コード例 #1
0
def view_task(request, uid, return_context=False):
    task = Task.get(uid)[0]

    # Replace newlines with <br>, etc.
    task["definition"] = clean_html(task["definition"])
    contrasts = Task.get_contrasts(task["id"])

    # Make a lookup dictionary based on concept id
    concept_lookup = dict()
    for contrast in contrasts:
        contrast_concepts = Contrast.get_concepts(contrast["contrast_id"])
        for concept in contrast_concepts:
            concept_lookup = update_lookup(concept_lookup,
                                           concept["concept_id"], contrast)

    # Retrieve conditions, make associations with contrasts
    conditions = Task.get_conditions(uid)

    context = {
        "task": task,
        "concepts": concept_lookup,
        "contrasts": contrasts,
        "conditions": conditions,
        "domain": DOMAIN
    }

    if return_context == True:
        return context
    return render(request, 'atlas/view_task.html', context)
コード例 #2
0
ファイル: test_query.py プロジェクト: rwblair/cogat
 def test_contrast_get_concepts(self):
     contrast = Contrast()
     concepts = contrast.get_concepts(self.cont.properties['id'])
     self.assertEqual(len(concepts), 1)
     self.assertEqual(concepts[0]['concept_id'], self.con.properties['id'])