コード例 #1
0
def unzip(zip_path, temp_path, file_name):
    '''
    Take an absolute path to a zip file |zip_path| and return the path to a file or
    directory called |file_name| in |temp_path| containing its unzipped
    contents.
    Assume the zip file contains one file/directory called |file_name|.
    If |file_name| is not specified, then return the temp_path itself.
    '''
    path_util.check_isfile(zip_path, 'unzip_directory')
    if file_name:
        temp_subpath = os.path.join(temp_path, file_name)
    else:
        temp_subpath = temp_path

    print_util.open_line('Unzipping %s to %s' % (zip_path, temp_subpath))
    if os.system("cd %s && unzip -q %s" % (temp_path, zip_path)) != 0:
        raise UsageError('unzip failed')
    print_util.clear_line()
    # Corner case: note that the temp_subpath might not 'exist' because it is a
    # symlink (which is broken until it's put in the right place).
    if not os.path.exists(temp_subpath) and not os.path.islink(temp_subpath):
        raise UsageError('Zip file %s missing %s (%s doesn\'t exist)' %
                         (zip_path, file_name, temp_subpath))

    return temp_subpath
コード例 #2
0
def zip(path, follow_symlinks, exclude_patterns, file_name):
    '''
    Take a path to a file or directory |path| and return the path to a zip archive
    containing its contents.  |file_name| is what the zip archive contains.
    '''
    if isinstance(path, list):
        for p in path:
            absolute_path = path_util.normalize(p)
            path_util.check_isvalid(absolute_path, 'zip_directory')
    else:
        absolute_path = path_util.normalize(path)
        path_util.check_isvalid(absolute_path, 'zip_directory')

    # Recursively copy the directory into a temp directory.
    temp_path = tempfile.mkdtemp()
    temp_subpath = os.path.join(temp_path, file_name)

    print_util.open_line('Copying %s to %s' % (path, temp_subpath))
    if isinstance(path, list):
        os.mkdir(temp_subpath)
        for p in path:
            absolute_path = path_util.normalize(p)
            path_util.copy(absolute_path,
                           os.path.join(temp_subpath, os.path.basename(p)),
                           follow_symlinks=follow_symlinks,
                           exclude_patterns=exclude_patterns)
    else:
        absolute_path = path_util.normalize(path)
        path_util.copy(absolute_path,
                       temp_subpath,
                       follow_symlinks=follow_symlinks,
                       exclude_patterns=exclude_patterns)
    print_util.clear_line()

    zip_path = temp_path + '.zip'
    opts = '-qr'
    if not follow_symlinks: opts += ' --symlinks'
    print_util.open_line('Zipping to %s' % zip_path)
    if os.system("cd %s && zip %s %s %s" %
                 (temp_path, opts, zip_path, file_name)) != 0:
        raise UsageError('zip failed')

    path_util.remove(temp_path)
    return zip_path
コード例 #3
0
def unzip(zip_path, temp_path, file_name):
    '''
    Take an absolute path to a zip file |zip_path| and return the path to a file or
    directory called |file_name| in |temp_path| containing its unzipped
    contents.
    Assume the zip file really contains one thing called |file_name|.
    '''
    path_util.check_isfile(zip_path, 'unzip_directory')
    temp_subpath = os.path.join(temp_path, file_name)

    print_util.open_line('Unzipping %s to %s' % (zip_path, temp_subpath))
    if os.system("cd %s && unzip -q %s" % (temp_path, zip_path)) != 0:
        raise UsageError('unzip failed')
    print_util.clear_line()
    # Corner case: note that the temp_subpath might not 'exist' because it is a
    # symlink (which is broken until it's put in the right place).
    if not os.path.exists(temp_subpath) and not os.path.islink(temp_subpath):
        raise UsageError('Zip file %s missing %s (%s doesn\'t exist)' % (zip_path, file_name, temp_subpath))

    return temp_subpath
コード例 #4
0
ファイル: zip_util.py プロジェクト: pbhatnagar3/codalab-cli
def zip(path, follow_symlinks, exclude_patterns, file_name):
    '''
    Take a path to a file or directory |path| and return the path to a zip archive
    containing its contents.  |file_name| is what the zip archive contains.
    '''
    if isinstance(path, list):
        for p in path:
            absolute_path = path_util.normalize(p)
            path_util.check_isvalid(absolute_path, 'zip_directory')
    else:
        absolute_path = path_util.normalize(path)
        path_util.check_isvalid(absolute_path, 'zip_directory')

