コード例 #1
0
    def properties(self):
        """
        Translate an amino acid sequence to properties of the form:
        'F': HYDROPHOBIC | AROMATIC.

        @return: A generator yielding properties for the residues in the
            current sequence.
        """
        return (PROPERTIES.get(aa, NONE) for aa in self.sequence)
コード例 #2
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ファイル: reads.py プロジェクト: akifoss/dark-matter
    def properties(self):
        """
        Translate an amino acid sequence to properties of the form:
        'F': HYDROPHOBIC | AROMATIC.

        @return: A generator yielding properties for the residues in the
            current sequence.
        """
        return (PROPERTIES.get(aa, NONE) for aa in self.sequence)
コード例 #3
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 def testCorrectAAs(self):
     """
     The PROPERTIES dict must have the correct AA keys.
     """
     self.assertEqual(AA_LETTERS, sorted(PROPERTIES.keys()))
コード例 #4
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ファイル: test_aa.py プロジェクト: bamueh/dark-matter
 def testCorrectAAs(self):
     """
     The PROPERTIES dict must have the correct AA keys.
     """
     self.assertEqual(AA_LETTERS, sorted(PROPERTIES.keys()))