def publishFromHTML(self, aruid, results_html):
# The AR can be published only and only if allowed
uc = getToolByName(self.context, 'uid_catalog')
ars = uc(UID=aruid)
if not ars or len(ars) != 1:
return []
ar = ars[0].getObject();
wf = getToolByName(ar, 'portal_workflow')
allowed_states = ['verified', 'published']
# Publish/Republish allowed?
if wf.getInfoFor(ar, 'review_state') not in allowed_states:
# Pre-publish allowed?
if not ar.getAnalyses(review_state=allowed_states):
return []
# HTML written to debug file
debug_mode = App.config.getConfiguration().debug_mode
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".html")
logger.debug("Writing HTML for %s to %s" % (ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(results_html)
# Create the pdf report (will always be attached to the AR)
# we must supply the file ourself so that createPdf leaves it alone.
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf_report = createPdf(htmlreport=results_html, outfile=pdf_fn)
# PDF written to debug file
if debug_mode:
logger.debug("Writing PDF for %s to %s" % (ar.Title(), pdf_fn))
else:
os.remove(pdf_fn)
recipients = []
contact = ar.getContact()
lab = ar.bika_setup.laboratory
if pdf_report:
if contact:
recipients = [{
'UID': contact.UID(),
'Username': to_utf8(contact.getUsername()),
'Fullname': to_utf8(contact.getFullname()),
'EmailAddress': to_utf8(contact.getEmailAddress()),
'PublicationModes': contact.getPublicationPreference()
}]
reportid = ar.generateUniqueId('ARReport')
report = _createObjectByType("ARReport", ar, reportid)
report.edit(
AnalysisRequest=ar.UID(),
Pdf=pdf_report,
Html=results_html,
Recipients=recipients
)
report.unmarkCreationFlag()
renameAfterCreation(report)
# Set status to prepublished/published/republished
status = wf.getInfoFor(ar, 'review_state')
transitions = {'verified': 'publish',
'published' : 'republish'}
transition = transitions.get(status, 'prepublish')
try:
wf.doActionFor(ar, transition)
except WorkflowException:
pass
# compose and send email.
# The managers of the departments for which the current AR has
# at least one AS must receive always the pdf report by email.
# https://github.com/bikalabs/Bika-LIMS/issues/1028
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
to = []
mngrs = ar.getResponsible()
for mngrid in mngrs['ids']:
name = mngrs['dict'][mngrid].get('name', '')
email = mngrs['dict'][mngrid].get('email', '')
if (email != ''):
to.append(formataddr((encode_header(name), email)))
if len(to) > 0:
# Send the email to the managers
mime_msg['To'] = ','.join(to)
attachPdf(mime_msg, pdf_report, pdf_fn)
try:
host = getToolByName(ar, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
# Send report to recipients
recips = self.get_recipients(ar)
for recip in recips:
if 'email' not in recip.get('pubpref', []) \
or not recip.get('email', ''):
continue
title = encode_header(recip.get('title', ''))
email = recip.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object, cause the previous one
# has the pdf already attached
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report and 'pdf' in recip.get('pubpref'):
attachPdf(mime_msg, pdf_report, pdf_fn)
