def set_tablenames(self):
"""
sets the tablenames read from backend_cfg file into a list
"""
if self.backend_cfg is None:
self.backend_cfg = self.obia4rtm_home + os.sep + 'obia4rtm_backend.cfg'
parser = ConfigParser()
try:
parser.read(self.backend_cfg)
except MissingSectionHeaderError:
raise MissingSectionHeaderError('The obia4rtm_backend.cfg does '\
'not fulfil the formal requirements!',
exc_info=True)
sys.exit(-1)
# get the schema name
schema = parser.get('schema-setting', 'schema_obia4rtm')
# read the tablenames
table_names = []
table_names.append(schema + "." +
parser.get('schema-setting', 'table_lookuptabe'))
table_names.append(schema + "." +
parser.get('schema-setting', 'table_inv_results'))
table_names.append(
schema + "." +
parser.get('schema-setting', 'table_object_spectra'))
table_names.append(schema + "." +
parser.get('schema-setting', 'table_inv_mapping'))
self.tablenames = table_names
def _read(self, fp, fpname):
"""Parse a sectioned setup file.
The sections in setup file contains a title line at the top,
indicated by a name in square brackets (`[]'), plus key/value
options lines, indicated by `name: value' format lines.
Continuations are represented by an embedded newline then
leading whitespace. Blank lines, lines beginning with a '#',
and just about everything else are ignored.
"""
cursect = None # None, or a dictionary
optname = None
lineno = 0
e = None # None, or an exception
while True:
line = fp.readline()
if not line:
break
lineno += 1
# comment or blank line?
if line.strip() == '' or line[0] in '#;':
continue
if line.split(None, 1)[0].lower() == 'rem' and line[0] in "rR":
# no leading whitespace
continue
# continuation line?
if line[0].isspace() and cursect is not None and optname:
value = line.strip()
if value:
cursect[optname] = "%s\n%s" % (cursect[optname], value)
# a section header or option header?
else:
# is it a section header?
mo = self.SECTCRE.match(line)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
cursect = self._sections[sectname]
elif sectname == DEFAULTSECT:
cursect = self._defaults
else:
cursect = self._dict()
cursect['__name__'] = sectname
self._sections[sectname] = cursect
# So sections can't start with a continuation line
optname = None
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
mo = self.OPTCRE.match(line)
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value')
if vi in ('=', ':') and ';' in optval:
# ';' is a comment delimiter only if it follows
# a spacing character
pos = optval.find(';')
if pos != -1 and optval[pos - 1].isspace():
optval = optval[:pos]
optval = optval.strip()
# allow empty values
if optval == '""':
optval = ''
optname = self.optionxform(optname.rstrip())
if cursect.get(optname):
if not isinstance(cursect[optname], list):
cursect[optname] = [cursect[optname]]
cursect[optname].append(optval)
else:
cursect[optname] = optval
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
if not e:
e = ParsingError(fpname)
e.append(lineno, repr(line))
# if any parsing errors occurred, raise an exception
if e:
raise e
def _read(self, fp, fpname):
cursect = None # None, or a dictionary
optname = None
lineno = 0
e = None # None, or an exception
while True:
line = fp.readline()
if not line:
break
lineno += 1
# comment or blank line?
if line.strip() == '' or line[0] in '#;':
continue
if line.split(None, 1)[0].lower() == 'rem' and line[0] in "rR":
# no leading whitespace
continue
# continuation line?
if line[0].isspace() and cursect is not None and optname:
value = line.strip()
if value:
cursect[optname].append(value)
# a section header or option header?
else:
# is it a section header?
mo = self.SECTCRE.match(line)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
# we're extending/overriding, we're good
cursect = self._sections[sectname]
elif sectname == DEFAULTSECT:
cursect = self._defaults
else:
cursect = self._dict()
cursect['__name__'] = sectname
self._sections[sectname] = cursect
# So sections can't start with a continuation line
optname = None
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
try:
mo = self._optcre.match(line) # 2.7
except AttributeError:
mo = self.OPTCRE.match(line) # 2.6
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value')
optname = self.optionxform(optname.rstrip())
