def change_aln_best_to_aln_point():
files = glob.glob("/sternadi/nobackup/volume1/phyVirus/*.aln.best*")
print("going to change %i files" % len(files))
for f in files:
out = ".aln".join(f.split(".aln.best", 1))
change_filename(f, out)
print("Done")
def remove_viridae():
files = glob.glob("/sternadi/nobackup/volume1/phyVirus/*viridae*")
print("going to change %i files" % len(files))
for f in files:
out = "".join(f.split("viridae"))
change_filename(f, out)
print("Done")
def remove_0_():
files = glob.glob("/sternadi/nobackup/volume1/phyVirus/*/*_0_*")
print("going to change %i files" % len(files))
for f in files:
out = ".".join(f.split("_0_", 1))
change_filename(f, out)
print("Done")
def change_phy_aln_to_aln():
# used it already
files = glob.glob("/sternadi/nobackup/volume1/phyVirus/*.phy_aln*")
print("going to change %i files" % len(files))
for f in files:
out = "_aln".join(f.split(".phy_aln"))
change_filename(f, out)
print("Done")