples
            # will get dropped. So we pad with fake examples which are ignored
            # later on.
            while len(predict_examples) % FLAGS.predict_batch_size != 0:
                predict_examples.append(classifier_utils.PaddingInputExample())
            assert len(predict_examples) % FLAGS.predict_batch_size == 0
            predict_steps = int(
                len(predict_examples) // FLAGS.predict_batch_size)

        predict_file = os.path.join(FLAGS.output_dir, "predict.tf_record")
        race_utils.file_based_convert_examples_to_features(
            predict_examples, label_list, FLAGS.max_seq_length, tokenizer,
            predict_file, FLAGS.max_qa_length)

        tf.logging.info("***** Running prediction*****")
        tf.logging.info("  Num examples = %d (%d actual, %d padding)",
                        len(predict_examples), num_actual_predict_examples,
                        len(predict_examples) - num_actual_predict_examples)
        tf.logging.info("  Batch size = %d", FLAGS.predict_batch_size)

        predict_drop_remainder = True if FLAGS.use_tpu else False
        predict_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=predict_file,
            seq_length=FLAGS.max_seq_length,
            is_training=False,
            drop_remainder=predict_drop_remainder,
            task_name=task_name,
            use_tpu=FLAGS.use_tpu,
            bsz=FLAGS.predict_batch_size,
            multiple=len(label_list))

        checkpoint_path = os.path.join(FLAGS.output_dir, "model.ckpt-best")
        result = estimator.evaluate(input_fn=predict_input_fn,
                                    steps=predict_steps,
                                    checkpoint_path=checkpoint_path)

        output_predict_file = os.path.join(FLAGS.output_dir,
                                           "predict_results.txt")
        with tf.gfile.GFile(output_predict_file, "w") as pred_writer:
            # num_written_lines = 0
            tf.logging.info("***** Predict results *****")
            pred_writer.write("***** Predict results *****\n")
            for key in sorted(result.keys()):
                tf.logging.info("  %s = %s", key, str(result[key]))
                pred_writer.write("%s = %s\n" % (key, str(result[key])))
            pred_writer.write("best = {}\n".format(best_perf))
コード例 #5
0
def fine_tune_albert(config):
    tf.logging.set_verbosity(tf.logging.INFO)

    if (not config.get("do_train", False) and not config.get("do_eval", False)
            and not config.get("do_predict", False)):
        raise ValueError(
            "At least one of `do_train`, `do_eval` or `do_predict' must be True."
        )

    if not config.get("albert_config_file", None) and not config.get(
            "albert_hub_module_handle", None):
        raise ValueError("At least one of `--albert_config_file` and "
                         "`--albert_hub_module_handle` must be set")

    if config.get("albert_config_file", None):
        albert_config = modeling.AlbertConfig.from_json_file(
            config.get("albert_config_file", None))
        if (config.get("max_seq_length", 512) >
                albert_config.max_position_embeddings):
            raise ValueError(
                "Cannot use sequence length %d because the ALBERT model "
                "was only trained up to sequence length %d" % (
                    config.get("max_seq_length", 512),
                    albert_config.max_position_embeddings,
                ))
    else:
        albert_config = None  # Get the config from TF-Hub.

    tf.gfile.MakeDirs(config.get("output_dir", None))

    task_name = config.get("task_name", None).lower()

    processor = SemEval(config)
    label_list = processor.get_labels()

    tokenizer = fine_tuning_utils.create_vocab(
        vocab_file=config.get("vocab_file", None),
        do_lower_case=config.get("do_lower_case", True),
        spm_model_file=config.get("spm_model_file", None),
        hub_module=config.get("albert_hub_module_handle", None),
    )

    tpu_cluster_resolver = None
    if config.get("use_tpu", False) and config.get("tpu_name", None):
        tpu_cluster_resolver = contrib_cluster_resolver.TPUClusterResolver(
            config.get("tpu_name", None),
            zone=config.get("tpu_zone", None),
            project=config.get("gcp_project", None),
        )

    is_per_host = contrib_tpu.InputPipelineConfig.PER_HOST_V2
    if config.get("do_train", False):
        iterations_per_loop = int(
            min(
                config.get("iterations_per_loop", 1000),
                config.get("save_checkpoints_steps", 1000),
            ))
    else:
        iterations_per_loop = config.get("iterations_per_loop", 1000)
    run_config = contrib_tpu.RunConfig(
        cluster=tpu_cluster_resolver,
        master=config.get("master", None),
        model_dir=config.get("output_dir", None),
        save_checkpoints_steps=int(config.get("save_checkpoints_steps", 1000)),
        keep_checkpoint_max=0,
        tpu_config=contrib_tpu.TPUConfig(
            iterations_per_loop=iterations_per_loop,
            num_shards=config.get("num_tpu_cores", 8),
            per_host_input_for_training=is_per_host,
        ),
    )

