def setUp(self):
cdltext = r"""netcdf charvars {
dimensions:
nreg = 3 ;
namelen = 10 ;
rec = 2 ;
code = 3 ;
codelen = 4 ;
variables:
char letter ;
int regcodes(nreg) ;
regcodes:long_name = "region codes" ;
char regions(nreg, namelen) ;
regions:long_name = "region names" ;
char digits(namelen) ;
digits:long_name = "decimal digits" ;
int sampleid(rec) ;
sampleid:long_name = "sample id" ;
char dna_code(rec, code, codelen) ;
dna_code:long_name = "DNA code" ;
// global attributes
:comment = "a cast of unholy characters" ;
data:
regcodes = 1, 2, 3 ;
regions = "Europe", "Americas", "Asia" ;
digits = "0123456789" ;
letter = "X" ;
sampleid = 1, 2 ;
dna_code = "ACTG", "ACGG", "ATGC", "CTGA", "GCTA", "TGCA";
}"""
parser = cdlparser.CDL3Parser()
self.tmpfile = tempfile.mkstemp(suffix='.nc')[1]
self.dataset = parser.parse_text(cdltext, ncfile=self.tmpfile)
def setUp(self):
cdltext = r"""netcdf fillvalues {
dimensions:
lat = 2 ;
lon = 2 ;
time = unlimited ;
variables:
int time(time) ;
time:units = "days since 1970-01-01" ;
float lat(lat) ;
lat:standard_name = "latitude" ;
float lon(lon) ;
lon:standard_name = "longitude" ;
float tas(time, lat, lon) ;
tas:standard_name = "air_temperature" ;
tas:_FillValue = -1.0e30f ;
// global attributes
:comment = "fill value tests" ;
data:
time = 0, 30, 60 ;
lat = 0.0f, 10.0f ;
lon = 0.0f, 20.0f ;
// final 2 values are missing from tas data array and thus
// should be automatically assigned as fill values
tas = _, _, 3.0f, 4.0f, 5.0f, 6.0f, 7.0f, 8.0f, 9.0f, 10.0f ;
}"""
parser = cdlparser.CDL3Parser()
self.tmpfile = tempfile.mkstemp(suffix='.nc')[1]
self.dataset = parser.parse_text(cdltext, ncfile=self.tmpfile)
def setUp(self) :
cdltext = r"""netcdf constants {
dimensions:
dim1 = 3 ;
variables:
float var1(dim1) ;
var1:att1 = "dummy attribute" ;
// FillValue necessary to enable masking in NETCDF3_CLASSIC right now.
// See https://github.com/Unidata/netcdf4-python/issues/725.
var1:_FillValue = 9.9692099683868690e+36;
// global attributes
:c1 = "foo" ; // with spaces
:c2="bar" ; // w/o spaces
:byte1 = 123b ;
:byte2 = 'a' ; // 97
:byte3 = '\n' ; // 10
:short1 = 1234s ;
:short2 = -888s ;
:short3 = 0xFFs ; // 255
:short4 = 077s ; // 63
:int1 = -56789 ;
:int2 = 123456 ;
:int3 = 0666 ; // 438
:int4 = 0x2F ; // 47
:iarray = 1, 2, 3, 4 ;
:float1 = 123.0f ;
:float2 = 0.2718e1f ;
:farray = 1.0f, 2.0f, 3.0f ;
:double1 = 3.14159d ;
:double2 = 0.010203 ;
:darray = 1.0, 2.0, 3.0 ;
data:
var1 = 1.0f, 2.0f, _ ;
}"""
parser = cdlparser.CDL3Parser()
self.tmpfile = tempfile.mkstemp(suffix='.nc')[1]
self.dataset = parser.parse_text(cdltext, ncfile=self.tmpfile)
def setUp(self):
cdltext = r"""netcdf constants {
dimensions:
dim1 = 3 ;
variables:
float var1(dim1) ;
var1:att1 = "dummy attribute" ;
// global attributes
:c1 = "foo" ; // with spaces
:c2="bar" ; // w/o spaces
:byte1 = 123b ;
:byte2 = 'a' ; // 97
:byte3 = '\n' ; // 10
:short1 = 1234s ;
:short2 = -888s ;
:short3 = 0xFFs ; // 255
:short4 = 077s ; // 63
:int1 = -56789 ;
:int2 = 123456 ;
:int3 = 0666 ; // 438
:int4 = 0x2F ; // 47
:iarray = 1, 2, 3, 4 ;
:float1 = 123.0f ;
:float2 = 0.2718e1f ;
:farray = 1.0f, 2.0f, 3.0f ;
:double1 = 3.14159d ;
:double2 = 0.010203 ;
:darray = 1.0, 2.0, 3.0 ;
data:
var1 = 1.0f, 2.0f, _ ;
}"""
parser = cdlparser.CDL3Parser()
self.tmpfile = tempfile.mkstemp(suffix='.nc')[1]
self.dataset = parser.parse_text(cdltext, ncfile=self.tmpfile)
def setUp(self):
cdltext = r"""netcdf basics {
dimensions:
lev = 1 ;
lat = 2 ;
lon = 3 ;
time = unlimited ;
variables:
int tas(lev, lat, lon) ;
tas:standard_name = "air_temperature" ;
tas:units = "K" ;
tas:radius = 6371000.0 ;
double height(lev) ;
height:standard_name = "height" ;
// global attributes
:Conventions = "CF-1.5" ;
:comment = "cdlparser rocks!" ;
data:
tas = 0, 1, 2, 3, 4, 5 ;
height = 10.0 ;
}"""
parser = cdlparser.CDL3Parser()
self.tmpfile = tempfile.mkstemp(suffix='.nc')[1]
self.dataset = parser.parse_text(cdltext, ncfile=self.tmpfile)