def __call__(self, imageset):
"""
Override the parameters
"""
from dxtbx.imageset import ImageSequence, ImageSetFactory
from dxtbx.model import BeamFactory
from dxtbx.model import DetectorFactory
from dxtbx.model import GoniometerFactory
from dxtbx.model import ScanFactory
from copy import deepcopy
if self.params.geometry.convert_sequences_to_stills:
imageset = ImageSetFactory.imageset_from_anyset(imageset)
for j in imageset.indices():
imageset.set_scan(None, j)
imageset.set_goniometer(None, j)
if not isinstance(imageset, ImageSequence):
if self.params.geometry.convert_stills_to_sequences:
imageset = self.convert_stills_to_sequence(imageset)
if isinstance(imageset, ImageSequence):
beam = BeamFactory.from_phil(self.params.geometry, imageset.get_beam())
detector = DetectorFactory.from_phil(
self.params.geometry, imageset.get_detector(), beam
)
goniometer = GoniometerFactory.from_phil(
self.params.geometry, imageset.get_goniometer()
)
scan = ScanFactory.from_phil(
self.params.geometry, deepcopy(imageset.get_scan())
)
i0, i1 = scan.get_array_range()
j0, j1 = imageset.get_scan().get_array_range()
if i0 < j0 or i1 > j1:
imageset = self.extrapolate_imageset(
imageset=imageset,
beam=beam,
detector=detector,
goniometer=goniometer,
scan=scan,
)
else:
imageset.set_beam(beam)
imageset.set_detector(detector)
imageset.set_goniometer(goniometer)
imageset.set_scan(scan)
else:
for i in range(len(imageset)):
beam = BeamFactory.from_phil(self.params.geometry, imageset.get_beam(i))
detector = DetectorFactory.from_phil(
self.params.geometry, imageset.get_detector(i), beam
)
goniometer = GoniometerFactory.from_phil(
self.params.geometry, imageset.get_goniometer(i)
)
scan = ScanFactory.from_phil(self.params.geometry, imageset.get_scan(i))
imageset.set_beam(beam, i)
imageset.set_detector(detector, i)
imageset.set_goniometer(goniometer, i)
imageset.set_scan(scan, i)
return imageset
def __call__(self, imageset):
'''
Override the parameters
'''
from dxtbx.imageset import ImageSet
from dxtbx.imageset import ImageSweep
from dxtbx.model import BeamFactory
from dxtbx.model import DetectorFactory
from dxtbx.model import GoniometerFactory
from dxtbx.model import ScanFactory
from copy import deepcopy
if self.params.geometry.convert_sweeps_to_stills:
imageset = ImageSet(reader=imageset.reader())
if not isinstance(imageset, ImageSweep):
if self.params.geometry.convert_stills_to_sweeps:
imageset = self.convert_stills_to_sweep(imageset)
if isinstance(imageset, ImageSweep):
beam = BeamFactory.from_phil(
self.params.geometry,
imageset.get_beam())
detector = DetectorFactory.from_phil(
self.params.geometry,
imageset.get_detector(),
beam)
goniometer = GoniometerFactory.from_phil(
self.params.geometry,
imageset.get_goniometer())
scan = ScanFactory.from_phil(
self.params.geometry,
deepcopy(imageset.get_scan()))
i0, i1 = scan.get_array_range()
j0, j1 = imageset.get_scan().get_array_range()
imageset.set_beam(beam)
imageset.set_detector(detector)
imageset.set_goniometer(goniometer)
imageset.set_scan(scan)
else:
for i in range(len(imageset)):
beam = BeamFactory.from_phil(
self.params.geometry,
imageset.get_beam(i))
detector = DetectorFactory.from_phil(
self.params.geometry,
imageset.get_detector(i),
beam)
goniometer = GoniometerFactory.from_phil(
self.params.geometry,
imageset.get_goniometer(i))
scan = ScanFactory.from_phil(
self.params.geometry,
imageset.get_scan(i))
imageset.set_beam(beam, i)
imageset.set_detector(detector, i)
imageset.set_goniometer(goniometer, i)
imageset.set_scan(scan, i)
return imageset
