import os,datetime
from download import download
from download import get_parser
class ebola_download(download):
def __init__(self, **kwargs):
download.__init__(self, **kwargs)
if __name__=="__main__":
parser = get_parser()
args = parser.parse_args()
fasta_fields = ['strain', 'virus', 'accession', 'collection_date', 'region',
'country', 'division', 'location', 'source', 'locus', 'authors', 'url', 'title']
args.fasta_fields = fasta_fields
current_date = str(datetime.datetime.strftime(datetime.datetime.now(),'%Y_%m_%d'))
if args.fstem is None:
args.fstem = args.virus + '_' + current_date
if not os.path.isdir(args.path):
os.makedirs(args.path)
connfluVDB = ebola_download(**args.__dict__)
connfluVDB.download(**args.__dict__)
import os,datetime
from download import download
from download import get_parser
class zika_download(download):
def __init__(self, **kwargs):
download.__init__(self, **kwargs)
if __name__=="__main__":
parser = get_parser()
args = parser.parse_args()
fasta_fields = ['strain', 'virus', 'accession', 'collection_date', 'region',
'country', 'division', 'location', 'source', 'locus', 'authors']
args.fasta_fields = fasta_fields
current_date = str(datetime.datetime.strftime(datetime.datetime.now(),'%Y_%m_%d'))
if args.fstem is None:
args.fstem = args.virus + '_' + current_date
if not os.path.isdir(args.path):
os.makedirs(args.path)
connfluVDB = zika_download(**args.__dict__)
connfluVDB.download(**args.__dict__)