def submit( self, jobNum ):
"""
Submit the first step of the workflow to the queue
"""
xmlPath = self.tempDirectory + str( jobNum ) + '.xml'
job = Job( '', xmlPath )
job.submit()
return S_OK()
def execute( self, jobNum ):
"""
Execute the first step of the workflow locally
"""
xmlPath = self.tempDirectory + str( jobNum ) + '.xml'
job = Job( '', xmlPath )
job.execute()
return S_OK()
def generate( self, jobNum ):
"""
Generate option files of all steps
"""
xmlPath = self.tempDirectory + str( jobNum ) + '.xml'
job = Job( '', xmlPath )
job.generate()
return S_OK()
def push(self, jobID):
"""
Submit the next step of the workflow
"""
xmlPath = self.tempDirectory + str(jobID) + '.xml'
if not os.path.exists(xmlPath):
return S_ERROR('Can not find workflow %s' % jobID)
job = Job('', xmlPath)
job.push()
return S_OK()
def submit(self, jobID):
"""
Submit the first step of the workflow to the queue
"""
xmlPath = self.tempDirectory + str(jobID) + '.xml'
if not os.path.exists(xmlPath):
return S_ERROR('Can not find workflow %s' % jobID)
job = Job('', xmlPath)
job.submit()
return S_OK()
def generate(self, jobID):
"""
Generate option files of all steps
"""
xmlPath = self.tempDirectory + str(jobID) + '.xml'
if not os.path.exists(xmlPath):
return S_ERROR('Can not find workflow %s' % jobID)
job = Job('', xmlPath)
job.generate()
return S_OK()
def resubmit( self, infoDict ):
"""
Re-submit sub-jobs of a workflow
infoDict{'jobNum':workflowID, 'stepNum':stepID, 'optionList':[optionNames...]}
"""
jobNum = infoDict['jobNum']
tempJob = Job( '', self.tempDirectory + str( jobNum ) + '.xml' )
stepNum = infoDict['stepNum']
opstep = tempJob.workflow.steps[int(stepNum)]
stepName = opstep.name
optionTempDirectory = ''
for p in opstep.parameters:
if p.name == 'optionFileDirectory':
if p.value[-1] == '/':
optionTempDirectory = p.value
else:
optionTempDirectory = p.value + '/'
if not optionTempDirectory:
optionDirectory = self.tempDirectory + 'workflowTemp/' + str( tempJob.jobNum ) + '/' + stepName + '/'
else:
optionDirectory = optionTempDirectory
for optionFile in infoDict['optionList']:
os.chdir( optionDirectory )
os.system( 'boss -q %s' % optionFile )
return S_OK()