コード例 #1
0
    def load(self, cdr_id):
        """
        Check out the CDR Term document, parse it, and update it with
        the current concept information.

        Pass:
            cdr_id - unique identified of the existing CDR Term document

        Return:
            cdr.Doc object with updated terms and/or definitions
        """

        try:
            self.cdr_id, self.doc_id, frag_id = cdr.exNormalize(cdr_id)
            if cdr.lastVersions(self.session, self.cdr_id)[1] != -1:
                self.published = True
        except:
            Concept.fail("invalid CDR ID %r" % cdr_id)
        self.concept.logger.info("updating %s", self.cdr_id)
        try:
            doc = cdr.getDoc(self.session, self.cdr_id, "Y", getObject=True)
        except Exception as e:
            Concept.fail("failure retrieving %s: %s" % (self.cdr_id, e))
        try:
            self.root = self.parse(doc.xml)
            doc.xml = self.update()
            return doc
        except Exception:
            cdr.unlock(self.session, self.cdr_id)
            raise
コード例 #2
0
    def idpair(self):
        """CDR Media document ID pair - returning a list [EN, ES]."""

        # Find Spanish document when using the English version
        if not hasattr(self, "_idpair"):
            cdrId = self.fields.getvalue("DocId")
            _id = exNormalize(cdrId)[1]

            query = self.Query("query_term", "doc_id", "int_val")
            query.where(query.Condition("path", self.TRANSLATION_OF))
            query.where(query.Condition("int_val", _id))
            rows = query.execute(self.cursor).fetchall()

            # Find English document when using the Spanish version
            if not rows:
                queryES = self.Query("query_term", "doc_id", "int_val")
                queryES.where(query.Condition("path", self.TRANSLATION_OF))
                queryES.where(query.Condition("doc_id", _id))
                rowsES = queryES.execute(self.cursor).fetchall()

                if not rowsES:
                    self.bail("No Spanish translation found for image document")

                self._idpair =  [rowsES[0][1], rowsES[0][0]] or None
                return self._idpair

            self._idpair =  [rows[0][1], rows[0][0]] or None
        return self._idpair
コード例 #3
0
ファイル: MediaInSummary.py プロジェクト: NCIOCPL/cdr-admin
 def get_int_cdr_id(self, value):
     """
     Convert CDR ID to integer. Exit with an error message on failure.
     """
     if value:
         try:
             return exNormalize(value)[1]
         except:
             self.bail("Invalid format for CDR ID")
     return None
コード例 #4
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 def __parseBoardMembershipDetails(self, node):
     boardId = None
     frequency = None
     for child in node.childNodes:
         if child.nodeName == "BoardName":
             attr = child.getAttribute("cdr:ref")
             if attr:
                 id = cdr.exNormalize(attr)
                 boardId = id[1]
                 if boardId != self.board.id:
                     return
         elif child.nodeName == "TermRenewalFrequency":
             frequency = cdr.getTextContent(child)
     if boardId and frequency:
         self.renewalFrequency = frequency
コード例 #5
0
ファイル: PushDevData.py プロジェクト: NCIOCPL/cdr-tools
 def _find_locker(self, id):
     """
     Find out who (if anyone) has a specified document checked out.
     """
     self._cursor.execute(
         """\
         SELECT u.name
           FROM usr u
           JOIN checkout c
             ON c.usr = u.id
          WHERE c.id = ?
            AND c.dt_in IS NULL
       ORDER BY dt_out DESC""",
         cdr.exNormalize(id)[1])
     rows = self._cursor.fetchall()
     return rows and rows[0][0] or None
コード例 #6
0
ファイル: GetCdrImage.py プロジェクト: NCIOCPL/cdr-admin
            return None
        return int(round(width * (120.0 / height)))
    else:
        cdrcgi.bail("invalid res value '%s'" % res)

# If the docId comes in in the format 'CDR99999-111.jpg' it is coming
# from the PublishPreview with a size postfix.
# We capture the size instructions.
# --------------------------------------------------------------------
cdrId = cdrId.split('.')[0]
if cdrId.find('-') > 0:
    docId, width = cdrId.split('-')
else:
    docId = cdrId

intId   = cdr.exNormalize(docId)[1]

