def test_updating_phenotype(demo_db_path):
con = database.ConnectDatabase(demo_db_path)
od = admin_tools.OperateDatabase()
phenotype = (1, 1, "A", "T", "synaptical", 1)
out = od.updating_phenotype(con, phenotype)
assert "The table phenotype has been updated. Call -p to see the changes." in out
def test_delete_data_phenotype_error(tmpdir):
path_db = str(tmpdir.join("test.sqlite3"))
con = database.ConnectDatabase(path_db)
od = admin_tools.OperateDatabase()
out = od.delete_data_phenotype(con, "1")
assert "An error has occured:" in out
def test_updating_populations(demo_db_path):
con = database.ConnectDatabase(demo_db_path)
od = admin_tools.OperateDatabase()
populations = (1, 1, "A", "T", 4, 3, 4, 0, 0, 3, "GER", 1)
out = od.updating_populations(con, populations)
assert "The table populations has been updated. Call -p to see the changes." in out
def test_updating_allel(demo_db_path):
con = database.ConnectDatabase(demo_db_path)
od = admin_tools.OperateDatabase()
allel = (1, 1, "A", "T", 4, 3, 4, 0, 0, 3)
out = od.updating_allel(con, allel)
assert "The table allel has been updated. Call -p to see the changes." in out
def test_count_variants_error(tmpdir):
path_db = str(tmpdir.join("test.sqlite3"))
con = database.ConnectDatabase(path_db)
od = admin_tools.OperateDatabase()
out = od.count_variants(con)
assert "An error has occured:" in out
def test_count_variants(demo_db_path):
con = database.ConnectDatabase(demo_db_path)
od = admin_tools.OperateDatabase()
out = od.count_variants(con)
assert out is not None
assert out == 3
def test_print_db_error(tmpdir):
path_db = str(tmpdir.join("test.sqlite3"))
conn = database.ConnectDatabase(path_db)
od = admin_tools.OperateDatabase()
out = od.print_db(conn)
assert "An error has occured:" in out