def on_remove_button_clicked(self, button, data=None):
"""
removes the currently selected synonym from the list of synonyms for
this species
"""
# TODO: maybe we should only ask 'are you sure' if the selected value
# is an instance, this means it will be deleted from the database
tree = self.view.widgets.fam_syn_treeview
path, col = tree.get_cursor()
tree_model = tree.get_model()
value = tree_model[tree_model.get_iter(path)][0]
# debug('%s: %s' % (value, type(value)))
s = Family.str(value.synonym)
msg = (
"Are you sure you want to remove %s as a synonym to the "
"current family?\n\n<i>Note: This will not remove the family "
"%s from the database.</i>" % (s, s)
)
if utils.yes_no_dialog(msg, parent=self.view.get_window()):
tree_model.remove(tree_model.get_iter(path))
self.model.synonyms.remove(value.synonym)
utils.delete_or_expunge(value)
self.session.flush([value])
self._dirty = True
self.refresh_sensitivity()
def on_remove_button_clicked(self, button, data=None):
"""
Removes the currently selected vernacular name from the view.
"""
tree = self.view.widgets.vern_treeview
path, col = tree.get_cursor()
treemodel = tree.get_model()
vn = treemodel[path][0]
msg = _('Are you sure you want to remove the vernacular '
'name <b>%s</b>?') % utils.xml_safe(vn.name)
if vn.name and not vn in self.session.new and not \
utils.yes_no_dialog(msg, parent=self.view.get_window()):
return
treemodel.remove(treemodel.get_iter(path))
self.model.vernacular_names.remove(vn)
utils.delete_or_expunge(vn)
if not self.model.default_vernacular_name:
# if there is only one value in the tree then set it as the
# default vernacular name
first = treemodel.get_iter_first()
if first:
# self.set_model_attr('default_vernacular_name',
# tree_model[first][0])
self.model.default_vernacular_name = treemodel[first][0]
self.parent_ref().refresh_sensitivity()
self._dirty = True
def on_remove_button_clicked(self, button, data=None):
"""
Removes the currently selected vernacular name from the view.
"""
tree = self.view.widgets.vern_treeview
path, col = tree.get_cursor()
treemodel = tree.get_model()
vn = treemodel[path][0]
msg = _('Are you sure you want to remove the vernacular '
'name <b>%s</b>?') % utils.xml_safe(vn.name)
if vn.name and not vn in self.session.new and not \
utils.yes_no_dialog(msg, parent=self.view.get_window()):
return
treemodel.remove(treemodel.get_iter(path))
self.model.vernacular_names.remove(vn)
utils.delete_or_expunge(vn)
if not self.model.default_vernacular_name:
# if there is only one value in the tree then set it as the
# default vernacular name
first = treemodel.get_iter_first()
if first:
# self.set_model_attr('default_vernacular_name',
# tree_model[first][0])
self.model.default_vernacular_name = treemodel[first][0]
self.parent_ref().refresh_sensitivity()
self._dirty = True
def on_remove_button_clicked(self, button, data=None):
"""
removes the currently selected synonym from the list of synonyms for
this species
"""
# TODO: maybe we should only ask 'are you sure' if the selected value
# is an instance, this means it will be deleted from the database
tree = self.view.widgets.sp_syn_treeview
path, col = tree.get_cursor()
tree_model = tree.get_model()
value = tree_model[tree_model.get_iter(path)][0]
s = Species.str(value.synonym, markup=True)
msg = (
"Are you sure you want to remove %s as a synonym to the "
"current species?\n\n<i>Note: This will not remove the species "
"%s from the database.</i>" % (s, s)
)
if not utils.yes_no_dialog(msg, parent=self.view.get_window()):
return
tree_model.remove(tree_model.get_iter(path))
self.model.synonyms.remove(value.synonym)
utils.delete_or_expunge(value)
# TODO: ** important ** this doesn't respect any unique
# contraints on the species for synonyms and allow a
# species to have another species as a synonym multiple
# times...see below
# TODO: using session.flush here with an argument is
# deprecated in SA 0.5 and will probably removed in SA
# 0.6...but how do we only flush the one value..unless we
# create a new session, merge it, commit that session,
# close it and then refresh the same object in
# self.session
# make the change in synonym immediately available so that if
# we try to add the same species again we don't break the
# SpeciesSynonym UniqueConstraint
# tmp_session = db.Session()
# tmp_value = tmp.session.merge(value)
# tmp.session.commit()
# tmp.session.close()
# self.session.refresh(value)
# self.session.flush([value])
self._dirty = True