# We don't want to override.
if optname in cursect:
continue
# This check is fine because the OPTCRE cannot
# match if it would set optval to None
if optval is not None:
if vi in ('=', ':') and ';' in optval:
# ';' is a comment delimiter only if it follows
# a spacing character
pos = optval.find(';')
if pos != -1 and optval[pos - 1].isspace():
optval = optval[:pos]
optval = optval.strip()
# allow empty values
if optval == '""':
optval = ''
cursect[optname] = [optval]
else:
# valueless option handling
cursect[optname] = optval
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
if not e:
e = ParsingError(fpname)
e.append(lineno, repr(line))
# if any parsing errors occurred, raise an exception
if e:
raise e
# join the multi-line values collected while reading
all_sections = [self._defaults]
all_sections.extend(self._sections.values())
for options in all_sections:
for name, val in options.items():
if isinstance(val, list):
options[name] = '\n'.join(val)
def _read(self, fp, fpname):
"""Parse a sectioned configuration file.
Each section in a configuration file contains a header, indicated by
a name in square brackets (`[]`), plus key/value options, indicated by
`name` and `value` delimited with a specific substring (`=` or `:` by
default).
Values can span multiple lines, as long as they are indented deeper
than the first line of the value. Depending on the parser's mode, blank
lines may be treated as parts of multiline values or ignored.
Configuration files may include comments, prefixed by specific
characters (`#` and `;` by default). Comments may appear on their own
in an otherwise empty line or may be entered in lines holding values or
section names.
Note: This method was borrowed from ConfigParser and we keep this
mess here as close as possible to the original messod (pardon
this german pun) for consistency reasons and later upgrades.
"""
self._structure = []
elements_added = set()
cursect = None # None, or a dictionary
sectname = None
optname = None
lineno = 0
indent_level = 0
e = None # None, or an exception
for lineno, line in enumerate(fp, start=1):
comment_start = sys.maxsize
# strip inline comments
inline_prefixes = {p: -1 for p in self._inline_comment_prefixes}
while comment_start == sys.maxsize and inline_prefixes:
next_prefixes = {}
for prefix, index in inline_prefixes.items():
index = line.find(prefix, index + 1)
if index == -1:
continue
next_prefixes[prefix] = index
if index == 0 or (index > 0 and line[index - 1].isspace()):
comment_start = min(comment_start, index)
inline_prefixes = next_prefixes
# strip full line comments
for prefix in self._comment_prefixes:
if line.strip().startswith(prefix):
comment_start = 0
self._add_comment(line) # HOOK
break
if comment_start == sys.maxsize:
comment_start = None
value = line[:comment_start].strip()
if not value:
if self._empty_lines_in_values:
# add empty line to the value, but only if there was no
# comment on the line
if (comment_start is None and cursect is not None
and optname and cursect[optname] is not None):
cursect[optname].append('') # newlines added at join
self.last_item.last_item.add_line(line) # HOOK
else:
# empty line marks end of value
indent_level = sys.maxsize
if comment_start is None:
self._add_space(line)
continue
# continuation line?
first_nonspace = self.NONSPACECRE.search(line)
cur_indent_level = first_nonspace.start() if first_nonspace else 0
if (cursect is not None and optname
and cur_indent_level > indent_level):
cursect[optname].append(value)
self.last_item.last_item.add_line(line) # HOOK
# a section header or option header?
else:
indent_level = cur_indent_level
# is it a section header?
mo = self.SECTCRE.match(value)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
if self._strict and sectname in elements_added:
raise DuplicateSectionError(
sectname, fpname, lineno)
cursect = self._sections[sectname]
elements_added.add(sectname)
else:
cursect = self._dict()
self._sections[sectname] = cursect
elements_added.add(sectname)
# So sections can't start with a continuation line
optname = None
self._add_section(sectname, line) # HOOK
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
mo = self._optcre.match(value)
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value')
if not optname:
e = self._handle_error(e, fpname, lineno, line)
optname = self.optionxform(optname.rstrip())
if (self._strict
and (sectname, optname) in elements_added):
raise DuplicateOptionError(sectname, optname,
fpname, lineno)
elements_added.add((sectname, optname))
# This check is fine because the OPTCRE cannot
# match if it would set optval to None
if optval is not None:
optval = optval.strip()
cursect[optname] = [optval]
else:
# valueless option handling
cursect[optname] = None
self._add_option(optname, vi, optval, line) # HOOK
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
e = self._handle_error(e, fpname, lineno, line)
# if any parsing errors occurred, raise an exception
if e:
raise e
def _read(self, fp, fpname):
"""Parse a sectioned configuration file.
