dy,
name='global',
label='GS512base',
mindepth=None,
dlim=3.0,
drymin=None,
drymax=0.7,
bathytype='gebco',
getpland=True)
# save the grid
basefile = basesmc.writeNC(writedir=writedir)
print('Data written to %s' % basefile)
# visualise the grid
grd.plotGridsmc(basesmc, latlon=False)
##-- load basegrid and remove cells from regions we don't want to compute
if basegridcrop:
print('')
print('*** Loading SMC base grid')
basesmcrm = grd.loadNCsmc(writedir + '/global_GS512base.nc')
# visualise the grid
grd.plotGridsmc(basesmcrm)
print('')
print('*** Cropping the base grid to remove unwanted seas')
basesmcrm.label = 'GS512crop'
basesmcrm.markRegion(87.5, 41.5, 90.7, 43.9,
marker='dry') # inland lake in central asia
basesmcrm.markRegion(62.3, 41.2, 63.8, 42.8,
def runGridgen(cfginfo):
""" Select and run gridgen actions based on .cfg file namelist """
if cfginfo['action'] == 'smcbase':
# generate the base grid
print('')
print('*** Creating SMC base grid')
basesmc = grd.createBasesmc(cfginfo['bathyfile'],
cfginfo['extents'],
cfginfo['dx'],
cfginfo['dy'],
name=cfginfo['name'],
label=cfginfo['label'],
mindepth=cfginfo['mindepth'],
dlim=cfginfo['drydepthlim'],
drymin=cfginfo['drypcmin'],
drymax=cfginfo['drypcmax'],
bathytype=cfginfo['bathytype'],
getpland=cfginfo['getpcland'],
setadj=cfginfo['setadj'])
# write base grid file
basefile = basesmc.writeNC(writedir=cfginfo['workdir'])
# visualize the grid
grd.plotGridsmc(basesmc, latlon=False)
elif cfginfo['action'] == 'mark':
# mark actions run through a loop to allow composite actions
for lp, proc in enumerate(cfginfo['marklist']):
if lp == 0:
# load the parent grid
print('')
print('*** Loading SMC base grid')
basefile = cfginfo[proc]['workdir'] + '/' + cfginfo[proc]['basefile']
basesmc = grd.loadNCsmc(basefile)
print('')
print('*** Marking cells for SMC grid')
# marking actions
if cfginfo[proc]['action'] == 'markdepths':
basesmc.markDepths(cfginfo[proc]['depthlim'],
marker=cfginfo[proc]['markertype'])
elif cfginfo[proc]['action'] == 'markregion':
basesmc.markRegion(cfginfo[proc]['extents'][0],
cfginfo[proc]['extents'][1],
cfginfo[proc]['extents'][2],
cfginfo[proc]['extents'][3],
marker=cfginfo[proc]['markertype'],
depthlim=cfginfo[proc]['depthlim'])
elif cfginfo[proc]['action'] == 'unmark':
basesmc.unmarkCells(marker=cfginfo[proc]['markertype'],
box=[cfginfo[proc]['extents'][0],
cfginfo[proc]['extents'][1],
cfginfo[proc]['extents'][2],
cfginfo[proc]['extents'][3]],
osbox=cfginfo[proc]['osbox'],
thruzero=cfginfo[proc]['thruzero'])
# deldry option removes dry cells as part of unmark action
if cfginfo[proc]['deldry']:
basesmc.delCells(celltype='dry')
if lp == len(cfginfo['marklist'])-1:
# write the marked grid after final marking action
basesmc.label = cfginfo[proc]['label']
markfile = basesmc.writeNC(writedir=cfginfo[proc]['workdir'])
# visualise the new marked grid
grd.plotGridsmc(basesmc)
elif cfginfo['action'] == 'tiergen':
# load the parent grid
print('')
print('*** Loading SMC base grid')
basefile = cfginfo['workdir'] + '/' + cfginfo['basefile']
basesmcrm = grd.loadNCsmc(basefile)
# generate the new tier grid
print('')
print('*** Creating tier for SMC grid')
tiersmc = grd.createTiersmc(cfginfo['bathyfile'],
basesmcrm,
label=cfginfo['label'],
mindepth=cfginfo['mindepth'],
dlim=cfginfo['drydepthlim'],
drymin=cfginfo['drypcmin'],
drymax=cfginfo['drypcmax'],
bathytype=cfginfo['bathytype'],
getpland=cfginfo['getpcland'],
setadj=cfginfo['setadj'],
deldry=cfginfo['deldry'])
# save the new tier grid
tierfile = tiersmc.writeNC(writedir=cfginfo['workdir'])
# visualise the new tier grid
grd.plotGridsmc(tiersmc)
elif cfginfo['action'] == 'tiercombine':
# load the parent grid
print('')
print('*** Loading SMC base grid')
basefile = cfginfo['workdir'] + '/' + cfginfo['basefile']
basesmcrm = grd.loadNCsmc(basefile)
# load the tier
print('')
print('*** Loading SMC tier')
tierfile = cfginfo['workdir'] + '/' + cfginfo['tierfile']
tiersmc = grd.loadNCsmc(tierfile)
# combine the grids
print('')
print('*** Combining tier and base')
combbaset = grd.joinTiersmc(basesmcrm,
tiersmc,
cfginfo['bathyfile'],
tiernext=cfginfo['tiernext'])
combbaset.label = cfginfo['label']
# save the combined grid
combbasetfile = combbaset.writeNC(writedir=cfginfo['workdir'])
# visualise the grid
grd.plotGridsmc(combbaset, latlon=False)
elif cfginfo['action'].lower() == 'writeww3':
# load the grid for writing to ww3 format
print('')
print('*** Loading combined grid')
gridfile = cfginfo['workdir'] + '/' + cfginfo['gridfile']
combsmc = grd.loadNCsmc(gridfile)
# remove any dry cells from the grid
print('')
print('*** Removing dry cells')
combsmc.delCells(celltype='alldry')
# visualize the grid
grd.plotGridsmc(combsmc, latlon=True)
# write out ww3 format files
print('')
print('*** Writing smc cells to text file')
combsmc.sortCells()
combsmc.writeWW3(writedir=cfginfo['writedir'],
mindepth=cfginfo['mindepth'],
writemindepth=cfginfo['writemindepth'],
arctic=cfginfo['arctic'],
arclat=cfginfo['arclat'])
return
gridmk6 = True
chkgrd = False
# set up a dummy bathymtery for testing
bathyfile = '/project/ofrd/bathymetry/gebco_reduced_6.nc'
writedir = '/project/ofrd/waves/wavegrids/atlantic/grid_netCDF'
project = 'atlantic'
#----
# generate the first SMC tier
if gentier:
print('')
print('*** Loading SMC base grid')
basesmcrm = grd.loadNCsmc(writedir+'/atlantic_AS512L1EUK.nc')
# visualise the grid
grd.plotGridsmc(basesmcrm,latlon=False)
print('')
print('*** Creating tier for SMC grid')
tier1smc = grd.createTiersmc(bathyfile, basesmcrm,
label='AS512L2EUK-sub',
mindepth=None, dlim=3.0, drymin=None, drymax=0.7,
bathytype='gebco', getpland=True)
# save the grid
tier1file = tier1smc.writeNC(writedir=writedir)
print('Data written to %s' %tier1file)
# visualise the grid
grd.plotGridsmc(tier1smc)
#---
# combined the (cropped) basegrid and tier1