self.parent_ref().refresh_sensitivity()
def commit_changes(self):
# if self.model.sp or cv_group is empty and
# self.model.infrasp_rank=='cv.' and self.model.infrasp
# then show a dialog saying we can't commit and return
# if self.model.hybrid is None and self.model.infrasp_rank is None:
# self.model.infrasp = None
# self.model.infrasp_author = None
# self.model.cv_group = None
# remove incomplete vernacular names
for vn in self.model.vernacular_names:
if vn.name in (None, ''):
self.model.vernacular_names.remove(vn)
utils.delete_or_expunge(vn)
del vn
super(SpeciesEditorMenuItem, self).commit_changes()
def commit_changes(self):
# if self.model.sp or cv_group is empty and
# self.model.infrasp_rank=='cv.' and self.model.infrasp
# then show a dialog saying we can't commit and return
# if self.model.hybrid is None and self.model.infrasp_rank is None:
# self.model.infrasp = None
# self.model.infrasp_author = None
# self.model.cv_group = None
# remove incomplete vernacular names
for vn in self.model.vernacular_names:
if vn.name in (None, ''):
self.model.vernacular_names.remove(vn)
utils.delete_or_expunge(vn)
del vn
super(SpeciesEditorMenuItem, self).commit_changes()
def on_remove_button_clicked(self, button, data=None):
'''
removes the currently selected synonym from the list of synonyms for
this species
'''
# TODO: maybe we should only ask 'are you sure' if the selected value
# is an instance, this means it will be deleted from the database
tree = self.view.widgets.sp_syn_treeview
path, col = tree.get_cursor()
tree_model = tree.get_model()
value = tree_model[tree_model.get_iter(path)][0]
s = Species.str(value.synonym, markup=True)
msg = 'Are you sure you want to remove %s as a synonym to the ' \
'current species?\n\n<i>Note: This will not remove the species '\
'%s from the database.</i>' % (s, s)
if not utils.yes_no_dialog(msg, parent=self.view.get_window()):
return
tree_model.remove(tree_model.get_iter(path))
self.model.synonyms.remove(value.synonym)
utils.delete_or_expunge(value)
# TODO: ** important ** this doesn't respect any unique
# contraints on the species for synonyms and allow a
# species to have another species as a synonym multiple
# times...see below
# TODO: using session.flush here with an argument is
# deprecated in SA 0.5 and will probably removed in SA
# 0.6...but how do we only flush the one value..unless we
# create a new session, merge it, commit that session,
# close it and then refresh the same object in
# self.session
# make the change in synonym immediately available so that if
# we try to add the same species again we don't break the
# SpeciesSynonym UniqueConstraint
# tmp_session = db.Session()
# tmp_value = tmp.session.merge(value)
# tmp.session.commit()
# tmp.session.close()
# self.session.refresh(value)
#self.session.flush([value])
self._dirty = True
self.parent_ref().refresh_sensitivity()
def on_remove_button_clicked(self, button, data=None):
'''
removes the currently selected synonym from the list of synonyms for
this species
'''
# TODO: maybe we should only ask 'are you sure' if the selected value
# is an instance, this means it will be deleted from the database
tree = self.view.widgets.gen_syn_treeview
path, col = tree.get_cursor()
tree_model = tree.get_model()
value = tree_model[tree_model.get_iter(path)][0]
s = Genus.str(value.synonym)
msg = _('Are you sure you want to remove %(genus)s as a synonym to '
'the current genus?\n\n<i>Note: This will not remove the '
'genus from the database.</i>') % {'genus': s}
if utils.yes_no_dialog(msg, parent=self.view.get_window()):
tree_model.remove(tree_model.get_iter(path))
self.model.synonyms.remove(value.synonym)
utils.delete_or_expunge(value)
self.session.flush([value])
self._dirty = True
self.refresh_sensitivity()
def on_remove_button_clicked(self, button, data=None):
'''
removes the currently selected synonym from the list of synonyms for
this species
'''
# TODO: maybe we should only ask 'are you sure' if the selected value
# is an instance, this means it will be deleted from the database
tree = self.view.widgets.gen_syn_treeview
path, col = tree.get_cursor()
tree_model = tree.get_model()
value = tree_model[tree_model.get_iter(path)][0]
s = Genus.str(value.synonym)
msg = _('Are you sure you want to remove %(genus)s as a synonym to '
'the current genus?\n\n<i>Note: This will not remove the '
'genus from the database.</i>') % {'genus': s}
if utils.yes_no_dialog(msg, parent=self.view.get_window()):
tree_model.remove(tree_model.get_iter(path))
