コード例 #1
0
def test_all():
    """
    Large test that calls all functions.
    :return: None
    """

    print("Testing all functionality")

    dna_seq1 = dna.convert_to_nodes("ATGCCAATGC")
    dna_seq2 = dna.deletion(dna_seq1, 3, 5)
    dna_seq3 = dna.duplication(dna_seq2, 0, 3)
    dna_seq4 = dna.convert_to_nodes("CC")
    dna_seq5 = dna.insertion(dna_seq3, dna_seq4, 3)
    dna_seq6 = dna.substitution(dna_seq5, 7, "T")
    dna_seq7 = dna.substitution(dna_seq6, 6, "A")

    print(dna.is_match(dna_seq1, dna_seq7), end=" ")

    dna_seq8 = dna.insertion(dna_seq3, dna_seq4, 0)
    dna_seq9 = dna.deletion(dna_seq8, 2, 2)
    dna_seq10 = dna.substitution(dna_seq9, 6, "C")
    dna_seq11 = dna.substitution(dna_seq10, 3, "T")

    print(dna.is_palindrome(dna_seq11), end=" ")

    dna_seq12 = dna.convert_to_nodes("TACG")
    dna_seq13 = dna.duplication(dna_seq12, 0, 4)
    dna_seq14 = dna.duplication(dna_seq13, 3, 1)
    dna_seq15 = dna.duplication(dna_seq14, 5, 1)

    print(dna.is_pairing(dna_seq1, dna_seq15), end=" ")

    print(dna.convert_to_string(dna_seq11) == "CCGTTGCC")
コード例 #2
0
def test5():
    """
    Tests is_palindrome function.
    :return: None
    """

    print("Test5: testing is_palindrome")

    dna_seq = None
    print(dna.is_palindrome(dna_seq) == True, end=" ")

    dna_seq = linked_code.insert_at(0, "A", dna_seq)
    print(dna.is_palindrome(dna_seq) == True, end=" ")

    dna_seq = linked_code.insert_at(0, "T", dna_seq)
    print(dna.is_palindrome(dna_seq) == False, end=" ")

    dna_seq = linked_code.remove_at(0, dna_seq)
    dna_seq = linked_code.insert_at(0, "A", dna_seq)
    print(dna.is_palindrome(dna_seq) == True, end=" ")

    dna_seq = linked_code.insert_at(1, "G", dna_seq)
    print(dna.is_palindrome(dna_seq) == True, end=" ")

    dna_seq = linked_code.insert_at(2, "T", dna_seq)
    print(dna.is_palindrome(dna_seq) == False)