    # Recursively copy the directory into a temp directory.
    temp_path = tempfile.mkdtemp()
    temp_subpath = os.path.join(temp_path, file_name)

    print_util.open_line('Copying %s to %s' % (path, temp_subpath))
    if isinstance(path, list):
        os.mkdir(temp_subpath)
        for p in path:
            absolute_path = path_util.normalize(p)
            path_util.copy(absolute_path, os.path.join(temp_subpath, os.path.basename(p)), follow_symlinks=follow_symlinks, exclude_patterns=exclude_patterns)
    else:
        absolute_path = path_util.normalize(path)
        path_util.copy(absolute_path, temp_subpath, follow_symlinks=follow_symlinks, exclude_patterns=exclude_patterns)
    print_util.clear_line()

    zip_path = temp_path + '.zip'
    opts = '-qr'
    if not follow_symlinks: opts += ' --symlinks'
    print_util.open_line('Zipping to %s' % zip_path)
    if os.system("cd %s && zip %s %s %s" % (temp_path, opts, zip_path, file_name)) != 0:
        raise UsageError('zip failed')

    path_util.remove(temp_path)
    return zip_path
コード例 #5
0
ファイル: bundle_store.py プロジェクト: kelvinguu/codalab-cli
    def upload(self, sources, follow_symlinks, exclude_patterns, git, unpack, remove_sources):
        '''
        |sources|: specifies the locations of the contents to upload.  Each element is either a URL or a local path.
        |follow_symlinks|: for local path(s), whether to follow (resolve) symlinks
        |exclude_patterns|: for local path(s), don't upload these patterns (e.g., *.o)
        |git|: for URL, whether |source| is a git repo to clone.
        |unpack|: for each source in |sources|, whether to unpack it if it's an archive.
        |remove_sources|: remove |sources|.

        If |sources| contains one source, then the bundle contents will be that source.
        Otherwise, the bundle contents will be a directory with each of the sources.
        Exceptions:
        - If |git|, then each source is replaced with the result of running 'git clone |source|'
        - If |unpack| is True or a source is an archive (zip, tar.gz, etc.), then unpack the source.

        Install the contents of the directory at |source| into
        DATA_SUBDIRECTORY in a subdirectory named by a hash of the contents.

        Return a (data_hash, metadata) pair, where the metadata is a dict mapping
        keys to precomputed statistics about the new data directory.
        '''
        to_delete = []

        # Create temporary directory as a staging area and put everything there.
        temp_path = tempfile.mkdtemp('-bundle_store_upload')
        temp_subpaths = []
        for source in sources:
            # Where to save |source| to (might change this value if we unpack).
            temp_subpath = os.path.join(temp_path, os.path.basename(source))
            if remove_sources:
                to_delete.append(source)
            source_unpack = unpack and zip_util.path_is_archive(source)

            if path_util.path_is_url(source):
                # Download the URL.
                print_util.open_line('BundleStore.upload: downloading %s to %s' % (source, temp_path))
                if git:
                    file_util.git_clone(source, temp_subpath)
                else:
                    file_util.download_url(source, temp_subpath, print_status=True)
                    if source_unpack:
                        zip_util.unpack(temp_subpath, zip_util.strip_archive_ext(temp_subpath))
                        path_util.remove(temp_subpath)
                        temp_subpath = zip_util.strip_archive_ext(temp_subpath)
                print_util.clear_line()
            else:
                # Copy the local path.
                source_path = path_util.normalize(source)
                path_util.check_isvalid(source_path, 'upload')

                # Recursively copy the directory into a new BundleStore temp directory.
                print_util.open_line('BundleStore.upload: %s => %s' % (source_path, temp_subpath))
                if source_unpack:
                    zip_util.unpack(source_path, zip_util.strip_archive_ext(temp_subpath))
                    temp_subpath = zip_util.strip_archive_ext(temp_subpath)
                else:
                    if remove_sources:
                        path_util.rename(source_path, temp_subpath)
                    else:
                        path_util.copy(source_path, temp_subpath, follow_symlinks=follow_symlinks, exclude_patterns=exclude_patterns)
                print_util.clear_line()

            temp_subpaths.append(temp_subpath)

