def user_info():
selected_user = request.args.get("user_id")
all_trials = fetch_trials(session["jwt_token"])
all_assays = fetch_assays(session["jwt_token"])
retrieved_user_info = fetch_single_user(session["jwt_token"],
selected_user)
register_form = RegistrationForm(
email=retrieved_user_info["email"],
contact_email=retrieved_user_info.get("preferred_contact_email"),
organization=retrieved_user_info.get("organization"),
first_n=retrieved_user_info.get("first_n"),
last_n=retrieved_user_info.get("last_n"),
cidc_role=retrieved_user_info.get("position_description"),
permissions=retrieved_user_info.get("permissions"),
)
# Fetch trials the user is a collaborator on.
users_trials = fetch_users_trials(session["jwt_token"],
retrieved_user_info["email"])["_items"]
# Build a dict with the fancy names for the objects that make up permissions.
permission_display = []
for permission in retrieved_user_info["permissions"]:
trial_name = next(
(trial
for trial in all_trials if trial["_id"] == permission["trial"]),
None)["trial_name"]
assay_name = next(
(assay
for assay in all_assays if assay["_id"] == permission["assay"]),
None)["assay_name"]
permission_display.append({
"trial": trial_name,
"assay": assay_name,
"role": permission["role"]
})
return render_template(
"admin_user_info.jinja2",
retrieved_user_info=retrieved_user_info,
register_form=register_form,
users_trials=users_trials,
role_list=ROLE_LIST,
update_role_url=url_for_with_prefix("/admin/update_role"),
add_user_to_trial_url=url_for_with_prefix("/admin/add_user_trial"),
remove_user_from_trial_url=url_for_with_prefix(
"/admin/remove_user_from_trial"),
trial_assay_permission_types=TRIAL_ASSAY_PERMISSION_TYPES,
assays=all_assays,
all_trials=all_trials,
permissions_display=permission_display,
)
def remove_user_trial():
user_id = request.form.get("user_id")
new_trial = request.form.get("remove_user_from_trial")
remove_user_from_trial(session["jwt_token"], new_trial, [user_id])
return redirect(
url_for_with_prefix("/admin/user_info?user_id=%s" % user_id))
def update_role():
user_id = request.form.get("user_id")
new_role = request.form.get("system_role")
change_user_role(session["jwt_token"], user_id, new_role)
return redirect(
url_for_with_prefix("/admin/user_info?user_id=%s" % user_id))
def remove_upload():
session["cidc_user_info"] = get_user_info(session["jwt_token"])
data_id = request.form.get("data_id")
remove_data_record(session["jwt_token"], data_id)
return redirect(url_for_with_prefix("/cimac_biofx/uploads"))
def wrapped(*args, **kwargs):
if (
"jwt_token" not in session
or session["jwt_token"] is None
or "cidc_user_info" not in session
or session["cidc_user_info"]["role"] is None
):
return redirect(url_for_with_prefix("/login"))
return f(*args, **kwargs)
def uploads():
session["cidc_user_info"] = get_user_info(session["jwt_token"])
olink_uploads = get_olink_status(session["jwt_token"])
return render_template("upload_status.jinja2",
jwt=session["jwt_token"],
olink_uploads=olink_uploads,
remove_uploaded_file_url=url_for_with_prefix(
"/cimac_biofx/remove-upload"))
def add_user_trial():
user_id = request.form.get("user_id")
new_trial = request.form.get("add_user_to_trial")
assay_type = request.form.get("assay_type")
trial_permission = request.form.get("trial_permission")
add_user_to_trial(session["jwt_token"], new_trial, [user_id], assay_type,
trial_permission)
return redirect(
url_for_with_prefix("/admin/user_info?user_id=%s" % user_id))