# For now, I will simply ignore mail send under test.
if hasattr(self.portal, 'robotframework'):
continue
msg_string = mime_msg.as_string()
# content of outgoing email written to debug file
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".email")
logger.debug("Writing MIME message for %s to %s" % (ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(msg_string)
try:
host = getToolByName(ar, 'MailHost')
host.send(msg_string, immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
ar.setDatePublished(DateTime())
return [ar]
def __call__(self):
workflow = getToolByName(self.context, 'portal_workflow')
# SMTP errors are silently ignored if server is in debug mode
self.debug_mode = App.config.getConfiguration().debug_mode
# PDF and HTML files are written to disk if server is in debug mode
self.out_path = join(Globals.INSTANCE_HOME, 'var') if self.debug_mode \
else None
self._get_user_attributes()
self._get_lab_attributes()
# This for loop prints each AR individually to a PDF stored in the AR,
# and sends whatever publication is required
for ar_nr, ar in enumerate(self.analysis_requests):
self.any_drymatter = ar.getReportDryMatter()
self._get_ar_attributes(ar)
self._get_client_attribues(ar)
self._get_batch_attributes(ar)
self._get_sample_attributes(ar)
self._get_contact_attributes(ar)
self._get_categorized_services(ar)
self._get_categorized_qcservices(ar)
self.Footer = to_utf8(self.context.bika_setup.getResultFooter())
out_fn = to_utf8(ar.Title())
# Create the html report
ar_results = safe_unicode(self.template()).encode('utf-8')
if self.out_path:
open(join(self.out_path, out_fn + ".html"), "w").write(ar_results)
# Create the pdf report (will always be attached to the AR)
pdf_outfile = join(self.out_path,
out_fn + ".pdf") if self.out_path else None
pdf_css = resource_filename(
"bika.lims", "skins/bika/analysisrequest_results_pdf.css")
ar_css = join(self.portal_url, "analysisrequest_results.css")
ar_results = ar_results.replace(ar_css, pdf_css)
pdf_report = createPdf(ar_results, pdf_outfile, css=pdf_css)
if self.contact['obj']:
recipients = [{
'UID': self.contact['obj'].UID(),
'Username': to_utf8(self.contact['obj'].getUsername()),
'Fullname': to_utf8(self.contact['obj'].getFullname()),
'EmailAddress': to_utf8(self.contact['obj'].getEmailAddress()),
'PublicationModes': self.contact['obj'].getPublicationPreference()
}]
else:
recipients = []
if pdf_report:
reportid = self.context.generateUniqueId('ARReport')
report = _createObjectByType("ARReport", ar, reportid)
report.edit(
AnalysisRequest=ar.UID(),
Pdf=pdf_report,
Html=ar_results,
Recipients=recipients
)
report.unmarkCreationFlag()
from bika.lims.idserver import renameAfterCreation
renameAfterCreation(report)
# Set status to published
if self.action == 'publish':
try:
workflow.doActionFor(ar, 'publish')
except WorkflowException:
pass
# compose and send email.
# The managers of the departments for which the current AR has
# at least one AS must receive always the pdf report by email.
# https://github.com/bikalabs/Bika-LIMS/issues/1028
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(self.laboratory['obj'].getName()),
self.laboratory['obj'].getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(ar_results, _subtype='html')
mime_msg.attach(msg_txt)
to = []
mngrs = ar.getResponsible()
for mngrid in mngrs['ids']:
name = mngrs['dict'][mngrid].get('name', '')
email = mngrs['dict'][mngrid].get('email', '')
if (email != ''):
to.append(formataddr((encode_header(name), email)))
if len(to) > 0:
# Send the email to the managers
mime_msg['To'] = ','.join(to)
attachPdf(mime_msg, pdf_report, out_fn)
try:
host = getToolByName(self.context, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except SMTPServerDisconnected as msg:
pass
if not self.debug_mode:
raise SMTPServerDisconnected(msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
to = []
# Send report to recipients
recips = self.get_recipients(ar)
for recip in recips:
if 'email' not in recip.get('pubpref', []) \
or not recip.get('email', ''):
continue
title = encode_header(recip.get('title', ''))
email = recip.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object, cause the previous one
# has the pdf already attached
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(self.laboratory['obj'].getName()),
self.laboratory['obj'].getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(ar_results, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report and 'pdf' in recip.get('pubpref'):
attachPdf(mime_msg, pdf_report, out_fn)
# For now, I will simply ignore mail send under test.
if hasattr(self.portal, 'robotframework'):
continue
try:
host = getToolByName(self.context, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except SMTPServerDisconnected as msg:
if not self.debug_mode:
raise SMTPServerDisconnected(msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
return [ar.RequestID for ar in self.analysis_requests]
def notify_rejection(analysisrequest):
"""
Notifies via email that a given Analysis Request has been rejected. The
notification is sent to the Client contacts assigned to the Analysis
Request.
:param analysisrequest: Analysis Request to which the notification refers
:returns: true if success
"""
arid = analysisrequest.getRequestID()
# This is the template to render for the pdf that will be either attached
# to the email and attached the the Analysis Request for further access
from bika.lims.browser.analysisrequest.reject import AnalysisRequestRejectPdfView
tpl = AnalysisRequestRejectPdfView(analysisrequest, analysisrequest.REQUEST)
html = tpl.template()
html = safe_unicode(html).encode('utf-8')
filename = '%s-rejected' % arid
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf = createPdf(htmlreport=html, outfile=pdf_fn)
if pdf:
# Attach the pdf to the Analysis Request
attid = analysisrequest.aq_parent.generateUniqueId('Attachment')
att = _createObjectByType("Attachment", analysisrequest.aq_parent, tmpID())
att.setAttachmentFile(open(pdf_fn))
# Awkward workaround to rename the file
attf = att.getAttachmentFile()
attf.filename = '%s.pdf' % filename
att.setAttachmentFile(attf)
att.unmarkCreationFlag()
renameAfterCreation(att)
atts = analysisrequest.getAttachment() + [att] if \
analysisrequest.getAttachment() else [att]
atts = [a.UID() for a in atts]
analysisrequest.setAttachment(atts)
os.remove(pdf_fn)
# This is the message for the email's body
from bika.lims.browser.analysisrequest.reject import AnalysisRequestRejectEmailView
tpl = AnalysisRequestRejectEmailView(analysisrequest, analysisrequest.REQUEST)
html = tpl.template()
html = safe_unicode(html).encode('utf-8')