# If the docId comes in the format 'CDR000999999' it is coming
# from the QC report. If it's coming in the format 'CDR999999' it is
# coming from the PublishPreview report.  We're selecting the
# last publishable version for the PP report.
# ------------------------------------------------------------------
ppQuery = ""
if pp == 'Y':
    ppQuery = "AND publishable = 'Y'"
elif pp == 'N':
    ppQuery = ""
elif cdrId.find('CDR0') < 0:
    ppQuery= "AND publishable = 'Y'"

query = """\
コード例 #7
0
    def __parseBoardDoc(self, id):

        today = str(self.today)
        docId = "CDR%d" % id
        versions = cdr.lastVersions('guest', docId)
        ver = str(versions[0])
        doc = cdr.getDoc('guest', docId, version=ver, getObject=True)
        errors = cdr.getErrors(doc, errorsExpected=False, asSequence=True)
        if errors:
            raise Exception("loading doc for board %d: %s" %
                            (id, "; ".join(errors)))
        dom = xml.dom.minidom.parseString(doc.xml)
        for node in dom.documentElement.childNodes:
            if node.nodeName == "OrganizationNameInformation":
                for child in node.childNodes:
                    if child.nodeName == "OfficialName":
                        for grandchild in child.childNodes:
                            if grandchild.nodeName == "Name":
                                self.name = cdr.getTextContent(grandchild)
            elif node.nodeName == "OrganizationType":
                self.boardType = cdr.getTextContent(node)
            elif node.nodeName == "PDQBoardInformation":
                managerNode = None
                phoneNode = None
                emailNode = None
                for child in node.childNodes:
                    if child.nodeName == "BoardManager":
                        managerNode = child
                    elif child.nodeName == "BoardManagerPhone":
                        phoneNode = child
                    elif child.nodeName == "BoardManagerEmail":
                        emailNode = child
                    elif child.nodeName == "BoardMeetings":
                        for grandchild in child.childNodes:
                            if grandchild.nodeName == 'BoardMeeting':
                                md = self.MeetingDate(grandchild)
                                if md.date >= today:
                                    self.meetingDates.append(md)
                    elif child.nodeName == "AdvisoryBoardFor":
                        edBoardId = child.getAttribute("cdr:ref")
                        self.edBoardId = cdr.exNormalize(edBoardId)[1]
                self.manager = self.Manager(managerNode, phoneNode, emailNode)
        if not self.name or not self.name.strip():
            raise Exception("no name found for board in document %d" % id)
        if not self.manager:
            raise Exception("no board manager found in document %d" % id)
        self.boardValues = BoardValues.findBoardValues(self.name)
        self.summaryType = self.boardValues.summaryType
        self.workingGroups = self.boardValues.workingGroupBlock
        self.invitePara = self.boardValues.invitationParagraph
        self.meetingDates.sort(key=lambda a: a.date)
        self.name = self.name.strip()
        if self.boardType.upper() == 'PDQ ADVISORY BOARD':
            self.advBoardId = self.id
            self.advBoardName = self.name
            self.edBoardName = self.__getBoardName(self.edBoardId)
        elif self.boardType.upper() == 'PDQ EDITORIAL BOARD':
            self.edBoardId = self.id
            self.edBoardName = self.name
            self.advBoardId = self.__findAdvBoardFor(self.id)
            self.advBoardName = self.__getBoardName(self.advBoardId)
        else:
            raise Exception('Board type: %s' % self.boardType)
コード例 #8
0
 def __init__(self, cursor, docId, docVer = None):
     self.docId = cdr.exNormalize(docId)[1]
     self.docVer = docVer
     self.mimeType = self.filename = None
     if docVer:
         cursor.execute("""\
             SELECT xml
               FROM doc_version
              WHERE id = ?
                AND num = ?""", (self.docId, self.docVer))
     else:
         cursor.execute("""\
             SELECT xml
               FROM document
              WHERE id = ?""", self.docId)
     rows = cursor.fetchall()
     if not rows:
         if docVer:
             raise Exception("Cannot find version %s of CDR%s" %
                             (docVer, docId))
         else:
             raise Exception("Cannot find CDR%s" % docId)
     try:
         tree = etree.XML(rows[0][0])
     except Exception as e:
         try:
             tree = etree.XML(rows[0][0].encode("utf-8"))
         except Exception as e:
             raise Exception("parsing CDR%s: %s" % (docId, e))
     if tree.tag == 'Media':
         for medium in ('Image', 'Sound', 'Video'):
             xpath = 'PhysicalMedia/%sData/%sEncoding' % (medium, medium)
             for e in tree.findall(xpath):
                 encoding = e.text
                 self.mimeType = {
                     'GIF': 'image/gif',
                     'JPEG': 'image/jpeg',
                     'PNG': 'image/png',
                     'MP3': 'audio/mpeg',
                     'RAM': 'audio/x-pn-realaudio',
                     'WAV': 'audio/x-wav',
                     'WMA': 'audio/x-ms-wma',
                     'AVI': 'video/x-msvideo',
                     'MPEG2': 'video/mpeg2',
                     'MJPG': 'video/x-motion-jpeg' }.get(encoding)
                 suffix = {
                     'GIF': 'gif',
                     'JPEG': 'jpg',
                     'PNG': 'png',
                     'MP3': 'mp3',
                     'RAM': 'ram',
                     'WAV': 'wav',
                     'AVI': 'avi',
                     'MPEG2': 'mpeg',
                     'MJPG': 'mjpg' }.get(encoding, 'bin')
                 self.filename = DocInfo.makeFilename(self.docId, docVer,
                                                      suffix)
     elif tree.tag == 'SupplementaryInfo':
         for e in tree.findall('MimeType'):
             self.mimeType = e.text
         for e in tree.findall('OriginalFilename'):
             self.filename = e.text
         if not self.filename:
             suffix = {
                 'application/pdf': 'pdf',
                 'application/msword': 'doc',
                 'application/vnd.ms-excel': 'xls',
                 "application/vnd.openxlmformats-officedocument."
                 "spreadsheetml.sheet": "xlsx",
                 'application/vnd.wordperfect': 'wpd',
                 'application/vnd.ms-powerpoint': 'ppt',
                 'application/zip': 'zip',
                 'text/html': 'html',
                 'text/plain': 'txt',
                 'text/rtf': 'rtf',
                 'message/rfc822': 'eml',
                 'image/jpeg': 'jpg' }.get(self.mimeType, 'bin')
             self.filename = DocInfo.makeFilename(self.docId, docVer,
                                                  suffix)
     else:
         raise Exception("don't know about '%s' documents" % tree.tag)
     if not self.mimeType:
         if docVer:
             raise Exception("unable to determine mime type for "
                             "version %s of CDR%d" %
                             (docVer, self.docId))
         else:
             raise Exception("unable to determine mime type for "
                             "CDR%d" % self.docId)
コード例 #9
0
ファイル: UnlockCdrDoc.py プロジェクト: NCIOCPL/cdr-tools
#!/usr/bin/env python
#----------------------------------------------------------------------
#
# Unlock a document by its doc id.
#
#----------------------------------------------------------------------
import cdr, sys

