Python add_synapse_modelの例

コード例 #1

ファイル: synapses.py プロジェクト: latimerb/FR_distribution

def load():
    add_synapse_model(Bg2Pyr, 'bg2pyr', overwrite=False)
    add_synapse_model(Bg2Pyr, overwrite=False)
    add_synapse_model(Pyr2Pyr, 'pyr2pyr', overwrite=False)
    add_synapse_model(Pyr2Pyr, overwrite=False)
    add_synapse_model(Pyr2Int, 'pyr2int', overwrite=False)
    add_synapse_model(Pyr2Int, overwrite=False)
    add_synapse_model(Int2Pyr, 'int2pyr', overwrite=False)
    add_synapse_model(Int2Pyr, overwrite=False)
    return

コード例 #2

ファイル: synapses.py プロジェクト: latimerb/LUT_code

def load():
    add_synapse_model(Exp2Syn1_STSP, 'exp2syn1_stsp', overwrite=False)
    add_synapse_model(Exp2Syn1_STSP, overwrite=False)
    return

コード例 #3

def load():
    add_synapse_model(InhSyn, 'inhsyn', overwrite=False)
    add_synapse_model(InhSyn, overwrite=False)
    return

コード例 #4

ファイル: synapses.py プロジェクト: latimerb/L5NeuronSimulation

def load():
    #import pdb; pdb.set_trace()
    add_synapse_model(Bg2Pyr, 'bg2pyr', overwrite=False)
    add_synapse_model(Bg2Pyr, overwrite=False)
    add_synapse_model(Pyr2Pyr, 'pyr2pyr', overwrite=False)
    add_synapse_model(Pyr2Pyr, overwrite=False)
    add_synapse_model(Pyr2Int, 'pyr2int', overwrite=False)
    add_synapse_model(Pyr2Int, overwrite=False)
    add_synapse_model(Int2Pyr, 'int2pyr', overwrite=False)
    #import pdb; pdb.set_trace()
    add_synapse_model(Int2Pyr, overwrite=False)
    #import pdb; pdb.set_trace()
    return

コード例 #5

ファイル: synapses.py プロジェクト: tjbanks/AmygdalaTheta

def load():
    add_synapse_model(Bg2Pyr, 'bg2pyr', overwrite=False)
    add_synapse_model(Bg2Pyr, overwrite=False)
    add_synapse_model(bginh, 'bginh', overwrite=False)
    add_synapse_model(bginh, overwrite=False)
    add_synapse_model(interD2interD_STFD, 'interD2interD_STFD', overwrite=False)
    add_synapse_model(interD2interD_STFD, overwrite=False)
    add_synapse_model(interD2pyrD_STFD, 'interD2pyrD_STFD', overwrite=False)
    add_synapse_model(interD2pyrD_STFD, overwrite=False)
    add_synapse_model(pyrD2interD_STFD, 'pyrD2interD_STFD', overwrite=False)
    add_synapse_model(pyrD2interD_STFD, overwrite=False)
    add_synapse_model(pyrD2pyrD_STFD, 'pyrD2pyrD_STFD', overwrite=False)
    add_synapse_model(pyrD2pyrD_STFD, overwrite=False)

    #SOM
    add_synapse_model(pyrD2interD_P2SOM_STFD, 'pyrD2interD_P2SOM_STFD', overwrite=False)
    add_synapse_model(pyrD2interD_P2SOM_STFD, overwrite=False)
    add_synapse_model(interD2pyrD_SOM2P_STFD, 'interD2pyrD_SOM2P_STFD', overwrite=False)
    add_synapse_model(interD2pyrD_SOM2P_STFD, overwrite=False)
    add_synapse_model(interD2interD_SOMPV_STFD, 'interD2interD_SOMPV_STFD', overwrite=False)
    add_synapse_model(interD2interD_SOMPV_STFD, overwrite=False)

    #CR
    add_synapse_model(pyrD2interD_P2CR_STFD, 'pyrD2interD_P2CR_STFD', overwrite=False)
    add_synapse_model(pyrD2interD_P2CR_STFD, overwrite=False)
    add_synapse_model(interD2pyrD_CR2P_STFD, 'interD2pyrD_CR2P_STFD', overwrite=False)
    add_synapse_model(interD2pyrD_CR2P_STFD, overwrite=False)


    return

コード例 #6

ファイル: synapse_models.py プロジェクト: johnsonc/bmtk

    :param secs: target sections
    :return: list of NEURON synpase objects
    """
    syns = []

    for x, sec in zip(xs, secs):
        syn = h.Exp2Syn(x, sec=sec)
        syn.e = syn_params['erev']
        syn.tau1 = syn_params['tau1']
        syn.tau2 = syn_params['tau2']
        syns.append(syn)
    return syns


def Exp2Syn(syn_params, sec_x, sec_id):
    """Create a list of exp2syn synapses

    :param syn_params: parameters of a synapse
    :param sec_x: normalized distance along the section
    :param sec_id: target section
    :return: NEURON synapse object
    """
    syn = h.Exp2Syn(sec_x, sec=sec_id)
    syn.e = syn_params['erev']
    syn.tau1 = syn_params['tau1']
    syn.tau2 = syn_params['tau2']
    return syn


add_synapse_model(exp2syn, overwrite=False)
add_synapse_model(Exp2Syn, overwrite=False)

コード例 #7

def load():
    add_synapse_model(bg2PN, 'bg2pn', overwrite=False)
    add_synapse_model(bg2PN, overwrite=False)

    add_synapse_model(Tone2Pyr, 'tone2pyr', overwrite=False)
    add_synapse_model(Tone2Pyr, overwrite=False)

    add_synapse_model(Shock2Pyr, 'shock2pyr', overwrite=False)
    add_synapse_model(Shock2Pyr, overwrite=False)

    add_synapse_model(Shock2Int, 'shock2int', overwrite=False)
    add_synapse_model(Shock2Int, overwrite=False)

    add_synapse_model(pyr2pyr, 'pyr2pyr', overwrite=False)
    add_synapse_model(pyr2pyr, overwrite=False)

    add_synapse_model(pyr2int, 'pyr2int', overwrite=False)
    add_synapse_model(pyr2int, overwrite=False)

    add_synapse_model(int2int, 'int2int', overwrite=False)
    add_synapse_model(int2int, overwrite=False)

    add_synapse_model(int2pyr, 'int2pyr', overwrite=False)
    add_synapse_model(int2pyr, overwrite=False)
    return

コード例 #8

ファイル: synapses.py プロジェクト: nopsal/PlasticityToy

def load():
    add_synapse_model(Tone2Pyr, 'tone2pyr', overwrite=False)
    add_synapse_model(Tone2Pyr, overwrite=False)
    add_synapse_model(Shock2Pyr, 'shock2pyr', overwrite=False)
    add_synapse_model(Shock2Pyr, overwrite=False)
    return