コード例 #1
0
    def getRepMap(self, alignment=None):
        if alignment == None:
            alignment = self.alignmentToValidate
        repMap = GenericValidation.getRepMap(self, alignment)
        referenceName = "IDEAL"
        referenceTitle = "IDEAL"
        if not self.referenceAlignment == "IDEAL":
            referenceName = self.referenceAlignment.name
            referenceTitle = self.referenceAlignment.title

        repMap.update({
            "comparedGeometry": (".oO[alignmentName]Oo."
                                 "ROOTGeometry.root"),
            "referenceGeometry":
            "IDEAL",  # will be replaced later
            #  if not compared to IDEAL
            "reference":
            referenceName,
            "referenceTitle":
            referenceTitle,
            "alignmentTitle":
            self.alignmentToValidate.title
        })
        if not referenceName == "IDEAL":
            repMap["referenceGeometry"] = (".oO[reference]Oo."
                                           "ROOTGeometry.root")
        repMap["name"] += "_vs_.oO[reference]Oo."
        return repMap
コード例 #2
0
    def getRepMap(self, alignment = None):
        if alignment == None:
            alignment = self.alignmentToValidate
        repMap = GenericValidation.getRepMap( self, alignment )
        referenceName  = "IDEAL"
        referenceTitle = "IDEAL"
        if not self.referenceAlignment == "IDEAL":
            referenceName  = self.referenceAlignment.name
            referenceTitle = self.referenceAlignment.title

        assert len(self.__compares) == 1 #? not sure how it can be anything else, but just in case
        common = self.__compares.keys()[0]

        repMap.update({
            "common": common,
            "comparedGeometry": (".oO[alignmentName]Oo."
                                 "ROOTGeometry.root"),
            "referenceGeometry": "IDEAL", # will be replaced later
                                          #  if not compared to IDEAL
            "reference": referenceName,
            "referenceTitle": referenceTitle,
	    "alignmentTitle": self.alignmentToValidate.title,
            "moduleListBase": os.path.basename(repMap["moduleList"]),
            })
        if not referenceName == "IDEAL":
            repMap["referenceGeometry"] = (".oO[reference]Oo."
                                           "ROOTGeometry.root")
        repMap["name"] += "_vs_.oO[reference]Oo."
        return repMap
コード例 #3
0
 def getRepMap(self, alignment = None):
     if alignment == None:
         alignment = self.alignmentToValidate
     repMap = GenericValidation.getRepMap( self, alignment )
     referenceName = "IDEAL"
     if not self.referenceAlignment == "IDEAL":
         referenceName = self.referenceAlignment.name
     
     repMap.update({
         "comparedGeometry": (".oO[alignmentName]Oo."
                              "ROOTGeometry.root"),
         "referenceGeometry": "IDEAL", # will be replaced later
                                       #  if not compared to IDEAL
         "reference": referenceName
         })
     if not referenceName == "IDEAL":
         repMap["referenceGeometry"] = (".oO[reference]Oo."
                                        "ROOTGeometry.root")
     repMap["name"] += "_vs_.oO[reference]Oo."
     return repMap