def sequence_ids(wormbase_records, output): with open(output, "w") as output_handle: for wormbase_record in Wormbase.parse(open(wormbase_records, "rU")): if wormbase_record.taxid != 6239: continue output_handle.write("%s,%s\n" % ( wormbase_record.geneid, wormbase_record.seqid, ))
def public_names(wormbase_records, output): with open(output, "w") as output_handle: for wormbase_record in Wormbase.parse(open(wormbase_records, "rU")): if wormbase_record.taxid != 6239: continue output_handle.write("%s,%s\n" % ( wormbase_record.geneid, wormbase_record.public_name, ))