def test_multiple_mlf_files():
os.chdir(data_path)
feature_dim = 33
num_classes = 132
context = 2
test_mlf_path = "../../../../Tests/EndToEndTests/Speech/Data/glob_00001.mlf"
features_file = "glob_0000.scp"
label_files = ["glob_0000.mlf", test_mlf_path]
label_mapping_file = "state.list"
fd = HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(
shape=feature_dim, context=(context, context), scp=features_file)))
ld = HTKMLFDeserializer(
label_mapping_file,
StreamDefs(
awesome_labels=StreamDef(shape=num_classes, mlf=label_files)))
# Make sure we can read at least one minibatch.
mbsource = MinibatchSource([fd, ld])
mbsource.next_minibatch(1)
os.chdir(abs_path)
def test_htk_deserializers():
mbsize = 640
epoch_size = 1000 * mbsize
lr = [0.001]
feature_dim = 33
num_classes = 132
context = 2
os.chdir(data_path)
features_file = "glob_0000.scp"
labels_file = "glob_0000.mlf"
label_mapping_file = "state.list"
fd = HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(
shape=feature_dim, context=(context, context), scp=features_file)))
ld = HTKMLFDeserializer(
label_mapping_file,
StreamDefs(
awesome_labels=StreamDef(shape=num_classes, mlf=labels_file)))
reader = MinibatchSource([fd, ld])
features = C.input_variable(((2 * context + 1) * feature_dim))
labels = C.input_variable((num_classes))
model = Sequential(
[For(range(3), lambda: Recurrence(LSTM(256))),
Dense(num_classes)])
z = model(features)
ce = C.cross_entropy_with_softmax(z, labels)
errs = C.classification_error(z, labels)
learner = C.adam_sgd(z.parameters,
lr=C.learning_rate_schedule(lr, C.UnitType.sample,
epoch_size),
momentum=C.momentum_as_time_constant_schedule(1000),
low_memory=True,
gradient_clipping_threshold_per_sample=15,
gradient_clipping_with_truncation=True)
trainer = C.Trainer(z, (ce, errs), learner)
input_map = {
features: reader.streams.amazing_features,
labels: reader.streams.awesome_labels
}
pp = C.ProgressPrinter(freq=0)
# just run and verify it doesn't crash
for i in range(3):
mb_data = reader.next_minibatch(mbsize, input_map=input_map)
trainer.train_minibatch(mb_data)
pp.update_with_trainer(trainer, with_metric=True)
assert True
os.chdir(abs_path)
def create_mb_source(features_file, labels_file, label_mapping_filem, total_number_of_samples):
for file_name in [features_file, labels_file, label_mapping_file]:
if not os.path.exists(file_name):
raise RuntimeError("File '%s' does not exist. Please check that datadir argument is set correctly." % (file_name))
fd = HTKFeatureDeserializer(StreamDefs(
amazing_features = StreamDef(shape=feature_dim, context=(context,context), scp=features_file)))
ld = HTKMLFDeserializer(label_mapping_file, StreamDefs(
awesome_labels = StreamDef(shape=num_classes, mlf=labels_file)))
# Enabling BPTT with truncated_length > 0
return MinibatchSource([fd,ld], truncation_length=250, epoch_size=total_number_of_samples)
def decode_model(use_gpu=True, gpu_id=0):
# use GPU or CPU according to parameters
try_set_default_device(gpu(gpu_id) if use_gpu else cpu())
model_dnn = load_model("./model/speech_enhancement.model")
features_file = "./test_normed.scp"
feature_dim = 257
test_reader = MinibatchSource(HTKFeatureDeserializer(StreamDefs(
amazing_features=StreamDef(
shape=feature_dim, context=(3, 3),
scp=features_file))),
randomize=False, frame_mode=False)
eval_input_map = {input: test_reader.streams.amazing_features}
f = open(features_file)
line = f.readline()
while line:
temp_input_path = line.split(']')[0]
mb_size = temp_input_path.split(',')[-1]
mb_size = int(mb_size) + 1
noisy_fea = test_reader.next_minibatch(
mb_size, input_map=eval_input_map)
real_noisy_fea = noisy_fea[input].data
node_in_graph = model_dnn.find_by_name('irm')
output_nodes = combine([node_in_graph.owner])
out_noisy_fea = output_nodes.eval(real_noisy_fea)
# out_noisy_fea = as_composite(model_dnn.output1[0].owner).eval(
# real_noisy_fea)
out_SE_noisy_fea = np.concatenate((out_noisy_fea), axis=0)
out_file_path = line.split('=')[0]
out_file_name = os.path.join('./enhanced_norm_fea_mat', out_file_path)
out_file_fullpath = os.path.split(out_file_name)[0]
# print (out_file_fullpath)
if not os.path.exists(out_file_fullpath):
os.makedirs(out_file_fullpath)
sio.savemat(out_file_name, {'SE': out_SE_noisy_fea})
line = f.readline()
f.close()
def test_multiple_streams_in_htk():
feature_dim = 33
context = 2
os.chdir(data_path)
features_file = "glob_0000.scp"
fd = HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(shape=feature_dim,
context=(context, context),
scp=features_file),
amazing_features2=StreamDef(shape=feature_dim,
context=(context, context),
scp=features_file)))
mbs = MinibatchSource([fd])
mb = mbs.next_minibatch(1)
assert (mb[mbs.streams.amazing_features].asarray() == mb[
mbs.streams.amazing_features2].asarray()).all()
os.chdir(abs_path)
def test_mlf_binary_files():
os.chdir(data_path)
feature_dim = 33
num_classes = 132
context = 2
features_file = "glob_0000.scp"
fd = HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(
shape=feature_dim, context=(context, context), scp=features_file)))
ld = HTKMLFBinaryDeserializer(
StreamDefs(awesome_labels=StreamDef(shape=num_classes,
mlf=e2e_data_path + "mlf2.bin")))
