def initialize(): # pragma: no cover """ Displays graphics from commandline.py and loads runtime parameters, from a tuple, as a dictionary. :return: a dictionary of the runtime parameters """ initializeGraphics() folder, analysis, truth, snp, score, beta, filename, threshold, separ, kt_type, \ kt_type_separ, severity, pvaladjust, covar, savep= checkArgs() args = { 'folder': folder, 'analysis': analysis, 'truth': truth, 'snp': snp, 'score': score, 'beta': beta, 'filename': filename, 'threshold': threshold, 'separ': separ, 'kt_type': kt_type, 'kt_type_separ': kt_type_separ, 'severity': severity, 'pvaladjust': pvaladjust, 'covar': covar, 'savep': savep } return args
def initialize(): """ Displays graphics from commandline.py and loads runtime parameters, from a tuple, as a dictionary. :return: a dictionary of the runtime parameters """ initializeGraphics() folder, analysis, truth, snp, score, beta, filename, threshold, separ, kt_type,\ kt_type_separ, severity = checkArgs() args = {'folder': folder, 'analysis': analysis, 'truth': truth, 'snp': snp, 'score': score, 'beta': beta, 'filename': filename, 'threshold': threshold, 'separ': separ, 'kt_type': kt_type, 'kt_type_separ': kt_type_separ} return args