# compose and send email.
mailto = []
lab = analysisrequest.bika_setup.laboratory
mailfrom = formataddr((encode_header(lab.getName()), lab.getEmailAddress()))
mailsubject = _('%s has been rejected') % arid
contacts = [analysisrequest.getContact()] + analysisrequest.getCCContact()
for contact in contacts:
name = to_utf8(contact.getFullname())
email = to_utf8(contact.getEmailAddress())
if email:
mailto.append(formataddr((encode_header(name), email)))
if not mailto:
return False
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = mailsubject
mime_msg['From'] = mailfrom
mime_msg['To'] = ','.join(mailto)
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(html, _subtype='html')
mime_msg.attach(msg_txt)
if pdf:
attachPdf(mime_msg, pdf, filename)
try:
host = getToolByName(analysisrequest, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except:
pass
return True
def publishFromHTML(self, prouid, results_html):
uc = getToolByName(self.context, 'uid_catalog')
pros = uc(UID=prouid)
if not pros or len(pros) != 1:
return []
pro = pros[0].getObject();
# HTML written to debug file
debug_mode = App.config.getConfiguration().debug_mode
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".html")
logger.debug("Writing HTML for %s to %s" % (pro.Title(), tmp_fn))
open(tmp_fn, "wb").write(results_html)
# Create the pdf report (will always be attached to the Order)
# we must supply the file ourself so that createPdf leaves it alone.
# This version replaces 'attachment' links; probably not required,
# so it's repeated below, without these localise_images.
# cleanup, results_html_for_pdf = self.localise_images(results_html)
# pdf_fn = tempfile.mktemp(suffix=".pdf")
# pdf_report = createPdf(htmlreport=results_html_for_pdf, outfile=pdf_fn)
# for fn in cleanup:
# os.remove(fn)
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf_report = createPdf(htmlreport=results_html, outfile=pdf_fn)
# PDF written to debug file
if debug_mode:
logger.debug("Writing PDF for %s to %s" % (pro.Title(), pdf_fn))
else:
os.remove(pdf_fn)
recipients = []
# Send report to supplier
supplier_data = self._supplier_data(pro)
title = encode_header(supplier_data.get('title', ''))
email = supplier_data.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(pro)
"""
Edit this to change the From address
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
"""
mime_msg['From'] = formataddr(("BIKA IMM", "*****@*****.**"))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report:
attachPdf(mime_msg, pdf_report, pdf_fn)
msg_string = mime_msg.as_string()
# content of outgoing email written to debug file
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".email")
logger.debug("Writing MIME message for %s to %s" % (pro.Title(), tmp_fn))
open(tmp_fn, "wb").write(msg_string)
try:
host = getToolByName(pro, 'MailHost')
host.send(msg_string, immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
pro.setDateDispatched(DateTime())
return [pro]
def publishFromHTML(self, aruid, results_html):
# The AR can be published only and only if allowed
uc = getToolByName(self.context, 'uid_catalog')
ars = uc(UID=aruid)
if not ars or len(ars) != 1:
return []
ar = ars[0].getObject()
wf = getToolByName(ar, 'portal_workflow')
allowed_states = ['verified', 'published']
# Publish/Republish allowed?
if wf.getInfoFor(ar, 'review_state') not in allowed_states:
# Pre-publish allowed?
if not ar.getAnalyses(review_state=allowed_states):
return []
# HTML written to debug file
debug_mode = App.config.getConfiguration().debug_mode
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".html")
logger.debug("Writing HTML for %s to %s" % (ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(results_html)