# Make sure we can read at least one minibatch.
mbsource = MinibatchSource([fd, ld])
mbsource.next_minibatch(1)
os.chdir(abs_path)
def decode_model(features_file,
irm_mat_dir,
feature_dim,
use_gpu=True,
gpu_id=0):
"""Applies model to LPS features to generate ideal ratio mask.
Parameters
----------
features_file : str
Path to HTK script file for chunks of LPS features to be processed.
irm_mat_dir : str
Path to output directory for ``.mat`` files containing ideal ratio
masks.
feature_dim : int
Feature dimensionality. Needed to parse HTK binary file containing
features.
use_gpu : bool, optional
If True and GPU is available, perform all processing on GPU.
(Default: True)
gpu_id : int, optional
Id of GPU on which to do computation.
(Default: 0)
"""
if not os.path.exists(irm_mat_dir):
os.makedirs(irm_mat_dir)
# Load model.
with wurlitzer.pipes() as (stdout, stderr):
try_set_default_device(gpu(gpu_id) if use_gpu else cpu())
model_dnn = load_model(MODELF)
# Compute ideal ratio masks for all chunks of LPS features specified in
# the script file and save as .mat files in irm_mat_dir.
with wurlitzer.pipes() as (stdout, stderr):
test_reader = MinibatchSource(HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(
shape=feature_dim, context=(3, 3), scp=features_file))),
randomize=False,
frame_mode=False,
trace_level=0)
eval_input_map = {input: test_reader.streams.amazing_features}
with open(features_file, 'r') as f:
for line in f:
# Parse line of script file to get id for chunk and location of
# corresponding LPS features. Each line has the format:
#
# {CHUNK_ID}={PATH_TO_HTK_BIN}[{START_FRAME_INDEX},{END_FRAME_INDEX}]
line = line.strip()
chunk_id, htk_bin_path, start_ind, end_ind = re.match(
r'(\S+)=(\S+)\[(\d+),(\d+)\]$', line).groups()
start_ind = int(start_ind)
end_ind = int(end_ind)
mb_size = end_ind - start_ind + 1
# Determine IRM features for frames in chunk.
noisy_fea = test_reader.next_minibatch(mb_size,
input_map=eval_input_map)
real_noisy_fea = noisy_fea[input].data
node_name = b'irm' if PY2 else 'irm'
node_in_graph = model_dnn.find_by_name(node_name)
output_nodes = combine([node_in_graph.owner])
with wurlitzer.pipes() as (stdout, stderr):
irm = output_nodes.eval(real_noisy_fea)
if len(irm) == 1:
irm = irm[0]
else:
raise Exception("Unexpected IRM shape: " + str(np.shape(irm)))
# Write .mat file.
sio.savemat(os.path.join(irm_mat_dir, chunk_id + '.mat'),
{'IRM': irm})
def decode_model(features_file,
irm_mat_dir,
feature_dim,
use_gpu=True,
gpu_id=0,
mode=1,
model_select='400h',
stage_select=3):
"""Applies model to LPS features to generate ideal ratio mask.
Parameters
----------
features_file : str
Path to HTK script file for chunks of LPS features to be processed.
irm_mat_dir : str
Path to output directory for ``.mat`` files containing ideal ratio
masks.
feature_dim : int
Feature dimensionality. Needed to parse HTK binary file containing
features.
use_gpu : bool, optional
If True and GPU is available, perform all processing on GPU.