Each section in a configuration file contains a header, indicated by
a name in square brackets (`[]'), plus key/value options, indicated by
`name' and `value' delimited with a specific substring (`=' or `:' by
default).
Values can span multiple lines, as long as they are indented deeper
than the first line of the value. Depending on the parser's mode, blank
lines may be treated as parts of multiline values or ignored.
Configuration files may include comments, prefixed by specific
characters (`#' and `;' by default). Comments may appear on their own
in an otherwise empty line or may be entered in lines holding values or
section names.
This implementation is extended from the original to also accept
.. code:: ini
#include <file or pisa_resource>
or
.. code:: ini
#include <file or pisa_resource> as <section_name>
syntax anywhere in the file, which switches (via
:class:`MutableMultiFileIterator`) to the new file as if it were
in-lined within the original file. The latter syntax also prepends a
section header
.. code:: ini
[section_name]
before the text of the specified file or pisa_resource.
"""
elements_added = set()
cursect = None # None, or a dictionary
sectname = None
optname = None
lineno = 0
indent_level = 0
e = None # None, or an exception
file_iter = MutableMultiFileIterator(fp=fp, fpname=fpname)
self.file_iterators.append(file_iter)
for record in file_iter:
fpname = record['fpname']
lineno = record['lineno']
line = record['line']
comment_start = sys.maxsize
# strip inline comments
inline_prefixes = dict(
(p, -1) for p in self._inline_comment_prefixes)
while comment_start == sys.maxsize and inline_prefixes:
next_prefixes = {}
for prefix, index in inline_prefixes.items():
index = line.find(prefix, index + 1)
if index == -1:
continue
next_prefixes[prefix] = index
if index == 0 or (index > 0 and line[index - 1].isspace()):
comment_start = min(comment_start, index)
inline_prefixes = next_prefixes
# parse #include statement
include_info = self._get_include_info(line)
if include_info:
file_iter.switch_to_file(fpname=include_info['file'])
if include_info['as']:
as_header = '[%s]\n' % include_info['as']
file_iter.switch_to_file(
# Aaron Fienberg
# commented out as part of python3 update
# fp=StringIO(as_header.decode('utf-8'))
fp=StringIO(as_header))
continue
# strip full line comments
for prefix in self._comment_prefixes:
if line.strip().startswith(prefix):
comment_start = 0
break
if comment_start == sys.maxsize:
comment_start = None
value = line[:comment_start].strip()
if not value:
if self._empty_lines_in_values:
# add empty line to the value, but only if there was no
# comment on the line
if (comment_start is None and cursect is not None
and optname and cursect[optname] is not None):
cursect[optname].append('') # newlines added at join
else:
# empty line marks end of value
indent_level = sys.maxsize
continue
# continuation line?
first_nonspace = self.NONSPACECRE.search(line)
cur_indent_level = first_nonspace.start() if first_nonspace else 0
if (cursect is not None and optname
and cur_indent_level > indent_level):
cursect[optname].append(value)
# a section header or option header?
else:
indent_level = cur_indent_level
# is it a section header?
mo = self.SECTCRE.match(value)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
if self._strict and sectname in elements_added:
raise DuplicateSectionError(
sectname, fpname, lineno)
cursect = self._sections[sectname]
elements_added.add(sectname)
elif sectname == self.default_section:
cursect = self._defaults
else:
cursect = self._dict()
self._sections[sectname] = cursect
self._proxies[sectname] = SectionProxy(self, sectname)
elements_added.add(sectname)
# So sections can't start with a continuation line
optname = None
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
mo = self._optcre.match(value)
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value') # pylint: disable=unused-variable
if not optname:
e = self._handle_error(e, fpname, lineno, line)
optname = self.optionxform(optname.rstrip())
if (self._strict
and (sectname, optname) in elements_added):
raise DuplicateOptionError(sectname, optname,
fpname, lineno)
elements_added.add((sectname, optname))
# This check is fine because the OPTCRE cannot
# match if it would set optval to None
if optval is not None:
optval = optval.strip()
cursect[optname] = [optval]
else:
# valueless option handling
cursect[optname] = None
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
e = self._handle_error(e, fpname, lineno, line)
# if any parsing errors occurred, raise an exception
if e:
raise e
self._join_multiline_values()
def _read(self, fp, fpname):
"""Parse a sectioned configuration file.
Each section in a configuration file contains a header, indicated by
a name in square brackets (`[]'), plus key/value options, indicated by
`name' and `value' delimited with a specific substring (`=' or `:' by
default).