# Create the pdf report (will always be attached to the AR)
# we must supply the file ourself so that createPdf leaves it alone.
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf_report = createPdf(htmlreport=results_html, outfile=pdf_fn)
# PDF written to debug file
if debug_mode:
logger.debug("Writing PDF for %s to %s" % (ar.Title(), pdf_fn))
else:
os.remove(pdf_fn)
recipients = []
contact = ar.getContact()
lab = ar.bika_setup.laboratory
if pdf_report:
if contact:
recipients = [{
'UID':
contact.UID(),
'Username':
to_utf8(contact.getUsername()),
'Fullname':
to_utf8(contact.getFullname()),
'EmailAddress':
to_utf8(contact.getEmailAddress()),
'PublicationModes':
contact.getPublicationPreference()
}]
reportid = ar.generateUniqueId('ARReport')
report = _createObjectByType("ARReport", ar, reportid)
report.edit(AnalysisRequest=ar.UID(),
Pdf=pdf_report,
Html=results_html,
Recipients=recipients)
report.unmarkCreationFlag()
renameAfterCreation(report)
# Set status to prepublished/published/republished
status = wf.getInfoFor(ar, 'review_state')
transitions = {'verified': 'publish', 'published': 'republish'}
transition = transitions.get(status, 'prepublish')
try:
wf.doActionFor(ar, transition)
except WorkflowException:
pass
# compose and send email.
# The managers of the departments for which the current AR has
# at least one AS must receive always the pdf report by email.
# https://github.com/bikalabs/Bika-LIMS/issues/1028
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
to = []
mngrs = ar.getResponsible()
for mngrid in mngrs['ids']:
name = mngrs['dict'][mngrid].get('name', '')
email = mngrs['dict'][mngrid].get('email', '')
if (email != ''):
to.append(formataddr((encode_header(name), email)))
if len(to) > 0:
# Send the email to the managers
mime_msg['To'] = ','.join(to)
attachPdf(mime_msg, pdf_report, pdf_fn)
try:
host = getToolByName(ar, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
# Send report to recipients
recips = self.get_recipients(ar)
for recip in recips:
if 'email' not in recip.get('pubpref', []) \
or not recip.get('email', ''):
continue
title = encode_header(recip.get('title', ''))
email = recip.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object, cause the previous one
# has the pdf already attached
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report and 'pdf' in recip.get('pubpref'):
attachPdf(mime_msg, pdf_report, pdf_fn)
# For now, I will simply ignore mail send under test.
if hasattr(self.portal, 'robotframework'):
continue
msg_string = mime_msg.as_string()
# content of outgoing email written to debug file
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".email")
logger.debug("Writing MIME message for %s to %s" %
(ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(msg_string)
try:
host = getToolByName(ar, 'MailHost')
host.send(msg_string, immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
ar.setDatePublished(DateTime())
return [ar]
def notify_rejection(analysisrequest):
"""
Notifies via email that a given Analysis Request has been rejected. The
notification is sent to the Client contacts assigned to the Analysis
Request.
:param analysisrequest: Analysis Request to which the notification refers
:returns: true if success
"""
# We do this imports here to avoid circular dependencies until we deal
# better with this notify_rejection thing.
from bika.lims.browser.analysisrequest.reject import \
AnalysisRequestRejectPdfView, AnalysisRequestRejectEmailView
arid = analysisrequest.getId()
# This is the template to render for the pdf that will be either attached
# to the email and attached the the Analysis Request for further access
tpl = AnalysisRequestRejectPdfView(analysisrequest,
analysisrequest.REQUEST)
html = tpl.template()
html = safe_unicode(html).encode('utf-8')
filename = '%s-rejected' % arid
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf = createPdf(htmlreport=html, outfile=pdf_fn)
if pdf:
# Attach the pdf to the Analysis Request
attid = analysisrequest.aq_parent.generateUniqueId('Attachment')
att = _createObjectByType("Attachment", analysisrequest.aq_parent,
attid)
att.setAttachmentFile(open(pdf_fn))
# Awkward workaround to rename the file
attf = att.getAttachmentFile()
attf.filename = '%s.pdf' % filename
att.setAttachmentFile(attf)
att.unmarkCreationFlag()
renameAfterCreation(att)
analysisrequest.addAttachment(att)
os.remove(pdf_fn)
# This is the message for the email's body
tpl = AnalysisRequestRejectEmailView(analysisrequest,
analysisrequest.REQUEST)
html = tpl.template()
html = safe_unicode(html).encode('utf-8')