(Default: True)
gpu_id : int, optional
Id of GPU on which to do computation.
(Default: 0)
"""
if not os.path.exists(irm_mat_dir):
os.makedirs(irm_mat_dir)
model_select = str(model_select)
# Load model.
with wurlitzer.pipes() as (stdout, stderr):
try_set_default_device(gpu(gpu_id) if use_gpu else cpu())
if model_select.lower() == '400h':
MODELF = os.path.join(HERE, "model",
"speech_enhancement_400h.model")
model_dnn = load_model(MODELF)
elif model_select.lower() == '1000h':
MODELF = os.path.join(HERE, "model",
"speech_enhancement_1000h.model")
model_dnn = load_model(MODELF)
# Compute ideal ratio masks for all chunks of LPS features specified in
# the script file and save as .mat files in irm_mat_dir.
with wurlitzer.pipes() as (stdout, stderr):
test_reader = MinibatchSource(HTKFeatureDeserializer(
StreamDefs(amazing_features=StreamDef(
shape=feature_dim, context=(3, 3), scp=features_file))),
randomize=False,
frame_mode=False,
trace_level=0)
eval_input_map = {input: test_reader.streams.amazing_features}
with open(features_file, 'r') as f:
for line in f:
# Parse line of script file to get id for chunk and location of
# corresponding LPS features. Each line has the format:
#
# {CHUNK_ID}={PATH_TO_HTK_BIN}[{START_FRAME_INDEX},{END_FRAME_INDEX}]
line = line.strip()
chunk_id, htk_bin_path, start_ind, end_ind = re.match(
r'(\S+)=(\S+)\[(\d+),(\d+)\]$', line).groups()
start_ind = int(start_ind)
end_ind = int(end_ind)
mb_size = end_ind - start_ind + 1
# Determine IRM features for frames in chunk.
noisy_fea = test_reader.next_minibatch(mb_size,
input_map=eval_input_map)
real_noisy_fea = noisy_fea[input].data
if model_select.lower() == '400h':
node_names = [
b'irm' if PY2 else 'irm', b'lps' if PY2 else 'lps'
]
elif model_select.lower() == '1000h':
node_names = [
b'irm_s' + str(stage_select) if PY2 else 'irm_s' +
str(stage_select), b'lps_s' +
str(stage_select) if PY2 else 'lps_s' + str(stage_select)
]
else:
utils.error('Invalid parameter of model_select!!!!!')
outputs_dict = {}
for node_name in node_names:
node_in_graph = model_dnn.find_by_name(node_name)
output_nodes = combine([node_in_graph.owner])
with wurlitzer.pipes() as (stdout, stderr):
value = output_nodes.eval(real_noisy_fea)
value = np.concatenate((value), axis=0)
outputs_dict[node_name] = value
if model_select.lower() == '400h':
sio.savemat(os.path.join(irm_mat_dir, chunk_id + '.mat'), {
'IRM': outputs_dict['irm'],
'LPS': outputs_dict['lps']
})
elif model_select.lower() == '1000h':
sio.savemat(
os.path.join(irm_mat_dir, chunk_id + '.mat'), {
'IRM': outputs_dict['irm_s' + str(stage_select)],
'LPS': outputs_dict['lps_s' + str(stage_select)]
})
import cntk as C
import numpy as np
from cntk.io import MinibatchSource, HTKFeatureDeserializer, StreamDef, StreamDefs
from cntk import load_model, combine
from cntk.device import gpu,try_set_default_device,cpu
from cntk.ops import as_composite
import scipy.io as sio
import os
import sys
GPU_id = int(sys.argv[1])
try_set_default_device(gpu(GPU_id))
model_dnn= load_model("./model/speech_enhancement.model")
features_file = "./test_normed.scp"
feature_dim = 257
test_reader = MinibatchSource(HTKFeatureDeserializer(StreamDefs(
amazing_features = StreamDef(shape=feature_dim,context=(3,3), scp=features_file))),randomize = False,frame_mode=False)
eval_input_map = {input :test_reader.streams.amazing_features}
f = open(features_file)
line = f.readline()
while line:
temp_input_path = line.split(']')[0]
mb_size = temp_input_path.split(',')[-1]
mb_size = int(mb_size) + 1
noisy_fea=test_reader.next_minibatch(mb_size, input_map = eval_input_map)
real_noisy_fea=noisy_fea[input].data
node_in_graph = model_dnn.find_by_name('irm')
output_nodes = combine([node_in_graph.owner])
out_noisy_fea = output_nodes.eval(real_noisy_fea)
# out_noisy_fea = as_composite(model_dnn.output1[0].owner).eval(real_noisy_fea)