コード例 #1
0
    def test_conditional_evaluation(self):
        select_xml = XML(
            '''<param name="always_true" type="select"><option value="true">True</option></param>'''
        )
        parameter = SelectToolParameter(self.tool, select_xml)

        conditional = Conditional()
        conditional.name = "c"
        conditional.test_param = parameter
        when = ConditionalWhen()
        when.inputs = {"thresh": self.tool.test_thresh_param()}
        when.value = "true"
        conditional.cases = [when]
        self.tool.set_params({"c": conditional})
        self.job.parameters = [
            JobParameter(
                name="c",
                value=
                '''{"thresh": 4, "always_true": "true", "__current_case__": 0}'''
            )
        ]
        self.tool._command_line = "prog1 --thresh=${c.thresh} --test_param=${c.always_true}"
        self._set_compute_environment()
        command_line, extra_filenames = self.evaluator.build()
        self.assertEquals(command_line, "prog1 --thresh=4 --test_param=true")
コード例 #2
0
ファイル: test_evaluation.py プロジェクト: AAFC-MBB/galaxy-1
    def test_conditional_evaluation( self ):
        select_xml = XML('''<param name="always_true" type="select"><option value="true">True</option></param>''')
        parameter = SelectToolParameter( self.tool, select_xml )

        conditional = Conditional()
        conditional.name = "c"
        conditional.test_param = parameter
        when = ConditionalWhen()
        when.inputs = { "thresh": self.tool.test_thresh_param() }
        when.value = "true"
        conditional.cases = [ when ]
        self.tool.set_params( { "c": conditional } )
        self.job.parameters = [ JobParameter( name="c", value='''{"thresh": 4, "always_true": "true", "__current_case__": 0}''' ) ]
        self.tool._command_line = "prog1 --thresh=${c.thresh} --test_param=${c.always_true}"
        self._set_compute_environment()
        command_line, extra_filenames, _ = self.evaluator.build( )
        self.assertEquals( command_line, "prog1 --thresh=4 --test_param=true" )