def createRondo(project_id):
json = request.get_json()
json.pop('project_id', None)
json.pop('_project_id', None)
_id = json.get("_id")
if _id:
rondo = Rondo.get(project_id=project_id, id=_id)
rondo.update(**json)
else:
rondo = Rondo(project_id=project_id, **json)
rondo.save()
return jsn(rondo._json)
def adjust_headers(*args, **kwargs):
if request.method == 'OPTIONS':
response = jsn({'message': 'options'})
else:
response = f(*args, **kwargs)
if app.config['CORS']:
response.headers["Access-Control-Allow-Origin"] = '*'
response.headers[
"Access-Control-Allow-Headers"] = "Access-Control-Allow-Headers, Origin,Accept, X-Requested-With, \
Content-Type, Access-Control-Request-Method, Access-Control-Request-Headers, Access-Control-Allow-Origin"
response.headers[
"Access-Control-Allow-Methods"] = 'GET,HEAD,OPTIONS,POST,PUT'
response.headers["Access-Control-Allow-Credentials"] = "true"
response.headers['X-Application-Context'] = 'application'
return response
def flowfile(project_id, rondo_id):
"""
endpoint used for nifi processor. It accepts patient json,
and returns modified json as the flow file.
"""
json = request.get_json()
json.pop('project_id', None)
json.pop('_project_id', None)
patient = Patient.create(_project_id=project_id, **json)
rondo = Rondo.get(project_id=project_id, id=rondo_id)
if rondo.random:
rondo.allocate_random_cohort(patient, force=True)
if patient.cohort:
json["cohort"] = patient.cohort
if patient.pair_id:
json["pair_id"] = patient.pair_id
else:
rondo.match_patient(patient)
if patient.cohort:
json['cohort'] = patient.cohort
return jsn(json)
def getSchema(project_id):
response = omop.get_schema(project_id)
if 'tables' in response:
return jsn({"tables": response['tables']})
else:
return jsn(response)
def getRondo(project_id, config_id):
rondo = Rondo.get(project_id=project_id, id=config_id, json=True)
return jsn(rondo)
def all(project_id):
rondo = Rondo.all(project_id=project_id, json=True)
return jsn(rondo)
def index():
return jsn({'message': 'Hello World!, welcome to Rondo'})
def test():
return jsn({'message': 'Hello World!, welcome to Rondo test'})