        # If exactly one source, then upload that directly.
        if len(temp_subpaths) == 1:
            to_delete.append(temp_path)
            temp_path = temp_subpaths[0]

        # Multiplex between uploading a directory and uploading a file here.
        # All other path_util calls will use these lists of directories and files.
        if os.path.isdir(temp_path):
            dirs_and_files = path_util.recursive_ls(temp_path)
        else:
            dirs_and_files = ([], [temp_path])

        # Hash the contents of the temporary directory, and then if there is no
        # data with this hash value, move this directory into the data directory.
        print_util.open_line('BundleStore.upload: hashing %s' % temp_path)
        data_hash = '0x%s' % (path_util.hash_directory(temp_path, dirs_and_files),)
        print_util.clear_line()
        print_util.open_line('BundleStore.upload: computing size of %s' % temp_path)
        data_size = path_util.get_size(temp_path, dirs_and_files)
        print_util.clear_line()
        final_path = os.path.join(self.data, data_hash)
        if os.path.exists(final_path):
            # Already exists, just delete it
            path_util.remove(temp_path)
        else:
            print >>sys.stderr, 'BundleStore.upload: moving %s to %s' % (temp_path, final_path)
            path_util.rename(temp_path, final_path)

        # Delete paths.
        for path in to_delete:
            if os.path.exists(path):
                path_util.remove(path)

        # After this operation there should always be a directory at the final path.
        assert(os.path.lexists(final_path)), 'Uploaded to %s failed!' % (final_path,)
        return (data_hash, {'data_size': data_size})
コード例 #6
0
    def upload(self, sources, follow_symlinks, exclude_patterns, git, unpack, remove_sources, uuid):
        """
        |sources|: specifies the locations of the contents to upload.  Each element is either a URL or a local path.
        |follow_symlinks|: for local path(s), whether to follow (resolve) symlinks
        |exclude_patterns|: for local path(s), don't upload these patterns (e.g., *.o)
        |git|: for URL, whether |source| is a git repo to clone.
        |unpack|: for each source in |sources|, whether to unpack it if it's an archive.
        |remove_sources|: remove |sources|.

        If |sources| contains one source, then the bundle contents will be that source.
        Otherwise, the bundle contents will be a directory with each of the sources.
        Exceptions:
        - If |git|, then each source is replaced with the result of running 'git clone |source|'
        - If |unpack| is True or a source is an archive (zip, tar.gz, etc.), then unpack the source.

        Install the contents of the directory at |source| into
        DATA_SUBDIRECTORY in a subdirectory named by a hash of the contents.

        Return a (data_hash, metadata) pair, where the metadata is a dict mapping
        keys to precomputed statistics about the new data directory.
        """
        to_delete = []

        # If just a single file, set the final path to be equal to that file
        single_path = len(sources) == 1

        # Determine which disk this will go on
        disk_choice = self.ring.get_node(uuid)

        final_path = os.path.join(self.partitions, disk_choice, self.DATA_SUBDIRECTORY, uuid)
        if os.path.exists(final_path):
            raise UsageError('Path %s already present in bundle store' % final_path)
        # Only make if not there
        elif not single_path:
            path_util.make_directory(final_path)

        # Paths to resources
        subpaths = []

        for source in sources:
            # Where to save |source| to (might change this value if we unpack).
            if not single_path:
                subpath = os.path.join(final_path, os.path.basename(source))
            else:
                subpath = final_path

            if remove_sources:
                to_delete.append(source)
            source_unpack = unpack and zip_util.path_is_archive(source)

            if source_unpack and single_path:
                # Load the file into the bundle store under the given path
                subpath += zip_util.get_archive_ext(source)

            if path_util.path_is_url(source):
                # Download the URL.
                print_util.open_line('BundleStore.upload: downloading %s to %s' % (source, subpath))
                if git:
                    file_util.git_clone(source, subpath)
                else:
                    file_util.download_url(source, subpath, print_status=True)
                    if source_unpack:
                        zip_util.unpack(subpath, zip_util.strip_archive_ext(subpath))
                        path_util.remove(subpath)
                        subpath = zip_util.strip_archive_ext(subpath)
                print_util.clear_line()
            else:
                # Copy the local path.
                source_path = path_util.normalize(source)
                path_util.check_isvalid(source_path, 'upload')

