def test_cascading_deletion_of_analyses(self, total_analyses=5):
"""Delete a Dataset and make sure its Analyses are removed from
the UI as well"""
# Create sample Data
make_analyses_with_single_dataset(total_analyses, self.user)
wait_until_id_clickable(self.browser, "total-datasets", MAX_WAIT)
assert_text_within_id(self.browser, "total-datasets", MAX_WAIT,
"{} data sets".format(1))
wait_until_id_clickable(self.browser, "total-analyses", MAX_WAIT)
assert_text_within_id(self.browser, "total-analyses", MAX_WAIT,
"{} analyses".format(total_analyses))
self.browser.find_elements_by_class_name('dataset-delete')[0].click()
wait_until_id_clickable(self.browser, 'dataset-delete-button',
MAX_WAIT).click()
# Make sure that there are no more Analyses left after the One
# Dataset is deleted
wait_until_id_clickable(self.browser, "total-analyses", MAX_WAIT)
assert_text_within_id(self.browser, "total-analyses", MAX_WAIT,
"{} analysis".format(0))
wait_until_id_clickable(self.browser, "total-datasets", MAX_WAIT)
assert_text_within_id(self.browser, "total-datasets", MAX_WAIT,
"{} data sets".format(0))
def test_get_analysis(self):
make_analyses_with_single_dataset(1, self.user)
analysis = Analysis.objects.all()[0]
node_with_analysis = Node.objects.create(assay=self.assay,
study=self.study,
analysis_uuid=analysis.uuid)
self.assertEqual(node_with_analysis.get_analysis(), analysis)
def setUp(self):
self.request_factory = RequestFactory()
self.username = '******'
self.password = '******'
self.user = User.objects.create_user(self.username, '', self.password)
self.user.id = 1
make_analyses_with_single_dataset(1, self.user)
self.analysis = Analysis.objects.all()[0]
self.view_root = "/analysis_manager/run/"
def setUp(self):
self.username = '******'
self.password = '******'
self.user = User.objects.create_user(self.username, '', self.password)
make_analyses_with_single_dataset(1, self.user)
self.analysis = Analysis.objects.all()[0]
self.analysis_status = AnalysisStatus.objects.create(
analysis=self.analysis)
self.dataset = DataSet.objects.all()[0]
def _create_analysis_node_connection(self, direction, is_refinery_file):
user = User.objects.create_user("test", "", "test")
make_analyses_with_single_dataset(1, user)
AnalysisNodeConnection.objects.create(
analysis=Analysis.objects.first(),
node=self.node,
direction=direction,
step=1,
name="{} Analysis Node Connection".format(direction),
filename="test.txt",
is_refinery_file=is_refinery_file)
def test_analysis_deletion(self, total_analyses=2):
"""Delete some analyses and make sure the UI updates properly"""
# Create sample Data
make_analyses_with_single_dataset(total_analyses, self.user)
wait_until_id_visible(self.browser, "total-datasets", MAX_WAIT)
assert_text_within_id(self.browser, "total-datasets", MAX_WAIT,
"{} data sets".format(1))
assert_text_within_id(self.browser, "total-analyses",
"{} analyses".format(total_analyses))
delete_from_ui(self.browser, "analysis", total_analyses)
def setUp(self):
self.username = '******'
self.password = '******'
self.user = User.objects.create_user(self.username, '', self.password)
analyses, self.dataset = make_analyses_with_single_dataset(
1, self.user)
self.analysis = analyses[0]
self.analysis_status = AnalysisStatus.objects.get(
analysis=self.analysis)
def test_data_set_preview(self):
"""Test DataSet Preview"""
# Create sample Data & refresh page
make_analyses_with_single_dataset(5, self.user)
wait_until_class_visible(self.browser, "title", MAX_WAIT)
self.browser.find_elements_by_class_name("title")[0].click()
search_array = [
"SUMMARY",
"Description",
"Number of files (total file size)",
"Owner",
"ANALYSES",
"REFERENCES",
"PROTOCOLS",
]
for item in Analysis.objects.filter(name__startswith="Test Analysis"):
search_array.append(item.name)
assert_body_text(self.browser, search_array)
def test_that_analysis_404s_are_handled(self, total_analyses=5):
"""Test use case where Analysis objects are deleted (for example by an
admin, or a user inbetween multiple windows) while a user is about to
delete said object(s) themselves, User should receive a "Not Found"
message"""
# Create sample Data
make_analyses_with_single_dataset(total_analyses, self.user)
wait_until_id_clickable(self.browser, "total-datasets", MAX_WAIT)
assert_text_within_id(self.browser, "total-datasets", MAX_WAIT,
"{} data sets".format(1))
wait_until_id_clickable(self.browser, "total-analyses", MAX_WAIT)
assert_text_within_id(self.browser, "total-analyses", MAX_WAIT,
"{} analyses".format(total_analyses))
# Simulate scenario where objects have been deleted on the backend
Analysis.objects.all().delete()
self.browser.find_elements_by_class_name('analysis-delete')[0].click()
wait_until_id_clickable(self.browser, 'analysis-delete-button',
MAX_WAIT).click()
wait_until_id_clickable(self.browser, "deletion-message-text",
MAX_WAIT)
assert_text_within_id(self.browser, "deletion-message-text", MAX_WAIT,
"not found.")
wait_until_id_clickable(self.browser, 'analysis-delete-close-button',
5).click()
# Ensure that ui displays proper info
wait_until_id_clickable(self.browser, "total-analyses", MAX_WAIT)
assert_text_within_id(self.browser, "total-analyses", MAX_WAIT,
"{} analysis".format(0))
wait_until_id_clickable(self.browser, "total-datasets", MAX_WAIT)
assert_text_within_id(self.browser, "total-datasets", MAX_WAIT,
"{} data sets".format(1))
def setUp(self):
self.username = '******'
self.password = '******'
self.user = User.objects.create_user(self.username, '', self.password)
analyses, self.dataset = make_analyses_with_single_dataset(
1,
self.user
)
self.analysis = analyses[0]
self.analysis_status = AnalysisStatus.objects.get(
analysis=self.analysis
)
