def generate_report_json(self,
trans,
invocation,
runtime_report_config_json=None):
"""
"""
workflow_manager = workflows.WorkflowsManager(trans.app)
workflow_encoded_id = trans.app.security.encode_id(
invocation.workflow_id)
workflow = workflow_manager.get_stored_accessible_workflow(
trans, workflow_encoded_id, by_stored_id=False)
internal_markdown = self._generate_internal_markdown(
trans,
invocation,
runtime_report_config_json=runtime_report_config_json)
export_markdown, extra_rendering_data = ready_galaxy_markdown_for_export(
trans, internal_markdown)
rval = {
"render_format":
"markdown", # Presumably the frontend could render things other ways.
"markdown": export_markdown,
"invocation_markdown": export_markdown,
"model_class": "Report",
"id": trans.app.security.encode_id(invocation.workflow_id),
"username": trans.user.username,
"title": workflow.name,
}
rval.update(extra_rendering_data)
return rval
def rewrite_content_for_export(self, trans, as_dict):
content = as_dict["content"]
content_format = as_dict.get("content_format", PageContentFormat.html.value)
if content_format == PageContentFormat.html.value:
processor = PageContentProcessor(trans, placeholderRenderForEdit)
processor.feed(content)
content = unicodify(processor.output(), 'utf-8')
as_dict["content"] = content
elif content_format == PageContentFormat.markdown.value:
content, extra_attributes = ready_galaxy_markdown_for_export(trans, content)
as_dict["content"] = content
as_dict.update(extra_attributes)
else:
raise exceptions.RequestParameterInvalidException(f"content_format [{content_format}] must be either html or markdown")
return as_dict
def generate_report_json(self,
trans,
invocation,
runtime_report_config_json=None):
"""
"""
internal_markdown = self._generate_internal_markdown(
trans,
invocation,
runtime_report_config_json=runtime_report_config_json)
export_markdown, extra_rendering_data = ready_galaxy_markdown_for_export(
trans, internal_markdown)
rval = {
"render_format":
"markdown", # Presumably the frontend could render things other ways.
"markdown": export_markdown,
"invocation_markdown": export_markdown,
}
rval.update(extra_rendering_data)
return rval
def _ready_export(self, example):
return ready_galaxy_markdown_for_export(self.trans, example)