Values can span multiple lines, as long as they are indented deeper
than the first line of the value. Depending on the parser's mode, blank
lines may be treated as parts of multiline values or ignored.
Configuration files may include comments, prefixed by specific
characters (`#' and `;' by default). Comments may appear on their own
in an otherwise empty line or may be entered in lines holding values or
section names.
"""
elements_added = set()
cursect = None # None, or a dictionary
sectname = None
optname = None
lineno = 0
indent_level = 0
e = None # None, or an exception
for lineno, line in enumerate(fp, start=1):
comment_start = None
# strip inline comments
for prefix in self._inline_comment_prefixes:
index = line.find(prefix)
if index == 0 or (index > 0 and line[index - 1].isspace()):
comment_start = index
break
# strip full line comments
for prefix in self._comment_prefixes:
if line.strip().startswith(prefix):
comment_start = 0
break
value = line[:comment_start].strip()
if not value:
if self._empty_lines_in_values:
# add empty line to the value, but only if there was no
# comment on the line
if (comment_start is None and cursect is not None
and optname and cursect[optname] is not None):
cursect[optname].append('') # newlines added at join
else:
# empty line marks end of value
indent_level = sys.maxsize
continue
# continuation line?
first_nonspace = self.NONSPACECRE.search(line)
cur_indent_level = first_nonspace.start() if first_nonspace else 0
if (cursect is not None and optname
and cur_indent_level > indent_level):
cursect[optname].append(value)
# a section header or option header?
else:
indent_level = cur_indent_level
# is it a section header?
mo = self.SECTCRE.match(value)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
if self._strict and sectname in elements_added:
raise DuplicateSectionError(
sectname, fpname, lineno)
cursect = self._sections[sectname]
elements_added.add(sectname)
elif sectname == self.default_section:
cursect = self._defaults
else:
cursect = self._dict()
self._sections[sectname] = cursect
self._proxies[sectname] = configparser.SectionProxy(
self, sectname)
elements_added.add(sectname)
# So sections can't start with a continuation line
optname = None
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
mo = self._optcre.match(value)
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value')
if not optname:
e = self._handle_error(e, fpname, lineno, line)
optname = self.optionxform(optname.rstrip())
if (self._strict
and (sectname, optname) in elements_added):
raise configparser.DuplicateOptionError(
sectname, optname, fpname, lineno)
elements_added.add((sectname, optname))
# This check is fine because the OPTCRE cannot
# match if it would set optval to None
if optval is not None:
optval = optval.strip()
# Check if this optname already exists
if (optname in cursect) and (cursect[optname]
is not None):
# If it does, convert it to a tuple if it isn't already one
if not isinstance(cursect[optname], tuple):
cursect[optname] = tuple(cursect[optname])
cursect[optname] = cursect[optname] + tuple(
[optval])
else:
cursect[optname] = [optval]
else:
# valueless option handling
cursect[optname] = None
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
e = self._handle_error(e, fpname, lineno, line)
# if any parsing errors occurred, raise an exception
if e:
raise e
self._join_multiline_values()
def _readfp(self, fp):
cur_section = None
cur_option = None
cur_section_name = None
cur_option_name = None
pending_lines = []
pending_empty_lines = False
try:
fname = fp.name
except AttributeError:
fname = '<???>'
linecount = 0
exc = None
line = None
for line in readline_iterator(fp):
# Check for BOM on first line
if linecount == 0 and isinstance(line, str):
if line[0] == '\ufeff':
line = line[1:]
self._bom = True
lineobj = self._parse(line)
linecount += 1
if not cur_section and not isinstance(
lineobj, (CommentLine, EmptyLine, SectionLine)):
if self._parse_exc:
raise MissingSectionHeaderError(fname, linecount, line)
else:
lineobj = make_comment(line)
if lineobj is None:
if self._parse_exc:
if exc is None: exc = ParsingError(fname)
exc.append(linecount, line)
lineobj = make_comment(line)
if isinstance(lineobj, ContinuationLine):
if cur_option:
if pending_lines:
cur_option.extend(pending_lines)
pending_lines = []
if pending_empty_lines:
optobj._compat_skip_empty_lines.add(
cur_option_name)
