def test_adapter_cutter(): from cutadapt.adapters import BackAdapter a1 = BackAdapter("GTAGTCCCGC") a2 = BackAdapter("GTAGTCCCCC") match = AdapterCutter.best_match([a1, a2], Sequence("name", "ATACCCCTGTAGTCCCC")) assert match.adapter is a2
def test_adapter_cutter(): from cutadapt.adapters import SingleAdapter, Where a1 = SingleAdapter('GTAGTCCCGC', where=Where.BACK) a2 = SingleAdapter('GTAGTCCCCC', where=Where.BACK) match = AdapterCutter.best_match([a1, a2], Sequence("name", "ATACCCCTGTAGTCCCC")) assert match.adapter is a2