# compose and send email.
mailto = []
lab = analysisrequest.bika_setup.laboratory
mailfrom = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mailsubject = _('%s has been rejected') % arid
contacts = [analysisrequest.getContact()] + analysisrequest.getCCContact()
for contact in contacts:
name = to_utf8(contact.getFullname())
email = to_utf8(contact.getEmailAddress())
if email:
mailto.append(formataddr((encode_header(name), email)))
if not mailto:
return False
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = mailsubject
mime_msg['From'] = mailfrom
mime_msg['To'] = ','.join(mailto)
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(html, _subtype='html')
mime_msg.attach(msg_txt)
if pdf:
attachPdf(mime_msg, pdf, filename)
try:
host = getToolByName(analysisrequest, 'MailHost')
host.send(mime_msg.as_string(), immediate=True)
except:
logger.warning(
"Email with subject %s was not sent (SMTP connection error)" %
mailsubject)
return True
def publishFromHTML(self, prouid, results_html):
uc = getToolByName(self.context, 'uid_catalog')
pros = uc(UID=prouid)
if not pros or len(pros) != 1:
return []
pro = pros[0].getObject()
# HTML written to debug file
debug_mode = App.config.getConfiguration().debug_mode
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".html")
logger.debug("Writing HTML for %s to %s" % (pro.Title(), tmp_fn))
open(tmp_fn, "wb").write(results_html)
# Create the pdf report (will always be attached to the Order)
# we must supply the file ourself so that createPdf leaves it alone.
# This version replaces 'attachment' links; probably not required,
# so it's repeated below, without these localise_images.
# cleanup, results_html_for_pdf = self.localise_images(results_html)
# pdf_fn = tempfile.mktemp(suffix=".pdf")
# pdf_report = createPdf(htmlreport=results_html_for_pdf, outfile=pdf_fn)
# for fn in cleanup:
# os.remove(fn)
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf_report = createPdf(htmlreport=results_html, outfile=pdf_fn)
# PDF written to debug file
if debug_mode:
logger.debug("Writing PDF for %s to %s" % (pro.Title(), pdf_fn))
else:
os.remove(pdf_fn)
recipients = []
# Send report to supplier
supplier_data = self._supplier_data(pro)
title = encode_header(supplier_data.get('title', ''))
email = supplier_data.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(pro)
"""
Edit this to change the From address
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
"""
mime_msg['From'] = formataddr(("BIKA IMM", "*****@*****.**"))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report:
attachPdf(mime_msg, pdf_report, pdf_fn)
msg_string = mime_msg.as_string()
# content of outgoing email written to debug file
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".email")
logger.debug("Writing MIME message for %s to %s" %
(pro.Title(), tmp_fn))
open(tmp_fn, "wb").write(msg_string)
try:
host = getToolByName(pro, 'MailHost')
host.send(msg_string, immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
pro.setDateDispatched(DateTime())
return [pro]
def publishFromHTML(self, aruid, results_html):
# The AR can be published only and only if allowed
uc = getToolByName(self.context, 'uid_catalog')
#ars = uc(UID=aruid)
ars = [p.getObject() for p in uc(UID=aruid)]
if not ars or len(ars) != 1:
return []
ar = ars[0]
wf = getToolByName(ar, 'portal_workflow')
allowed_states = ['verified', 'published']
# Publish/Republish allowed?
if wf.getInfoFor(ar, 'review_state') not in allowed_states:
# Pre-publish allowed?
if not ar.getAnalyses(review_state=allowed_states):
return []
# HTML written to debug file
debug_mode = App.config.getConfiguration().debug_mode
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".html")
logger.debug("Writing HTML for %s to %s" % (ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(results_html)
# Create the pdf report (will always be attached to the AR)
# we must supply the file ourself so that createPdf leaves it alone.
pdf_fn = tempfile.mktemp(suffix=".pdf")
pdf_report = createPdf(htmlreport=results_html, outfile=pdf_fn)
# PDF written to debug file
if debug_mode:
logger.debug("Writing PDF for %s to %s" % (ar.Title(), pdf_fn))
else:
os.remove(pdf_fn)
recipients = []
contact = ar.getContact()
lab = ar.bika_setup.laboratory
# BIKA Cannabis hack. Create the CSV they desire here now
#csvdata = self.create_cannabis_csv(ars)
csvdata = self.create_metrc_csv(ars)
pdf_fn = to_utf8(ar.getRequestID())
if pdf_report:
if contact:
recipients = [{
'UID':
contact.UID(),
'Username':
to_utf8(contact.getUsername()),
'Fullname':
to_utf8(contact.getFullname()),
'EmailAddress':
to_utf8(contact.getEmailAddress()),
'PublicationModes':
contact.getPublicationPreference()
}]
reportid = ar.generateUniqueId('ARReport')
report = _createObjectByType("ARReport", ar, reportid)
report.edit(AnalysisRequest=ar.UID(),
Pdf=pdf_report,
CSV=csvdata,
Html=results_html,
Recipients=recipients)
report.unmarkCreationFlag()
renameAfterCreation(report)
# Set blob properties for fields containing file data
fld = report.getField('Pdf')
fld.get(report).setFilename(pdf_fn + ".pdf")
fld.get(report).setContentType('application/pdf')
fld = report.getField('CSV')
fld.get(report).setFilename(pdf_fn + ".csv")
fld.get(report).setContentType('text/csv')
# Set status to prepublished/published/republished
status = wf.getInfoFor(ar, 'review_state')
transitions = {'verified': 'publish', 'published': 'republish'}
transition = transitions.get(status, 'prepublish')
try:
wf.doActionFor(ar, transition)
except WorkflowException:
pass
# compose and send email.
# The managers of the departments for which the current AR has
# at least one AS must receive always the pdf report by email.
# https://github.com/bikalabs/Bika-LIMS/issues/1028
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
to = []
#mngrs = ar.getResponsible()
#for mngrid in mngrs['ids']:
# name = mngrs['dict'][mngrid].get('name', '')
# email = mngrs['dict'][mngrid].get('email', '')
# if (email != ''):
# to.append(formataddr((encode_header(name), email)))
#if len(to) > 0:
# # Send the email to the managers
# mime_msg['To'] = ','.join(to)
# attachPdf(mime_msg, pdf_report, pdf_fn)
# # BIKA Cannabis hack. Create the CSV they desire here now
# fn = pdf_fn
# attachCSV(mime_msg,csvdata,fn)
# try:
# host = getToolByName(ar, 'MailHost')
# host.send(mime_msg.as_string(), immediate=True)
# except SMTPServerDisconnected as msg:
# logger.warn("SMTPServerDisconnected: %s." % msg)
# except SMTPRecipientsRefused as msg:
# raise WorkflowException(str(msg))
# Send report to recipients
recips = self.get_recipients(ar)
for recip in recips:
if 'email' not in recip.get('pubpref', []) \
or not recip.get('email', ''):
continue
title = encode_header(recip.get('title', ''))
email = recip.get('email')
formatted = formataddr((title, email))
# Create the new mime_msg object, cause the previous one
# has the pdf already attached
mime_msg = MIMEMultipart('related')
mime_msg['Subject'] = self.get_mail_subject(ar)[0]
mime_msg['From'] = formataddr(
(encode_header(lab.getName()), lab.getEmailAddress()))
mime_msg.preamble = 'This is a multi-part MIME message.'
msg_txt = MIMEText(results_html, _subtype='html')
mime_msg.attach(msg_txt)
mime_msg['To'] = formatted
# Attach the pdf to the email if requested
if pdf_report and 'pdf' in recip.get('pubpref'):
attachPdf(mime_msg, pdf_report, pdf_fn)
# BIKA Cannabis hack. Create the CSV they desire here now
fn = pdf_fn
attachCSV(mime_msg, csvdata, fn)
# For now, I will simply ignore mail send under test.
if hasattr(self.portal, 'robotframework'):
continue
msg_string = mime_msg.as_string()
# content of outgoing email written to debug file
if debug_mode:
tmp_fn = tempfile.mktemp(suffix=".email")
logger.debug("Writing MIME message for %s to %s" %
(ar.Title(), tmp_fn))
open(tmp_fn, "wb").write(msg_string)
try:
host = getToolByName(ar, 'MailHost')
host.send(msg_string, immediate=True)
except SMTPServerDisconnected as msg:
logger.warn("SMTPServerDisconnected: %s." % msg)
except SMTPRecipientsRefused as msg:
raise WorkflowException(str(msg))
# Save file on the filesystem
folder = os.environ.get('COAs_FOLDER', '')
if len(folder) != 0:
client_path = '{}/{}/'.format(folder, ar.getClientID())
if not os.path.exists(client_path):
os.makedirs(client_path)
today = self.ulocalized_time(DateTime(), long_format=0)
today_path = '{}{}/'.format(client_path, today)
if not os.path.exists(today_path):
os.makedirs(today_path)
fname = '{}{}.pdf'.format(today_path, pdf_fn)
f = open(fname, 'w')
f.write(pdf_report)
f.close()
csvname = '{}{}.csv'.format(today_path, pdf_fn)
fcsv = open(csvname, 'w')
fcsv.write(csvdata)
fcsv.close()
return [ar]
