def addCircleOverlay(self, circleOverlay, container=True, **attr):
"""Adds and returns fig.Circle for all circles of the given
overlay, using the overlays' color and width."""
if container == True:
container = self.f
circles = circleOverlay.originalCircles
attr = dict(attr)
self._setOverlayColor(circleOverlay, "penColor", attr)
o = self.offset + attr.get('offset', (0, 0))
if self.roi:
o = o - self.roi.begin() # don't modify in-place!
result = fig.Compound(container)
for center, radius in circles:
if self.roi and not self.roi.contains(center + o):
continue
p = intPos(((center[0], center[1]) + o) * self.scale)
dc = fig.Circle(p, radius * self.scale)
for a in attr:
setattr(dc, a, attr[a])
result.append(dc)
return result
def mouseMoved(self, x, y):
if not self._painting: return
# TODO: update overlay
x1, y1 = self.startPos
x, y = intPos((x, y))
self.setROI(
Rect2D(min(x1, x), min(y1, y), max(x1, x)+1, max(y1, y)+1))
def addCircleOverlay(self, circleOverlay, container = True, **attr):
"""Adds and returns fig.Circle for all circles of the given
overlay, using the overlays' color and width."""
if container == True:
container = self.f
circles = circleOverlay.originalCircles
attr = dict(attr)
self._setOverlayColor(circleOverlay, "penColor", attr)
o = self.offset + attr.get('offset', (0,0))
if self.roi:
o = o - self.roi.begin() # don't modify in-place!
result = fig.Compound(container)
for center, radius in circles:
if self.roi and not self.roi.contains(center+o):
continue
p = intPos(((center[0], center[1]) + o) * self.scale)
dc = fig.Circle(p, radius * self.scale)
for a in attr:
setattr(dc, a, attr[a])
result.append(dc)
return result
def addEdge(self, points, simplifyEpsilon = 0.5, container = True,
figClass = fig.Polygon, **attr):
"""fe.addEdge(points, simplifyEpsilon, ...)
Adds and returns exactly one fig.Polygon object representing
the given points. You will probably want to use
addClippedPoly() instead.
If simplifyEpsilon (default: 0.5) is not None, simplifyPolygon
is called on the *scaled* polygon (i.e. the default is to
simplify the polygon to 0.5 fig units, which are integer
anyways)."""
if container == True:
container = self.f
o = self.offset + attr.get('offset', (0,0))
if self.roi:
o -= self.roi.begin()
pp = Polygon([(o + point) * self.scale for point in points])
if simplifyEpsilon:
pp = simplifyPolygon(pp, simplifyEpsilon)
fp = figClass([intPos(v) for v in pp], closed = pp[0] == pp[-1])
for a in attr:
if a != "offset":
setattr(fp, a, attr[a])
container.append(fp)
return fp
def addEdge(self,
points,
simplifyEpsilon=0.5,
container=True,
figClass=fig.Polygon,
**attr):
"""fe.addEdge(points, simplifyEpsilon, ...)
Adds and returns exactly one fig.Polygon object representing
the given points. You will probably want to use
addClippedPoly() instead.
If simplifyEpsilon (default: 0.5) is not None, simplifyPolygon
is called on the *scaled* polygon (i.e. the default is to
simplify the polygon to 0.5 fig units, which are integer
anyways)."""
if container == True:
container = self.f
o = self.offset + attr.get('offset', (0, 0))
if self.roi:
o -= self.roi.begin()
pp = Polygon([(o + point) * self.scale for point in points])
if simplifyEpsilon:
pp = simplifyPolygon(pp, simplifyEpsilon)
fp = figClass([intPos(v) for v in pp], closed=pp[0] == pp[-1])
for a in attr:
if a != "offset":
setattr(fp, a, attr[a])
container.append(fp)
return fp
def addPointCircles(self,
points,
radius,
returnIndices=False,
container=True,
**attr):
"""fe.addPointCircles(points, radius, returnIndices = False,...)
