def validate( self, required = None, other = None ):
required_left_over, required_missing \
= self._validate_helper( required, other )
other_left_over, other_missing \
= self._validate_helper( other, required )
assert_( required_left_over == other_left_over )
if other_left_over and self.verbose:
output( 'left over:', other_left_over )
if required_missing:
raise ValueError('required missing: %s' % required_missing)
return other_missing
def validate( self, required = None, other = None ):
required_left_over, required_missing \
= self._validate_helper( required, other )
other_left_over, other_missing \
= self._validate_helper( other, required )
assert_( required_left_over == other_left_over )
err = False
if required_missing:
err = True
output( 'error: required missing:', required_missing )
if other_left_over:
output( 'left over:', other_left_over )
if err:
raise ValueError
return other_missing
def explode_groups(self, eps, return_emap=False):
"""
Explode the mesh element groups by `eps`, i.e. split group
interface nodes and shrink each group towards its centre by
`eps`.
Parameters
----------
eps : float in `[0.0, 1.0]`
The group shrinking factor.
return_emap : bool, optional
If True, also return the mapping against original mesh
coordinates that result in the exploded mesh coordinates.
The mapping can be used to map mesh vertex data to the
exploded mesh vertices.
Returns
-------
mesh : Mesh
The new mesh with exploded groups.
emap : spmatrix, optional
The maping for exploding vertex values. Only provided if
`return_emap` is True.
"""
assert_(0.0 <= eps <= 1.0)
remap = nm.empty((self.n_nod, ), dtype=nm.int32)
offset = 0
if return_emap:
rows, cols = [], []
coors = []
ngroups = []
conns = []
mat_ids = []
descs = []
for ig, conn in enumerate(self.conns):
nodes = nm.unique(conn)
group_coors = self.coors[nodes]
n_nod = group_coors.shape[0]
centre = group_coors.sum(axis=0) / float(n_nod)
vectors = group_coors - centre[None, :]
new_coors = centre + (vectors * eps)
remap[nodes] = nm.arange(n_nod, dtype=nm.int32) + offset
new_conn = remap[conn]
coors.append(new_coors)
ngroups.append(self.ngroups[nodes])
conns.append(new_conn)
mat_ids.append(self.mat_ids[ig])
descs.append(self.descs[ig])
offset += n_nod
if return_emap:
cols.append(nodes)
rows.append(remap[nodes])
coors = nm.concatenate(coors, axis=0)
ngroups = nm.concatenate(ngroups, axis=0)
mesh = Mesh.from_data('exploded_' + self.name, coors, ngroups, conns,
mat_ids, descs)
if return_emap:
rows = nm.concatenate(rows)
cols = nm.concatenate(cols)
data = nm.ones(rows.shape[0], dtype=nm.float64)
emap = sp.coo_matrix((data, (rows, cols)),
shape=(mesh.n_nod, self.n_nod))
return mesh, emap
else:
return mesh
def explode_groups(self, eps, return_emap=False):
"""
Explode the mesh element groups by `eps`, i.e. split group
interface nodes and shrink each group towards its centre by
`eps`.
Parameters
----------
eps : float in `[0.0, 1.0]`
The group shrinking factor.
return_emap : bool, optional
If True, also return the mapping against original mesh
coordinates that result in the exploded mesh coordinates.
The mapping can be used to map mesh vertex data to the
exploded mesh vertices.
Returns
-------
mesh : Mesh
The new mesh with exploded groups.
emap : spmatrix, optional
The maping for exploding vertex values. Only provided if
`return_emap` is True.
"""
assert_(0.0 <= eps <= 1.0)
remap = nm.empty((self.n_nod,), dtype=nm.int32)
offset = 0
if return_emap:
rows, cols = [], []
coors = []
ngroups = []
conns = []
mat_ids = []
descs = []
for ig, conn in enumerate(self.conns):
nodes = nm.unique(conn)
group_coors = self.coors[nodes]
n_nod = group_coors.shape[0]
centre = group_coors.sum(axis=0) / float(n_nod)
vectors = group_coors - centre[None, :]
new_coors = centre + (vectors * eps)
remap[nodes] = nm.arange(n_nod, dtype=nm.int32) + offset
new_conn = remap[conn]
coors.append(new_coors)
ngroups.append(self.ngroups[nodes])
conns.append(new_conn)
mat_ids.append(self.mat_ids[ig])
descs.append(self.descs[ig])
offset += n_nod
if return_emap:
cols.append(nodes)
rows.append(remap[nodes])
coors = nm.concatenate(coors, axis=0)
ngroups = nm.concatenate(ngroups, axis=0)
mesh = Mesh.from_data('exploded_' + self.name,
coors, ngroups, conns, mat_ids, descs)
if return_emap:
rows = nm.concatenate(rows)
cols = nm.concatenate(cols)
data = nm.ones(rows.shape[0], dtype=nm.float64)
emap = sp.coo_matrix((data, (rows, cols)),
shape=(mesh.n_nod, self.n_nod))
return mesh, emap
else:
return mesh