def get_average(file, points, radius=40):
'''Like get_values, but computes the average value within a circle of the
specified radius (in km).
Missing values are ignored. Returns None if there were no values within the
circle.
>>> lat_lons = [(10,10), (20,20), (0,0)]
>>> [type(x) for x in get_average('bio1', lat_lons, 0)]
[<type 'float'>, <type 'float'>, <type 'NoneType'>]
>>> get_average('bio1', lat_lons, 100) != get_average('bio1', lat_lons, 50) != get_average('bio1', lat_lons, 0)
True
'''
data, no_value, ul, dims, size = extract_attributes(file)
result = []
for point in points:
within = points_within_distance(*(point + ul + dims), radius=radius)
raster_positions = [
xy_coords(lat, lon, *(ul + dims)) for (lat, lon) in within
]
values = [
get_point(data, pos[0], pos[1], no_value)
for pos in raster_positions
]
values = [v for v in values if not v is None]
if len(values) == 0: result.append(None)
else:
result.append(sum(values) / float(len(values)))
return result
def get_average(file, points, radius=40):
'''Like get_values, but computes the average value within a circle of the
specified radius (in km).
Missing values are ignored. Returns None if there were no values within the
circle.
>>> lat_lons = [(10,10), (20,20), (0,0)]
>>> [type(x) for x in get_average('bio1', lat_lons, 0)]
[<type 'float'>, <type 'float'>, <type 'NoneType'>]
>>> get_average('bio1', lat_lons, 100) != get_average('bio1', lat_lons, 50) != get_average('bio1', lat_lons, 0)
True
'''
data, no_value, ul, dims, size = extract_attributes(file)
result = []
for point in points:
within = points_within_distance(*(point + ul + dims), radius=radius)
raster_positions = [xy_coords(lat, lon, *(ul + dims)) for (lat, lon) in within]
values = [get_point(data, pos[0], pos[1], no_value)
for pos in raster_positions]
values = [v for v in values if not v is None]
if len(values) == 0: result.append(None)
else:
result.append(sum(values)/float(len(values)))
return result
def get_spatial_variance(file, points, radius=40):
'''Like get_values, but computes the spatial variance within a circle of the
specified radius (in km).
Missing values are ignored. Returns None if there were no values within the
circle.
>>> lat_lons = [(10,10), (20,20), (0,0)]
>>> get_spatial_variance('bio1', lat_lons, 0)
[0.0, 0.0, None]
>>> (get_spatial_variance('bio1', lat_lons[0:1], 100) >=
... get_spatial_variance('bio1', lat_lons[0:1], 50) >=
... get_spatial_variance('bio1', lat_lons[0:1], 0))
True
'''
data, no_value, ul, dims, size = extract_attributes(file)
result = []
for point in points:
# because the distance between longitude points approaches 0 at the
# poles, only compute variance between 60 N and 60 S
if abs(point[0]) > 60:
result.append(None)
continue
within = points_within_distance(*(point + ul + dims), radius=radius)
raster_positions = [
xy_coords(lat, lon, *(ul + dims)) for (lat, lon) in within
]
values = [
get_point(data, pos[0], pos[1], no_value)
for pos in raster_positions
]
values = [v for v in values if not v is None]
if len(values) == 0: result.append(None)
else:
result.append(float(np.var(values)))
return result
def get_spatial_variance(file, points, radius=40):
'''Like get_values, but computes the spatial variance within a circle of the
specified radius (in km).
Missing values are ignored. Returns None if there were no values within the
circle.
>>> lat_lons = [(10,10), (20,20), (0,0)]
>>> get_spatial_variance('bio1', lat_lons, 0)
[0.0, 0.0, None]
>>> (get_spatial_variance('bio1', lat_lons[0:1], 100) >=
... get_spatial_variance('bio1', lat_lons[0:1], 50) >=
... get_spatial_variance('bio1', lat_lons[0:1], 0))
True
'''
data, no_value, ul, dims, size = extract_attributes(file)
result = []
for point in points:
# because the distance between longitude points approaches 0 at the
# poles, only compute variance between 60 N and 60 S
if abs(point[0]) > 60:
result.append(None)
continue
within = points_within_distance(*(point + ul + dims), radius=radius)
raster_positions = [xy_coords(lat, lon, *(ul + dims)) for (lat, lon) in within]
values = [get_point(data, pos[0], pos[1], no_value)
for pos in raster_positions]
values = [v for v in values if not v is None]
if len(values) == 0: result.append(None)
else:
result.append(float(np.var(values)))
return result