pending_empty_lines = False
cur_option.add(lineobj)
else:
# illegal continuation line - convert to comment
if self._parse_exc:
if exc is None: exc = ParsingError(fname)
exc.append(linecount, line)
lineobj = make_comment(line)
if isinstance(lineobj, OptionLine):
if pending_lines:
cur_section.extend(pending_lines)
pending_lines = []
pending_empty_lines = False
cur_option = LineContainer(lineobj)
cur_section.add(cur_option)
if self._optionxform:
cur_option_name = self._optionxform(cur_option.name)
else:
cur_option_name = cur_option.name
if cur_section_name == DEFAULTSECT:
optobj = self._defaults
else:
optobj = self._sections[cur_section_name]
optobj._options[cur_option_name] = cur_option
if isinstance(lineobj, SectionLine):
self._data.extend(pending_lines)
pending_lines = []
pending_empty_lines = False
cur_section = LineContainer(lineobj)
self._data.add(cur_section)
cur_option = None
cur_option_name = None
if cur_section.name == DEFAULTSECT:
self._defaults._lines.append(cur_section)
cur_section_name = DEFAULTSECT
else:
if self._sectionxform:
cur_section_name = self._sectionxform(cur_section.name)
else:
cur_section_name = cur_section.name
if cur_section_name not in self._sections:
self._sections[cur_section_name] = \
INISection(cur_section, defaults=self._defaults,
optionxformsource=self)
else:
self._sections[cur_section_name]._lines.append(
cur_section)
if isinstance(lineobj, (CommentLine, EmptyLine)):
pending_lines.append(lineobj)
if isinstance(lineobj, EmptyLine):
pending_empty_lines = True
self._data.extend(pending_lines)
if line and line[-1] == '\n':
self._data.add(EmptyLine())
if exc:
raise exc
def _read(self, fp, fpname):
"""Parse a sectioned setup file.
The sections in setup file contains a title line at the top,
indicated by a name in square brackets (`[]'), plus key/value
options lines, indicated by `name: value' format lines.
Continuations are represented by an embedded newline then
leading whitespace. Blank lines, lines beginning with a '#',
and just about everything else are ignored.
"""
cursect = None # None, or a dictionary
optname = None
lineno = 0
e = None # None, or an exception
while True:
line = fp.readline()
line = line.replace(
'%', '%%'
) # python 3 uses % as system symbol, if it is double percent "%%" it automatically replaces to "%"
if not line:
break
lineno = lineno + 1
# comment or blank line?
if line.strip() == '' or line[0] in '#;':
continue
if line.split(None, 1)[0].lower() == 'rem' and line[0] in "rR":
# no leading whitespace
continue
# continuation line?
if line[0].isspace() and cursect is not None and optname:
value = line.strip('\n')
if value:
cursect[optname].append(value)
# a section header or option header?
else:
# is it a section header?
mo = self.SECTCRE.match(line)
if mo:
sectname = mo.group('header')
if sectname in self._sections:
cursect = self._sections[sectname]
elif sectname == DEFAULTSECT:
cursect = self._defaults
else:
cursect = self._dict()
cursect['__name__'] = sectname
self._sections[sectname] = cursect
# So sections can't start with a continuation line
optname = None
# no section header in the file?
elif cursect is None:
raise MissingSectionHeaderError(fpname, lineno, line)
# an option line?
else:
mo = self._optcre.match(line)
if mo:
optname, vi, optval = mo.group('option', 'vi', 'value')
optname = self.optionxform(optname.rstrip())
# This check is fine because the OPTCRE cannot
# match if it would set optval to None
if optval is not None:
if vi in ('=', ':') and ';' in optval:
# ';' is a comment delimiter only if it follows
# a spacing character
pos = optval.find(';')
if pos != -1 and optval[pos - 1].isspace():
optval = optval[:pos]
optval = optval.strip()
# allow empty values
if optval == '""':
optval = ''
cursect[optname] = [optval]
else:
# valueless option handling
cursect[optname] = optval
else:
# a non-fatal parsing error occurred. set up the
# exception but keep going. the exception will be
# raised at the end of the file and will contain a
# list of all bogus lines
if not e:
e = ParsingError(fpname)
e.append(lineno, repr(line))
# if any parsing errors occurred, raise an exception
if e:
raise e
# join the multi-line values collected while reading
all_sections = [self._defaults]
all_sections.extend(list(self._sections.values()))
for options in all_sections:
for name, val in options.items():
if isinstance(val, list):
options[name] = '\n'.join(val)