    train_examples = None
    if config.get("do_train", False):
        train_examples = processor.get_train_examples()
        num_train_steps = int(
            len(train_examples) / config.get("train_batch_size", 32) *
            config.get("num_train_epochs", 100))
    model_fn = classifier_utils.model_fn_builder(
        albert_config=albert_config,
        num_labels=len(label_list),
        init_checkpoint=config.get("init_checkpoint", None),
        learning_rate=config.get("learning_rate", 5e-5),
        num_train_steps=num_train_steps,
        num_warmup_steps=config.get("warmup_step", 0),
        use_tpu=config.get("use_tpu", False),
        use_one_hot_embeddings=config.get("use_tpu", False),
        task_name=task_name,
        hub_module=config.get("albert_hub_module_handle", None),
        optimizer=config.get("optimizer", None),
    )

    # If TPU is not available, this will fall back to normal Estimator on CPU
    # or GPU.
    estimator = contrib_tpu.TPUEstimator(
        use_tpu=config.get("use_tpu", False),
        model_fn=model_fn,
        config=run_config,
        train_batch_size=config.get("train_batch_size", 32),
        eval_batch_size=config.get("eval_batch_size", 8),
        predict_batch_size=config.get("predict_batch_size", 8),
    )

    if config.get("do_train", False):
        cached_dir = config.get("cached_dir", None)
        if not cached_dir:
            cached_dir = config.get("output_dir", None)
        train_file = os.path.join(cached_dir, task_name + "_train.tf_record")
        if not tf.gfile.Exists(train_file):
            classifier_utils.file_based_convert_examples_to_features(
                train_examples,
                label_list,
                config.get("max_seq_length", 512),
                tokenizer,
                train_file,
                task_name,
            )
        tf.logging.info("***** Running training *****")
        tf.logging.info("  Num examples = %d", len(train_examples))
        tf.logging.info("  Batch size = %d",
                        config.get("train_batch_size", 32))
        tf.logging.info("  Num steps = %d", num_train_steps)
        train_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=train_file,
            seq_length=config.get("max_seq_length", 512),
            is_training=True,
            drop_remainder=True,
            task_name=task_name,
            use_tpu=config.get("use_tpu", False),
            bsz=config.get("train_batch_size", 32),
        )
        estimator.train(input_fn=train_input_fn, max_steps=num_train_steps)

    if config.get("do_eval", False):
        eval_examples = processor.get_dev_examples()
        num_actual_eval_examples = len(eval_examples)
        if config.get("use_tpu", False):
            # TPU requires a fixed batch size for all batches, therefore the number
            # of examples must be a multiple of the batch size, or else examples
            # will get dropped. So we pad with fake examples which are ignored
            # later on. These do NOT count towards the metric (all tf.metrics
            # support a per-instance weight, and these get a weight of 0.0).
            while len(eval_examples) % config.get("eval_batch_size", 8) != 0:
                eval_examples.append(classifier_utils.PaddingInputExample())

        cached_dir = config.get("cached_dir", None)
        if not cached_dir:
            cached_dir = config.get("output_dir", None)
        eval_file = os.path.join(cached_dir, task_name + "_eval.tf_record")
        if not tf.gfile.Exists(eval_file):
            classifier_utils.file_based_convert_examples_to_features(
                eval_examples,
                label_list,
                config.get("max_seq_length", 512),
                tokenizer,
                eval_file,
                task_name,
            )

        tf.logging.info("***** Running evaluation *****")
        tf.logging.info(
            "  Num examples = %d (%d actual, %d padding)",
            len(eval_examples),
            num_actual_eval_examples,
            len(eval_examples) - num_actual_eval_examples,
        )
        tf.logging.info("  Batch size = %d", config.get("eval_batch_size", 8))