                # Recursively copy the directory into the BundleStore
                print_util.open_line('BundleStore.upload: %s => %s' % (source_path, subpath))
                if source_unpack:
                    zip_util.unpack(source_path, zip_util.strip_archive_ext(subpath))
                    subpath = zip_util.strip_archive_ext(subpath)
                else:
                    if remove_sources:
                        path_util.rename(source_path, subpath)
                    else:
                        path_util.copy(source_path, subpath, follow_symlinks=follow_symlinks, exclude_patterns=exclude_patterns)
                print_util.clear_line()

            subpaths.append(subpath)

        dirs_and_files = None
        if os.path.isdir(final_path):
            dirs_and_files = path_util.recursive_ls(final_path)
        else:
            dirs_and_files = [], [final_path]

        # Hash the contents of the bundle directory. Update the data_hash attribute
        # for the bundle
        print_util.open_line('BundleStore.upload: hashing %s' % final_path)
        data_hash = '0x%s' % (path_util.hash_directory(final_path, dirs_and_files))
        print_util.clear_line()
        print_util.open_line('BundleStore.upload: computing size of %s' % final_path)
        data_size = path_util.get_size(final_path, dirs_and_files)
        print_util.clear_line()

        # Delete paths.
        for path in to_delete:
            if os.path.exists(path):
                path_util.remove(path)

        # After this operation there should always be a directory at the final path.
        assert (os.path.lexists(final_path)), 'Uploaded to %s failed!' % (final_path,)
        return (data_hash, {'data_size': data_size})
コード例 #7
0
    def upload(self, path, follow_symlinks, exclude_patterns):
        '''
        Copy the contents of the directory at |path| into the data subdirectory,
        in a subfolder named by a hash of the contents of the new data directory.
        If |path| is in a temporary directory, then we just move it.

        Return a (data_hash, metadata) pair, where the metadata is a dict mapping
        keys to precomputed statistics about the new data directory.
        '''
        # Create temporary directory as a staging area.
        # If |path| is already temporary, then we use that directly
        # (with the understanding that |path| will be moved)
        if not isinstance(path, list) and os.path.realpath(path).startswith(
                os.path.realpath(self.temp)):
            temp_path = path
        else:
            temp_path = os.path.join(self.temp, uuid.uuid4().hex)

        if not isinstance(path, list) and path_util.path_is_url(path):
            # Have to be careful.  Want to make sure if we're fetching a URL
            # that points to a file, we are allowing this.
            if path.startswith('file://'):
                path_suffix = path[7:]
                if os.path.islink(path_suffix):
                    raise UsageError('Not allowed to upload symlink %s' %
                                     path_suffix)
                if not any(
                        path_suffix.startswith(f)
                        for f in self.direct_upload_paths):
                    raise UsageError(
                        'Not allowed to upload %s (only %s allowed)' %
                        (path_suffix, self.direct_upload_paths))

            # Download |path| if it is a URL.
            print >> sys.stderr, 'BundleStore.upload: downloading %s to %s' % (
                path, temp_path)
            file_util.download_url(path, temp_path, print_status=True)
        elif path != temp_path:
            # Copy |path| into the temp_path.
            if isinstance(path, list):
                absolute_path = [path_util.normalize(p) for p in path]
                for p in absolute_path:
                    path_util.check_isvalid(p, 'upload')
            else:
                absolute_path = path_util.normalize(path)
                path_util.check_isvalid(absolute_path, 'upload')

            # Recursively copy the directory into a new BundleStore temp directory.
            print_util.open_line('BundleStore.upload: copying %s to %s' %
                                 (absolute_path, temp_path))
            path_util.copy(absolute_path,
                           temp_path,
                           follow_symlinks=follow_symlinks,
                           exclude_patterns=exclude_patterns)
            print_util.clear_line()

        # Multiplex between uploading a directory and uploading a file here.
        # All other path_util calls will use these lists of directories and files.
        if os.path.isdir(temp_path):
            dirs_and_files = path_util.recursive_ls(temp_path)
        else:
            dirs_and_files = ([], [temp_path])