Marks each point in points with a circle of the given radius
(in pixels) if it is within the clipping rect. The list of
fig.Circle objects is returned. Again, note the possibility
of setting properties (depth, penColor, lineStyle, lineWidth,
...) on all resulting objects via keyword arguments
(cf. documentation of the FigExporter class).
By default, circles will be filled, but have lineWidth=0.
To draw a transparent circle, call:
fi.addPointCircles([(5.2,5.3)], 2, penColor=fig.Color.Cyan,fillStyle=fig.FillStyle.None,lineWidth=1)
If returnIndices is set to True (default: False), a list of
(i, c) pairs is returned instead, where c is the fig.Circle
object, and i is the index of the corresponding position in
points."""
if container == True:
container = self.f
attr = dict(attr)
if "fillStyle" not in attr:
attr["fillStyle"] = fig.FillStyle.Solid
if "lineWidth" not in attr and attr["fillStyle"] != fig.FillStyle.None:
attr["lineWidth"] = 0
compound = fig.Compound(container)
if returnIndices:
result = []
else:
result = compound
o = self.offset + attr.get('offset', (0, 0))
o2 = self.roi and o - self.roi.begin() or o
for i, point in enumerate(points):
if self.roi:
radiusOff = (radius, radius)
circleBounds = BoundingBox(o + point - radiusOff,
o + point + radiusOff)
if not self.roi.contains(circleBounds):
continue # FIXME: add arcs if intersects
p = intPos((numpy.array((point[0], point[1])) + o2) * self.scale)
dc = fig.Circle(p, radius * self.scale)
for a in attr:
if a != "offset":
setattr(dc, a, attr[a])
if returnIndices:
result.append((i, dc))
compound.append(dc)
return result
def mouseMoved(self, x, y):
if not self._painting: return
# TODO: update overlay
x1, y1 = self.startPos
x, y = intPos((x, y))
self.setROI(
Rect2D(min(x1, x), min(y1, y),
max(x1, x) + 1,
max(y1, y) + 1))
def addPointCircles(self, points, radius, returnIndices = False, container = True, **attr):
"""fe.addPointCircles(points, radius, returnIndices = False,...)
Marks each point in points with a circle of the given radius
(in pixels) if it is within the clipping rect. The list of
fig.Circle objects is returned. Again, note the possibility
of setting properties (depth, penColor, lineStyle, lineWidth,
...) on all resulting objects via keyword arguments
(cf. documentation of the FigExporter class).
By default, circles will be filled, but have lineWidth=0.
To draw a transparent circle, call:
fi.addPointCircles([(5.2,5.3)], 2, penColor=fig.Color.Cyan,fillStyle=fig.FillStyle.None,lineWidth=1)
If returnIndices is set to True (default: False), a list of
(i, c) pairs is returned instead, where c is the fig.Circle
object, and i is the index of the corresponding position in
points."""
