def get_argument_parser():
"""Function to obtain the argument parser.
Returns
-------
A fully configured `argparse.ArgumentParser` object.
Notes
-----
This function is used by the `sphinx-argparse` extension for sphinx.
"""
desc = 'Extract all exon annotations of protein-coding genes.'
parser = get_gtf_argument_parser(desc, default_field_name='exon')
return parser
def get_argument_parser():
"""Function to obtain the argument parser.
Returns
-------
A fully configured `argparse.ArgumentParser` object.
Notes
-----
This function is used by the `sphinx-argparse` extension for sphinx.
"""
desc = 'Extract all exon annotations of protein-coding genes.'
parser = get_gtf_argument_parser(desc, default_field_name = 'exon')
return parser
def get_argument_parser():
"""Function to obtain the argument parser.
Returns
-------
A fully configured `argparse.ArgumentParser` object.
Notes
-----
This function is used by the `sphinx-argparse` extension for sphinx.
"""
desc = 'Extract gene IDs and symbols from Ensembl GTF file.'
parser = get_gtf_argument_parser(desc)
return parser
def get_argument_parser():
"""Function to obtain the argument parser.
Returns
-------
A fully configured `argparse.ArgumentParser` object.
Notes
-----
This function is used by the `sphinx-argparse` extension for sphinx.
"""
desc = 'Extract gene IDs and symbols from Ensembl GTF file.'
parser = get_gtf_argument_parser(desc)
return parser
