def test_cc_background(self):
"""
Added after finding a ?bug? in which Cheng and Church's
column matrix would be transposed for certain datasets, and
not for others.
It seems to happen when Cheng and Church finds the whole
dataset as a bicluster; this often happens when delta is large.
"""
data, exp = bb.make_shift_data(background_scale=0)
fnd = bb.cheng_church(self.data, delta=0.5)
def test_cc_background(self):
"""
Added after finding a ?bug? in which Cheng and Church's
column matrix would be transposed for certain datasets, and
not for others.
It seems to happen when Cheng and Church finds the whole
dataset as a bicluster; this often happens when delta is large.
"""
data, exp = bb.make_shift_data(background_scale=0)
fnd = bb.cheng_church(self.data, delta=0.5)
def setUp(self):
self.data, exp = bb.make_shift_data()
def setUp(self):
self.data, exp = bb.make_shift_data()