if container == True:
container = self.f
attr = dict(attr)
if "fillStyle" not in attr:
attr["fillStyle"] = fig.FillStyle.Solid
if "lineWidth" not in attr and attr["fillStyle"] != fig.FillStyle.None:
attr["lineWidth"] = 0
compound = fig.Compound(container)
if returnIndices:
result = []
else:
result = compound
o = self.offset + attr.get('offset', (0,0))
o2 = self.roi and o - self.roi.begin() or o
for i, point in enumerate(points):
if self.roi:
radiusOff = (radius, radius)
circleBounds = BoundingBox(
o + point - radiusOff, o + point + radiusOff)
if not self.roi.contains(circleBounds):
continue # FIXME: add arcs if intersects
p = intPos((numpy.array((point[0], point[1])) + o2) * self.scale)
dc = fig.Circle(p, radius*self.scale)
for a in attr:
if a != "offset":
setattr(dc, a, attr[a])
if returnIndices:
result.append((i, dc))
compound.append(dc)
return result
def _calculatePoints(self):
if not self._map():
self._qpointlist = []
return
if self.relativeRadius:
self.radius = int(self._zoom * self.origRadius + 0.5)
d0 = (0.5 * (self._zoom-1) - self.radius,
0.5 * (self._zoom-1) - self.radius)
w = 2 * self.radius + 1
self._elSize = QtCore.QSize(w, w)
self._qpointlist = [None] * self._map().maxNodeLabel()
for node in self._map().nodeIter():
ip = intPos(numpy.array(node.position()) * self._zoom + d0)
self._qpointlist[node.label()] = QtCore.QPoint(ip[0], ip[1])
def _calculatePoints(self):
if not self._map():
self._qpointlist = []
return
if self.relativeRadius:
self.radius = int(self._zoom * self.origRadius + 0.5)
d0 = (0.5 * (self._zoom - 1) - self.radius,
0.5 * (self._zoom - 1) - self.radius)
w = 2 * self.radius + 1
self._elSize = QtCore.QSize(w, w)
self._qpointlist = [None] * self._map().maxNodeLabel()
for node in self._map().nodeIter():
ip = intPos(numpy.array(node.position()) * self._zoom + d0)
self._qpointlist[node.label()] = QtCore.QPoint(ip[0], ip[1])
def mousePressed(self, x, y, button):
if self._painting and button == QtCore.Qt.RightButton:
self._stopPainting()
self.setROI(self._oldROI)
return True
if button != QtCore.Qt.LeftButton or self.activeModifiers():
return False
if self.roi:
mousePos = self._viewer.windowCoordinate(x, y)
wr = self.windowRect()
if (mousePos - wr.topLeft()).manhattanLength() < 9:
self.startPos = self.roi.lowerRight() - (1,1)
elif (mousePos - wr.bottomRight()).manhattanLength() < 9:
self.startPos = self.roi.upperLeft()
else:
self.startPos = intPos((x, y))
else:
self.startPos = intPos((x, y))
self.mouseMoved(x, y)
self._startPainting()
return True
def mousePressed(self, x, y, button):
if self._painting and button == QtCore.Qt.RightButton:
self._stopPainting()
self.setROI(self._oldROI)
return True
if button != QtCore.Qt.LeftButton or self.activeModifiers():
return False
if self.roi:
mousePos = self._viewer.windowCoordinate(x, y)
wr = self.windowRect()
if (mousePos - wr.topLeft()).manhattanLength() < 9:
self.startPos = self.roi.lowerRight() - (1, 1)
elif (mousePos - wr.bottomRight()).manhattanLength() < 9:
self.startPos = self.roi.upperLeft()
else:
self.startPos = intPos((x, y))
else:
self.startPos = intPos((x, y))
self.mouseMoved(x, y)
self._startPainting()
return True
def visibleROI(imageWindow):
viewer = hasattr(imageWindow, "viewer") \
and imageWindow.viewer or imageWindow
return Rect2D(
intPos(viewer.toImageCoordinates(0, 0)),
intPos(viewer.toImageCoordinates(viewer.width(), viewer.height())))
def visibleROI(imageWindow):
viewer = hasattr(imageWindow, "viewer") \
and imageWindow.viewer or imageWindow
return Rect2D(
intPos(viewer.toImageCoordinates(0, 0)),
intPos(viewer.toImageCoordinates(viewer.width(), viewer.height())))
def _postMergeFacesHook(self, survivor):
if self._backgroundMode < 3:
return
if survivor.label():
self._redisplayROIImage(intPos(survivor.boundingBox()))
def _preRemoveBridgeHook(self, dart):
if self._backgroundMode >= 3:
self._bridgeROI = intPos(dart.edge().boundingBox())
return True
def _preRemoveBridgeHook(self, dart):
if self._backgroundMode >= 3:
self._bridgeROI = intPos(dart.edge().boundingBox())
return True
def _postMergeFacesHook(self, survivor):
if self._backgroundMode < 3:
return
if survivor.label():
self._redisplayROIImage(intPos(survivor.boundingBox()))