        # This tells the estimator to run through the entire set.
        eval_steps = None
        # However, if running eval on the TPU, you will need to specify the
        # number of steps.
        if config.get("use_tpu", False):
            assert len(eval_examples) % config.get("eval_batch_size", 8) == 0
            eval_steps = int(
                len(eval_examples) // config.get("eval_batch_size", 8))

        eval_drop_remainder = True if config.get("use_tpu", False) else False
        eval_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=eval_file,
            seq_length=config.get("max_seq_length", 512),
            is_training=False,
            drop_remainder=eval_drop_remainder,
            task_name=task_name,
            use_tpu=config.get("use_tpu", False),
            bsz=config.get("eval_batch_size", 8),
        )

        best_trial_info_file = os.path.join(config.get("output_dir", None),
                                            "best_trial.txt")

        def _best_trial_info():
            """Returns information about which checkpoints have been evaled so far."""
            if tf.gfile.Exists(best_trial_info_file):
                with tf.gfile.GFile(best_trial_info_file, "r") as best_info:
                    (
                        global_step,
                        best_metric_global_step,
                        metric_value,
                    ) = best_info.read().split(":")
                    global_step = int(global_step)
                    best_metric_global_step = int(best_metric_global_step)
                    metric_value = float(metric_value)
            else:
                metric_value = -1
                best_metric_global_step = -1
                global_step = -1
            tf.logging.info(
                "Best trial info: Step: %s, Best Value Step: %s, "
                "Best Value: %s",
                global_step,
                best_metric_global_step,
                metric_value,
            )
            return global_step, best_metric_global_step, metric_value

        def _remove_checkpoint(checkpoint_path):
            for ext in ["meta", "data-00000-of-00001", "index"]:
                src_ckpt = checkpoint_path + ".{}".format(ext)
                tf.logging.info("removing {}".format(src_ckpt))
                tf.gfile.Remove(src_ckpt)

        def _find_valid_cands(curr_step):
            filenames = tf.gfile.ListDirectory(config.get("output_dir", None))
            candidates = []
            for filename in filenames:
                if filename.endswith(".index"):
                    ckpt_name = filename[:-6]
                    idx = ckpt_name.split("-")[-1]
                    if int(idx) > curr_step:
                        candidates.append(filename)
            return candidates

        output_eval_file = os.path.join(config.get("output_dir", None),
                                        "eval_results.txt")

        if task_name == "sts-b":
            key_name = "pearson"
        elif task_name == "cola":
            key_name = "matthew_corr"
        else:
            key_name = "eval_accuracy"

        global_step, best_perf_global_step, best_perf = _best_trial_info()
        writer = tf.gfile.GFile(output_eval_file, "w")
        while global_step < num_train_steps:
            steps_and_files = {}
            filenames = tf.gfile.ListDirectory(config.get("output_dir", None))
            for filename in filenames:
                if filename.endswith(".index"):
                    ckpt_name = filename[:-6]
                    cur_filename = os.path.join(config.get("output_dir", None),
                                                ckpt_name)
                    if cur_filename.split("-")[-1] == "best":
                        continue
                    gstep = int(cur_filename.split("-")[-1])
                    if gstep not in steps_and_files:
                        tf.logging.info(
                            "Add {} to eval list.".format(cur_filename))
                        steps_and_files[gstep] = cur_filename
            tf.logging.info("found {} files.".format(len(steps_and_files)))
            if not steps_and_files:
                tf.logging.info(
                    "found 0 file, global step: {}. Sleeping.".format(
                        global_step))
                time.sleep(60)
            else:
                for checkpoint in sorted(steps_and_files.items()):
                    step, checkpoint_path = checkpoint
                    if global_step >= step:
                        if (best_perf_global_step != step
                                and len(_find_valid_cands(step)) > 1):
                            _remove_checkpoint(checkpoint_path)
                        continue
                    result = estimator.evaluate(
                        input_fn=eval_input_fn,
                        steps=eval_steps,
                        checkpoint_path=checkpoint_path,
                    )
                    global_step = result["global_step"]
                    tf.logging.info("***** Eval results *****")
                    for key in sorted(result.keys()):
                        tf.logging.info("  %s = %s", key, str(result[key]))
                        writer.write("%s = %s\n" % (key, str(result[key])))
                    writer.write("best = {}\n".format(best_perf))
                    if result[key_name] > best_perf:
                        best_perf = result[key_name]
                        best_perf_global_step = global_step
                    elif len(_find_valid_cands(global_step)) > 1:
                        _remove_checkpoint(checkpoint_path)
                    writer.write("=" * 50 + "\n")
                    writer.flush()
                    with tf.gfile.GFile(best_trial_info_file,
                                        "w") as best_info:
                        best_info.write("{}:{}:{}".format(
                            global_step, best_perf_global_step, best_perf))
        writer.close()

