def translateVistrail(_vistrail): def update_key(old_obj, translate_dict): return '__notes__' def update_annotation(old_obj, translate_dict): new_dict = {'DBAnnotation': {'key': update_key}} new_list = [] for annotation in old_obj.db_annotations: if annotation.db_key == 'notes': new_list.append(DBAnnotation.update_version(annotation, new_dict)) else: new_list.append(DBAnnotation.update_version(annotation, {})) return new_list def update_session(old_obj, translate_dict): if not old_obj.db_session: session = None else: session = long(old_obj.db_session) return session def update_workflow(old_obj, translate_dict): return DBWorkflow.update_version(old_obj.db_workflow, translate_dict) translate_dict = {'DBAction': {'annotations': update_annotation, 'session': update_session}, 'DBGroup': {'workflow': update_workflow}} # pass DBVistrail because domain contains enriched version of the auto_gen vistrail = DBVistrail.update_version(_vistrail, translate_dict) vistrail.db_version = '0.9.3' return vistrail
def translateVistrail(_vistrail): def update_workflow(old_obj, translate_dict): return DBWorkflow.update_version(old_obj.db_workflow, translate_dict, DBWorkflow()) translate_dict = {'DBGroup': {'workflow': update_workflow}} # pass DBVistrail because domain contains enriched version of the auto_gen vistrail = DBVistrail.update_version(_vistrail, translate_dict) vistrail.db_version = '0.9.3' return vistrail
def translateVistrail(_vistrail): vistrail = DBVistrail() for _action in _vistrail.db_actions: ops = [] for op in _action.db_operations: if op.vtType == 'add': data = convert_data(op.db_data) ops.append(DBAdd(id=op.db_id, what=op.db_what, objectId=op.db_objectId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType, data=data)) elif op.vtType == 'change': data = convert_data(op.db_data) ops.append(DBChange(id=op.db_id, what=op.db_what, oldObjId=op.db_oldObjId, newObjId=op.db_newObjId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType, data=data)) elif op.vtType == 'delete': ops.append(DBDelete(id=op.db_id, what=op.db_what, objectId=op.db_objectId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType)) annotations = [] for annotation in _action.db_annotations: annotations.append(DBAnnotation(id=annotation.db_id, key=annotation.db_key, value=annotation.db_value)) session = _action.db_session if not session: session = None else: session = long(_action.db_session) action = DBAction(id=_action.db_id, prevId=_action.db_prevId, date=_action.db_date, user=_action.db_user, prune=_action.db_prune, session=session, operations=ops, annotations=annotations) vistrail.db_add_action(action) for _tag in _vistrail.db_tags: tag = DBTag(id=_tag.db_id, name=_tag.db_name) vistrail.db_add_tag(tag) vistrail.db_version = '0.9.3' return vistrail
def translateVistrail(_vistrail): vistrail = DBVistrail() for _action in _vistrail.db_actions: ops = [] for op in _action.db_operations: if op.vtType == 'add': data = convert_data(op.db_data) ops.append(DBAdd(id=op.db_id, what=op.db_what, objectId=op.db_objectId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType, data=data)) elif op.vtType == 'change': data = convert_data(op.db_data) ops.append(DBChange(id=op.db_id, what=op.db_what, oldObjId=op.db_oldObjId, newObjId=op.db_newObjId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType, data=data)) elif op.vtType == 'delete': ops.append(DBDelete(id=op.db_id, what=op.db_what, objectId=op.db_objectId, parentObjId=op.db_parentObjId, parentObjType=op.db_parentObjType)) annotations = [] for annotation in _action.db_annotations: key = annotation.db_key if key == 'notes': key = '__notes__' annotations.append(DBAnnotation(id=annotation.db_id, key=key, value=annotation.db_value)) session = _action.db_session if not session: session = None else: session = _action.db_session action = DBAction(id=_action.db_id, prevId=_action.db_prevId, date=_action.db_date, user=_action.db_user, prune=_action.db_prune, session=session, operations=ops, annotations=annotations) vistrail.db_add_action(action) for _tag in _vistrail.db_tags: tag = DBTag(id=_tag.db_id, name=_tag.db_name) vistrail.db_add_tag(tag) vistrail.db_version = '0.9.3' return vistrail
def translateVistrail(_vistrail): def update_key(old_obj, translate_dict): return '__notes__' def update_annotation(old_obj, translate_dict): new_dict = {'DBAnnotation': {'key': update_key}} new_list = [] for annotation in old_obj.db_annotations: if annotation.db_key == 'notes': new_list.append( DBAnnotation.update_version(annotation, new_dict)) else: new_list.append(DBAnnotation.update_version(annotation, {})) return new_list def update_session(old_obj, translate_dict): if not old_obj.db_session: session = None else: session = long(old_obj.db_session) return session def update_workflow(old_obj, translate_dict): return DBWorkflow.update_version(old_obj.db_workflow, translate_dict) translate_dict = { 'DBAction': { 'annotations': update_annotation, 'session': update_session }, 'DBGroup': { 'workflow': update_workflow } } # pass DBVistrail because domain contains enriched version of the auto_gen vistrail = DBVistrail.update_version(_vistrail, translate_dict) vistrail.db_version = '0.9.3' return vistrail