self.model.synonyms.remove(value.synonym)
utils.delete_or_expunge(value)
self.session.flush([value])
self._dirty = True
self.refresh_sensitivity()
def clean_model(self):
if self.model.prop_type == u'UnrootedCutting':
utils.delete_or_expunge(self.model._seed)
self.model._seed = None
#del self.model._seed
if not self.model._cutting.bottom_heat_temp:
self.model._cutting.bottom_heat_unit = None
if not self.model._cutting.length:
self.model._cutting.length_unit = None
elif self.model.prop_type == u'Seed':
utils.delete_or_expunge(self.model._cutting)
self.model._cutting = None
#del self.model._cutting
else:
utils.delete_or_expunge(self.model._seed)
utils.delete_or_expunge(self.model._cutting)
def clean_model(self):
if self.model.prop_type == u'UnrootedCutting':
utils.delete_or_expunge(self.model._seed)
self.model._seed = None
#del self.model._seed
if not self.model._cutting.bottom_heat_temp:
self.model._cutting.bottom_heat_unit = None
if not self.model._cutting.length:
self.model._cutting.length_unit = None
elif self.model.prop_type == u'Seed':
utils.delete_or_expunge(self.model._cutting)
self.model._cutting = None
#del self.model._cutting
else:
utils.delete_or_expunge(self.model._seed)
utils.delete_or_expunge(self.model._cutting)
def _del_default_vernacular_name(self):
utils.delete_or_expunge(self._default_vernacular_name)
del self._default_vernacular_name
def commit_changes(self):
"""
"""
codes = utils.range_builder(self.model.code)
if len(codes) <= 1 or self.model not in self.session.new \
and not self.branched_plant:
change = self.presenter.change
if self.branched_plant:
# branch mode
self.branched_plant.quantity -= self.model.quantity
change.parent_plant = self.branched_plant
if not change.to_location:
change.to_location = self.model.location
elif change.quantity is None \
or (change.quantity == self.model.quantity and \
change.from_location == self.model.location and \
change.quantity==self.presenter._original_quantity):
# if the quantity and location haven't changed then
# don't save the change
# UPDATE:
# TODO: why save the change, what if we want to indicate
# a change even if the quantity and location hasn't
# changed?
utils.delete_or_expunge(change)
self.model.change = None
else:
if self.model.location != change.from_location:
# transfer
change.to_location = self.model.location
elif self.model.quantity > self.presenter._original_quantity \
and not change.to_location:
# additions should use to_location
change.to_location = self.model.location
change.from_location = None
else:
# removal
change.quantity = -change.quantity
super(PlantEditor, self).commit_changes()
self._committed.append(self.model)
return
# this method will create new plants from self.model even if
# the plant code is not a range....its a small price to pay
plants = []
mapper = object_mapper(self.model)
# TODO: precompute the _created and _last_updated attributes
# incase we have to create lots of plants it won't be too slow
# we have to set the properties on the new objects
# individually since session.merge won't create a new object
# since the object is already in the session
import sqlalchemy.orm as orm
for code in codes:
new_plant = Plant()
self.session.add(new_plant)
# TODO: can't we user Plant.duplicate here
ignore = ('changes', 'notes', 'propagations')
for prop in mapper.iterate_properties:
if prop.key not in ignore:
setattr(new_plant, prop.key, getattr(self.model, prop.key))
new_plant.code = utils.utf8(code)
new_plant.id = None
new_plant._created = None
new_plant._last_updated = None
plants.append(new_plant)
for note in self.model.notes:
new_note = PlantNote()
for prop in object_mapper(note).iterate_properties:
setattr(new_note, prop.key, getattr(note, prop.key))
new_note.plant = new_plant
try:
map(self.session.expunge, self.model.notes)
self.session.expunge(self.model)
super(PlantEditor, self).commit_changes()
except:
self.session.add(self.model)
raise
self._committed.extend(plants)
def on_activate_remove_menu_item(self, widget, dist):
self.model.distribution.remove(dist)
utils.delete_or_expunge(dist)
self.refresh_view()
self._dirty = True
self.parent_ref().refresh_sensitivity()
def on_activate_remove_menu_item(self, widget, dist):
self.model.distribution.remove(dist)
utils.delete_or_expunge(dist)
self.refresh_view()
self._dirty = True
self.parent_ref().refresh_sensitivity()
def _del_default_vernacular_name(self):
utils.delete_or_expunge(self._default_vernacular_name)
del self._default_vernacular_name
