コード例 #1
0
ファイル: managed_predictors.py プロジェクト: hattne/dials
    def _predict_one_experiment(self, experiment, reflections):

        # scan-varying
        if "ub_matrix" in reflections:
            predictor = sv(experiment)
            UB = reflections["ub_matrix"]
            s0 = reflections["s0_vector"]
            dmat = reflections["d_matrix"]
            Smat = reflections["S_matrix"]
            predictor.for_reflection_table(reflections, UB, s0, dmat, Smat)
        # scan static
        else:
            predictor = sc(experiment)
            UB = experiment.crystal.get_A()
            predictor.for_reflection_table(reflections, UB)
コード例 #2
0
    def __call__(self, reflections):
        """Predict for all reflections at the current model geometry"""

        if self._force_stills:
            predictors = [st(e, spherical_relp=self._spherical_relp) \
                                for e in self._experiments]
        else:
            predictors = [
                sc(e)
                if e.goniometer else st(e, spherical_relp=self._spherical_relp)
                for e in self._experiments
            ]
        self._UBs = [
            e.crystal.get_U() * e.crystal.get_B() for e in self._experiments
        ]

        for iexp, e in enumerate(self._experiments):

            # select the reflections for this experiment only
            sel = reflections['id'] == iexp
            refs = reflections.select(sel)

            # stills
            if not e.goniometer or self._force_stills:
                predictor = st(e, spherical_relp=self._spherical_relp)
                UB = e.crystal.get_A()
                predictor.for_reflection_table(refs, UB)
            # scan-varying
            elif 'ub_matrix' in refs:
                predictor = sv(e)
                UB = refs['ub_matrix']
                s0 = refs['s0_vector']
                dmat = refs['d_matrix']
                predictor.for_reflection_table(refs, UB, s0, dmat)
            # scan static
            else:
                predictor = sc(e)
                UB = e.crystal.get_A()
                predictor.for_reflection_table(refs, UB)

            # write predictions back to overall reflections
            reflections.set_selected(sel, refs)

        return reflections
コード例 #3
0
ファイル: managed_predictors.py プロジェクト: dials/dials
  def __call__(self, reflections):
    """Predict for all reflections at the current model geometry"""

    if self._force_stills:
      predictors = [st(e, spherical_relp=self._spherical_relp) \
                          for e in self._experiments]
    else:
      predictors = [sc(e) if e.goniometer else st(e,
        spherical_relp=self._spherical_relp) for e in self._experiments]
    self._UBs = [e.crystal.get_U() * e.crystal.get_B() for e in self._experiments]

    for iexp, e in enumerate(self._experiments):

      # select the reflections for this experiment only
      sel = reflections['id'] == iexp
      refs = reflections.select(sel)

      # stills
      if not e.goniometer or self._force_stills:
        predictor = st(e, spherical_relp=self._spherical_relp)
        UB = e.crystal.get_A()
        predictor.for_reflection_table(refs, UB)
      # scan-varying
      elif 'ub_matrix' in refs:
        predictor = sv(e)
        UB = refs['ub_matrix']
        s0 = refs['s0_vector']
        dmat = refs['d_matrix']
        predictor.for_reflection_table(refs, UB, s0, dmat)
      # scan static
      else:
        predictor = sc(e)
        UB = e.crystal.get_A()
        predictor.for_reflection_table(refs, UB)

      # write predictions back to overall reflections
      reflections.set_selected(sel, refs)

    return reflections