def test2(): @reaction_rules def rulegen(): (A(bs) + B(bs) > A(bs^1).B(bs^1) | ExcludeReactants(1, B) | ExcludeReactants(2, A)) rules = rulegen() print generate_reactions( [create_species("A(bs1, bs2, bs=(bs1, bs2))"), create_species("B(bs1, bs3, bs=(bs1, bs3))")], rules)[0]
def test4(): @reaction_rules def rulegen(): A(_1=u,ps=(_1,)) + A(_1=u,ps=(_1,)) > A(_1=u^1,ps=(_1,)).A(_1=u^1,ps=(_1,)) rules = rulegen() print generate_reactions( [create_species("A(ps1=u,ps2=u,ps3=u,ps=(ps1,ps2,ps3))")], rules, max_iter=1)[0]
def test3(): @reaction_rules def rulegen(): # _(ps=u) > _(ps=p) # _(_1=u) > _(_1=p) # A(ps1=u) > A(ps1=p) # A(ps1=u,ps=(ps1,ps2)) > A(ps1=p,ps=(ps1,ps2)) # A(_1=u,ps=(_1,_)) > A(_1=p,ps=(_1,_)) A(_1=u,_2=u,ps=(_1,_2)) > A(_1=p,_2=u,ps=(_1,_2)) rules = rulegen() print generate_reactions( [create_species("A(ps1=u,ps=(ps1,))")], rules)[0] print generate_reactions( [create_species("A(ps1=u,ps2=u,ps=(ps1,ps2))")], rules)[0] print generate_reactions( [create_species("A(ps1=u,ps2=u,ps3=u,ps=(ps1,ps2,ps3))")], rules)[0]
def test1(): @reaction_rules def rulegen(): _(ps=u) > _(ps=p) _1(bs) + _1(bs) > _1(bs^1)._1(bs^1) # (_(ps=u) + K(bs) == _(ps=u^1).K(bs^1) | ExcludeReactants(1, K) # > _(ps=p) + K(bs)) rules = rulegen() print generate_reactions( [create_species("K(bs)"), create_species("A(ps=u)")], rules)[0] print generate_reactions( [create_species("K(bs)"), create_species("A(ps1=u,ps2=u)")], rules)[0] print generate_reactions( [create_species("K(bs)"), create_species("A(ps1=u,ps2=u,ps=(ps1,ps2))")], rules)[0] print generate_reactions( [create_species("K(bs)"), create_species("A(ps1=u,ps2=u,ps=(ps1,ps2),bs=(ps1,))")], rules)[0]