        # Hash the contents of the temporary directory, and then if there is no
        # data with this hash value, move this directory into the data directory.
        print_util.open_line('BundleStore.upload: hashing %s' % temp_path)
        data_hash = '0x%s' % (path_util.hash_directory(temp_path,
                                                       dirs_and_files), )
        print_util.clear_line()
        print_util.open_line('BundleStore.upload: computing size of %s' %
                             temp_path)
        data_size = path_util.get_size(temp_path, dirs_and_files)
        print_util.clear_line()
        final_path = os.path.join(self.data, data_hash)
        final_path_exists = False
        try:
            # If data_hash already exists, then we don't need to move it over.
            os.utime(final_path, None)
            final_path_exists = True
        except OSError, e:
            if e.errno == errno.ENOENT:
                print >> sys.stderr, 'BundleStore.upload: moving %s to %s' % (
                    temp_path, final_path)
                path_util.rename(temp_path, final_path)
            else:
                raise
コード例 #8
0
    def upload(self, path, follow_symlinks, exclude_patterns):
        """
        Copy the contents of the directory at |path| into the data subdirectory,
        in a subfolder named by a hash of the contents of the new data directory.
        If |path| is in a temporary directory, then we just move it.

        Return a (data_hash, metadata) pair, where the metadata is a dict mapping
        keys to precomputed statistics about the new data directory.
        """
        # Create temporary directory as a staging area.
        # If |path| is already temporary, then we use that directly
        # (with the understanding that |path| will be moved)
        if not isinstance(path, list) and os.path.realpath(path).startswith(os.path.realpath(self.temp)):
            temp_path = path
        else:
            temp_path = os.path.join(self.temp, uuid.uuid4().hex)

        if not isinstance(path, list) and path_util.path_is_url(path):
            # Have to be careful.  Want to make sure if we're fetching a URL
            # that points to a file, we are allowing this.
            if path.startswith("file://"):
                path_suffix = path[7:]
                if os.path.islink(path_suffix):
                    raise UsageError("Not allowed to upload symlink %s" % path_suffix)
                if not any(path_suffix.startswith(f) for f in self.direct_upload_paths):
                    raise UsageError(
                        "Not allowed to upload %s (only %s allowed)" % (path_suffix, self.direct_upload_paths)
                    )

            # Download |path| if it is a URL.
            print >>sys.stderr, "BundleStore.upload: downloading %s to %s" % (path, temp_path)
            file_util.download_url(path, temp_path, print_status=True)
        elif path != temp_path:
            # Copy |path| into the temp_path.
            if isinstance(path, list):
                absolute_path = [path_util.normalize(p) for p in path]
                for p in absolute_path:
                    path_util.check_isvalid(p, "upload")
            else:
                absolute_path = path_util.normalize(path)
                path_util.check_isvalid(absolute_path, "upload")

            # Recursively copy the directory into a new BundleStore temp directory.
            print_util.open_line("BundleStore.upload: copying %s to %s" % (absolute_path, temp_path))
            path_util.copy(absolute_path, temp_path, follow_symlinks=follow_symlinks, exclude_patterns=exclude_patterns)
            print_util.clear_line()

        # Multiplex between uploading a directory and uploading a file here.
        # All other path_util calls will use these lists of directories and files.
        if os.path.isdir(temp_path):
            dirs_and_files = path_util.recursive_ls(temp_path)
        else:
            dirs_and_files = ([], [temp_path])

        # Hash the contents of the temporary directory, and then if there is no
        # data with this hash value, move this directory into the data directory.
        print_util.open_line("BundleStore.upload: hashing %s" % temp_path)
        data_hash = "0x%s" % (path_util.hash_directory(temp_path, dirs_and_files),)
        print_util.clear_line()
        print_util.open_line("BundleStore.upload: computing size of %s" % temp_path)
        data_size = path_util.get_size(temp_path, dirs_and_files)
        print_util.clear_line()
        final_path = os.path.join(self.data, data_hash)
        final_path_exists = False
        try:
            # If data_hash already exists, then we don't need to move it over.
            os.utime(final_path, None)
            final_path_exists = True
        except OSError, e:
            if e.errno == errno.ENOENT:
                print >>sys.stderr, "BundleStore.upload: moving %s to %s" % (temp_path, final_path)
                path_util.rename(temp_path, final_path)
            else:
                raise