        for ext in ["meta", "data-00000-of-00001", "index"]:
            src_ckpt = "model.ckpt-{}.{}".format(best_perf_global_step, ext)
            tgt_ckpt = "model.ckpt-best.{}".format(ext)
            tf.logging.info("saving {} to {}".format(src_ckpt, tgt_ckpt))
            tf.io.gfile.rename(
                os.path.join(config.get("output_dir", None), src_ckpt),
                os.path.join(config.get("output_dir", None), tgt_ckpt),
                overwrite=True,
            )

    if config.get("do_predict", False):
        predict_examples = processor.get_test_examples()
        num_actual_predict_examples = len(predict_examples)
        if config.get("use_tpu", False):
            # TPU requires a fixed batch size for all batches, therefore the number
            # of examples must be a multiple of the batch size, or else examples
            # will get dropped. So we pad with fake examples which are ignored
            # later on.
            while (len(predict_examples) % config.get("predict_batch_size", 8)
                   != 0):
                predict_examples.append(classifier_utils.PaddingInputExample())

        predict_file = os.path.join(config.get("output_dir", None),
                                    "predict.tf_record")
        classifier_utils.file_based_convert_examples_to_features(
            predict_examples,
            label_list,
            config.get("max_seq_length", 512),
            tokenizer,
            predict_file,
            task_name,
        )

        tf.logging.info("***** Running prediction*****")
        tf.logging.info(
            "  Num examples = %d (%d actual, %d padding)",
            len(predict_examples),
            num_actual_predict_examples,
            len(predict_examples) - num_actual_predict_examples,
        )
        tf.logging.info("  Batch size = %d",
                        config.get("predict_batch_size", 8))

        predict_drop_remainder = (True
                                  if config.get("use_tpu", False) else False)
        predict_input_fn = classifier_utils.file_based_input_fn_builder(
            input_file=predict_file,
            seq_length=config.get("max_seq_length", 512),
            is_training=False,
            drop_remainder=predict_drop_remainder,
            task_name=task_name,
            use_tpu=config.get("use_tpu", False),
            bsz=config.get("predict_batch_size", 8),
        )

        checkpoint_path = os.path.join(config.get("output_dir", None),
                                       "model.ckpt-best")
        result = estimator.predict(input_fn=predict_input_fn,
                                   checkpoint_path=checkpoint_path)

        output_predict_file = os.path.join(config.get("output_dir", None),
                                           "test_results.tsv")
        output_submit_file = os.path.join(config.get("output_dir", None),
                                          "submit_results.tsv")
        with tf.gfile.GFile(output_predict_file,
                            "w") as pred_writer, tf.gfile.GFile(
                                output_submit_file, "w") as sub_writer:
            sub_writer.write("index" + "\t" + "prediction\n")
            num_written_lines = 0
            tf.logging.info("***** Predict results *****")
            for (i, (example,
                     prediction)) in enumerate(zip(predict_examples, result)):
                probabilities = prediction["probabilities"]
                if i >= num_actual_predict_examples:
                    break
                output_line = ("\t".join(
                    str(class_probability)
                    for class_probability in probabilities) + "\n")
                pred_writer.write(output_line)

                if task_name != "sts-b":
                    actual_label = label_list[int(prediction["predictions"])]
                else:
                    actual_label = str(prediction["predictions"])
                sub_writer.write(example.guid + "\t" + actual_label + "\n")
                num_written_lines += 1
        assert num_written_lines == num_actual_predict_examples
コード例 #6
0
        "input_ids": input_ids,
        "input_mask": input_mask,
        "segment_ids": segment_ids
    }
    return tf.estimator.export.ServingInputReceiver(features=inputs,
                                                    receiver_tensors=inputs)

  return _seq_serving_input_fn

albert_hub_module_handle = None #'https://tfhub.dev/google/albert_base/3'
vocab_file = '../albert-base/assets/30k-clean.vocab'
spm_model_file = '../albert-base/assets/30k-clean.model'
do_lower_case = True

tokenizer = fine_tuning_utils.create_vocab(
    vocab_file=vocab_file,
    do_lower_case=do_lower_case,
    spm_model_file=spm_model_file,
    hub_module=albert_hub_module_handle)


squad_utils.convert_examples_to_features(
     examples=train_examples,
     tokenizer=tokenizer,
     max_seq_length=FLAGS.max_seq_length,
     doc_stride=FLAGS.doc_stride,
     max_query_length=FLAGS.max_query_length,
     is_training=True,
     output_fn=train_writer.process_feature,
     do_lower_case=do_lower_case)