コード例 #1
0
ファイル: test_alphabet.py プロジェクト: aglucaci/cogent3
    def test_init(self):
        """Enumeration init should work from any sequence"""
        a = Enumeration("abc")
        self.assertEqual(a.index("a"), 0)
        self.assertEqual(a.index("b"), 1)
        self.assertEqual(a.index("c"), 2)
        self.assertEqual(a[0], "a")
        self.assertEqual(a[1], "b")
        self.assertEqual(a[2], "c")
        self.assertEqual(a.array_type, uint8)

        a = Enumeration("bca")
        self.assertEqual(a.index("b"), 0)
        self.assertEqual(a.index("c"), 1)
        self.assertEqual(a.index("a"), 2)
        self.assertEqual(a[0], "b")
        self.assertEqual(a[1], "c")
        self.assertEqual(a[2], "a")

        a = Enumeration([1, "2"])
        self.assertEqual(a.index(1), 0)
        self.assertEqual(a.index("2"), 1)
        self.assertRaises(KeyError, a.index, "1")

        # check that it works with gaps
        a = Enumeration("ab-", "-")
        self.assertEqual(a.gap, "-")
        self.assertEqual(a.gap_index, 2)

        a = Enumeration(list(range(257)))  # too big to fit in uint8
        self.assertEqual(a.array_type, uint16)
コード例 #2
0
ファイル: test_alphabet.py プロジェクト: aglucaci/cogent3
 def test_index(self):
     """Enumeration index should return first index of item"""
     a = Enumeration("bca")
     self.assertEqual(a.index("b"), 0)
     self.assertEqual(a.index("c"), 1)
     self.assertEqual(a.index("a"), 2)