if len(sys.argv) != 4:
    sys.stderr.write("usage: UnlockCdrDoc userId pw docId\n")
    sys.exit(1)

session = cdr.login(sys.argv[1], sys.argv[2])
if session.find("<Err") != -1:
    sys.stderr.write("Failure logging in to CDR: %s" % session)
    sys.exit(1)

# Accept doc id in any form, normalize to CDR000... form
docId = cdr.exNormalize(sys.argv[3])[0]

err = cdr.unlock(session, docId)
if err:
    sys.stderr.write("Failure unlocking %s: %s" % (docId, err))
else:
    print("unlocked " + docId)
コード例 #10
0
def main():

    #------------------------------------------------------------------
    # 1. Parse the command-line options and arguments.
    #------------------------------------------------------------------
    op = createOptionParser()
    (options, args) = op.parse_args()
    if len(args) != 4:
        op.error("incorrect number of arguments")
    uid, pwd, idArg, filename = args
    if not options.publishable:
        options.publishable = 'N'
    elif options.publishable == 'Y':
        options.version = 'Y'
    fullId, intId, fragId = cdr.exNormalize(idArg)

    # If no comment is specified the last comment used (from the
    # all_docs table) would be stored.
    # Setting the comment to something to overwrite the last comment
    # -----------------------------------------------------------------
    if not options.comment:
        options.comment = "Filter title changed"

    #------------------------------------------------------------------
    # 2. Load the new version of the filter from the file system.
    #------------------------------------------------------------------
    fp = open(filename, 'r')
    docXml = fp.read()
    fp.close()
    if ']]>' in docXml:
        op.error("CdrDoc wrapper must be stripped from the file")

    #------------------------------------------------------------------
    # 3. Log into the CDR on the target server.
    #------------------------------------------------------------------
    session = cdr.login(uid, pwd)
    checkForProblems(session, op)

    #------------------------------------------------------------------
    # 4. Check out the document from the target CDR server.
    #------------------------------------------------------------------
    docObj = cdr.getDoc(session, fullId, checkout='Y', getObject=True)
    checkForProblems(docObj, op)

    #------------------------------------------------------------------
    # 5. Plug in the new title for the filter.
    #------------------------------------------------------------------
    docObj.ctrl['DocTitle'] = getNewTitle(docXml)

    #------------------------------------------------------------------
    # 6. Store the new version on the target CDR server.
    #------------------------------------------------------------------
    doc = str(docObj)
    print('Versioned: %s, Publishable: %s' %
          (options.version, options.publishable))
    cdrId = cdr.repDoc(session,
                       doc=doc,
                       checkIn="Y",
                       setLinks="N",
                       reason=options.comment,
                       comment=options.comment,
                       ver=options.version,
                       verPublishable=options.publishable)
    checkForProblems(cdrId, op)

    #------------------------------------------------------------------
    # 7. Report the number of the latest version.
    #------------------------------------------------------------------
    versions = cdr.lastVersions(session, cdrId)
    if options.version == "N":
        print("CWD for %s updated" % cdrId)
    else:
        print("Latest version of %s is %d" % (cdrId, versions[0]))
    print("")
    print("DON'T FORGET TO CHANGE THE TITLE OF THIS FILTER ON ALL TIERS!")